Doublet info:
Details
Nucleotide types:
AU
Description:
None: None
Program used:
None
Has errors:
False
Source
PDB id:
3R8S:A1776:A1772
Extra
PDB:
ATOM 1 O3' U A1775 -56.184 -43.154 3.587 1.00 0.01 O
ATOM 2 P A A1776 -56.148 -41.696 4.216 1.00 0.01 P
ATOM 3 OP1 A A1776 -55.244 -40.895 3.405 1.00 0.01 O
ATOM 4 OP2 A A1776 -55.871 -41.848 5.629 1.00 0.01 O
ATOM 5 O5' A A1776 -57.625 -41.211 4.016 1.00 0.01 O
ATOM 6 C5' A A1776 -58.078 -40.815 2.748 1.00 0.01 C
ATOM 7 C4' A A1776 -58.848 -39.538 2.830 1.00 0.01 C
ATOM 8 O4' A A1776 -59.883 -39.673 3.807 1.00 0.01 O
ATOM 9 C3' A A1776 -58.063 -38.333 3.274 1.00 0.01 C
ATOM 10 O3' A A1776 -57.433 -37.711 2.194 1.00 0.01 O
ATOM 11 C2' A A1776 -59.109 -37.457 3.926 1.00 0.01 C
ATOM 12 O2' A A1776 -59.810 -36.732 2.933 1.00 0.01 O
ATOM 13 C1' A A1776 -60.060 -38.477 4.511 1.00 0.01 C
ATOM 14 N9 A A1776 -59.831 -38.769 5.927 1.00 0.01 N
ATOM 15 C8 A A1776 -58.695 -39.028 6.615 1.00 0.01 C
ATOM 16 N7 A A1776 -58.884 -39.382 7.863 1.00 0.01 N
ATOM 17 C5 A A1776 -60.239 -39.381 7.969 1.00 0.01 C
ATOM 18 C6 A A1776 -61.042 -39.682 9.038 1.00 0.01 C
ATOM 19 N6 A A1776 -60.494 -40.023 10.188 1.00 0.01 N
ATOM 20 N1 A A1776 -62.373 -39.610 8.882 1.00 0.01 N
ATOM 21 C2 A A1776 -62.829 -39.260 7.684 1.00 0.01 C
ATOM 22 N3 A A1776 -62.158 -38.960 6.590 1.00 0.01 N
ATOM 23 C4 A A1776 -60.843 -39.037 6.802 1.00 0.01 C
ATOM 24 P A A1777 -55.924 -37.304 2.295 1.00 0.01 P
ATOM 25 OP1 A A1777 -55.399 -37.323 0.957 1.00 0.01 O
ATOM 26 OP2 A A1777 -55.305 -38.167 3.306 1.00 0.01 O
ATOM 27 O5' A A1777 -56.003 -35.818 2.825 1.00 0.01 O
TER
ATOM 1 O3' U B1771 -53.537 -35.230 12.540 1.00 0.01 O
ATOM 2 P U B1772 -52.547 -36.473 12.319 1.00 0.01 P
ATOM 3 OP1 U B1772 -51.906 -36.772 13.601 1.00 0.01 O
ATOM 4 OP2 U B1772 -51.688 -36.174 11.168 1.00 0.01 O
ATOM 5 O5' U B1772 -53.561 -37.616 11.979 1.00 0.01 O
ATOM 6 C5' U B1772 -54.414 -38.115 12.987 1.00 0.01 C
ATOM 7 C4' U B1772 -55.762 -38.495 12.442 1.00 0.01 C
ATOM 8 O4' U B1772 -56.446 -37.343 11.917 1.00 0.01 O
ATOM 9 C3' U B1772 -55.775 -39.457 11.285 1.00 0.01 C
ATOM 10 O3' U B1772 -55.559 -40.776 11.696 1.00 0.01 O
ATOM 11 C2' U B1772 -57.163 -39.244 10.714 1.00 0.01 C
ATOM 12 O2' U B1772 -58.088 -40.048 11.388 1.00 0.01 O
ATOM 13 C1' U B1772 -57.450 -37.787 11.062 1.00 0.01 C
ATOM 14 N1 U B1772 -57.541 -36.940 9.858 1.00 0.01 N
ATOM 15 C2 U B1772 -58.844 -36.563 9.685 1.00 0.01 C
ATOM 16 O2 U B1772 -59.696 -36.801 10.490 1.00 0.01 O
ATOM 17 N3 U B1772 -59.216 -35.873 8.630 1.00 0.01 N
ATOM 18 C4 U B1772 -58.397 -35.509 7.685 1.00 0.01 C
ATOM 19 O4 U B1772 -58.965 -34.866 6.815 1.00 0.01 O
ATOM 20 C5 U B1772 -57.035 -35.935 7.861 1.00 0.01 C
ATOM 21 C6 U B1772 -56.634 -36.637 8.915 1.00 0.01 C
ATOM 22 P A B1773 -54.419 -41.644 11.042 1.00 0.01 P
ATOM 23 OP1 A B1773 -54.773 -41.860 9.656 1.00 0.01 O
ATOM 24 OP2 A B1773 -54.222 -42.800 11.903 1.00 0.01 O
ATOM 25 O5' A B1773 -53.175 -40.705 11.131 1.00 0.01 O
TER
ATOM 2 P A A1776 -56.148 -41.696 4.216 1.00 0.01 P
ATOM 3 OP1 A A1776 -55.244 -40.895 3.405 1.00 0.01 O
ATOM 4 OP2 A A1776 -55.871 -41.848 5.629 1.00 0.01 O
ATOM 5 O5' A A1776 -57.625 -41.211 4.016 1.00 0.01 O
ATOM 6 C5' A A1776 -58.078 -40.815 2.748 1.00 0.01 C
ATOM 7 C4' A A1776 -58.848 -39.538 2.830 1.00 0.01 C
ATOM 8 O4' A A1776 -59.883 -39.673 3.807 1.00 0.01 O
ATOM 9 C3' A A1776 -58.063 -38.333 3.274 1.00 0.01 C
ATOM 10 O3' A A1776 -57.433 -37.711 2.194 1.00 0.01 O
ATOM 11 C2' A A1776 -59.109 -37.457 3.926 1.00 0.01 C
ATOM 12 O2' A A1776 -59.810 -36.732 2.933 1.00 0.01 O
ATOM 13 C1' A A1776 -60.060 -38.477 4.511 1.00 0.01 C
ATOM 14 N9 A A1776 -59.831 -38.769 5.927 1.00 0.01 N
ATOM 15 C8 A A1776 -58.695 -39.028 6.615 1.00 0.01 C
ATOM 16 N7 A A1776 -58.884 -39.382 7.863 1.00 0.01 N
ATOM 17 C5 A A1776 -60.239 -39.381 7.969 1.00 0.01 C
ATOM 18 C6 A A1776 -61.042 -39.682 9.038 1.00 0.01 C
ATOM 19 N6 A A1776 -60.494 -40.023 10.188 1.00 0.01 N
ATOM 20 N1 A A1776 -62.373 -39.610 8.882 1.00 0.01 N
ATOM 21 C2 A A1776 -62.829 -39.260 7.684 1.00 0.01 C
ATOM 22 N3 A A1776 -62.158 -38.960 6.590 1.00 0.01 N
ATOM 23 C4 A A1776 -60.843 -39.037 6.802 1.00 0.01 C
ATOM 24 P A A1777 -55.924 -37.304 2.295 1.00 0.01 P
ATOM 25 OP1 A A1777 -55.399 -37.323 0.957 1.00 0.01 O
ATOM 26 OP2 A A1777 -55.305 -38.167 3.306 1.00 0.01 O
ATOM 27 O5' A A1777 -56.003 -35.818 2.825 1.00 0.01 O
TER
ATOM 1 O3' U B1771 -53.537 -35.230 12.540 1.00 0.01 O
ATOM 2 P U B1772 -52.547 -36.473 12.319 1.00 0.01 P
ATOM 3 OP1 U B1772 -51.906 -36.772 13.601 1.00 0.01 O
ATOM 4 OP2 U B1772 -51.688 -36.174 11.168 1.00 0.01 O
ATOM 5 O5' U B1772 -53.561 -37.616 11.979 1.00 0.01 O
ATOM 6 C5' U B1772 -54.414 -38.115 12.987 1.00 0.01 C
ATOM 7 C4' U B1772 -55.762 -38.495 12.442 1.00 0.01 C
ATOM 8 O4' U B1772 -56.446 -37.343 11.917 1.00 0.01 O
ATOM 9 C3' U B1772 -55.775 -39.457 11.285 1.00 0.01 C
ATOM 10 O3' U B1772 -55.559 -40.776 11.696 1.00 0.01 O
ATOM 11 C2' U B1772 -57.163 -39.244 10.714 1.00 0.01 C
ATOM 12 O2' U B1772 -58.088 -40.048 11.388 1.00 0.01 O
ATOM 13 C1' U B1772 -57.450 -37.787 11.062 1.00 0.01 C
ATOM 14 N1 U B1772 -57.541 -36.940 9.858 1.00 0.01 N
ATOM 15 C2 U B1772 -58.844 -36.563 9.685 1.00 0.01 C
ATOM 16 O2 U B1772 -59.696 -36.801 10.490 1.00 0.01 O
ATOM 17 N3 U B1772 -59.216 -35.873 8.630 1.00 0.01 N
ATOM 18 C4 U B1772 -58.397 -35.509 7.685 1.00 0.01 C
ATOM 19 O4 U B1772 -58.965 -34.866 6.815 1.00 0.01 O
ATOM 20 C5 U B1772 -57.035 -35.935 7.861 1.00 0.01 C
ATOM 21 C6 U B1772 -56.634 -36.637 8.915 1.00 0.01 C
ATOM 22 P A B1773 -54.419 -41.644 11.042 1.00 0.01 P
ATOM 23 OP1 A B1773 -54.773 -41.860 9.656 1.00 0.01 O
ATOM 24 OP2 A B1773 -54.222 -42.800 11.903 1.00 0.01 O
ATOM 25 O5' A B1773 -53.175 -40.705 11.131 1.00 0.01 O
TER
Atoms:
OP1: (-55.244,-40.895,3.405)
OP2: (-55.871,-41.848,5.629)
C3': (-58.063,-38.333,3.274)
C1': (-60.060,-38.477,4.511)
C5': (-58.078,-40.815,2.748)
O4': (-59.883,-39.673,3.807)
C8: (-58.695,-39.028,6.615)
O2': (-59.810,-36.732,2.933)
C6: (-61.042,-39.682,9.038)
C5: (-60.239,-39.381,7.969)
C4: (-60.843,-39.037,6.802)
P: (-56.148,-41.696,4.216)
C4': (-58.848,-39.538,2.830)
C2': (-59.109,-37.457,3.926)
C2: (-62.829,-39.260,7.684)
N1: (-62.373,-39.610,8.882)
N3: (-62.158,-38.960,6.590)
N6: (-60.494,-40.023,10.188)
N7: (-58.884,-39.382,7.863)
N9: (-59.831,-38.769,5.927)
O5': (-57.625,-41.211,4.016)
O3': (-57.433,-37.711,2.194)
OP2: (-55.871,-41.848,5.629)
C3': (-58.063,-38.333,3.274)
C1': (-60.060,-38.477,4.511)
C5': (-58.078,-40.815,2.748)
O4': (-59.883,-39.673,3.807)
C8: (-58.695,-39.028,6.615)
O2': (-59.810,-36.732,2.933)
C6: (-61.042,-39.682,9.038)
C5: (-60.239,-39.381,7.969)
C4: (-60.843,-39.037,6.802)
P: (-56.148,-41.696,4.216)
C4': (-58.848,-39.538,2.830)
C2': (-59.109,-37.457,3.926)
C2: (-62.829,-39.260,7.684)
N1: (-62.373,-39.610,8.882)
N3: (-62.158,-38.960,6.590)
N6: (-60.494,-40.023,10.188)
N7: (-58.884,-39.382,7.863)
N9: (-59.831,-38.769,5.927)
O5': (-57.625,-41.211,4.016)
O3': (-57.433,-37.711,2.194)
C4: (-58.397,-35.509,7.685)
N3: (-59.216,-35.873,8.630)
OP1: (-51.906,-36.772,13.601)
OP2: (-51.688,-36.174,11.168)
C2: (-58.844,-36.563,9.685)
C1': (-57.450,-37.787,11.062)
C3': (-55.775,-39.457,11.285)
O5': (-53.561,-37.616,11.979)
O4': (-56.446,-37.343,11.917)
C5': (-54.414,-38.115,12.987)
P: (-52.547,-36.473,12.319)
C4': (-55.762,-38.495,12.442)
C2': (-57.163,-39.244,10.714)
O2': (-58.088,-40.048,11.388)
N1: (-57.541,-36.940,9.858)
O4: (-58.965,-34.866,6.815)
O2: (-59.696,-36.801,10.490)
C6: (-56.634,-36.637,8.915)
C5: (-57.035,-35.935,7.861)
O3': (-55.559,-40.776,11.696)
N3: (-59.216,-35.873,8.630)
OP1: (-51.906,-36.772,13.601)
OP2: (-51.688,-36.174,11.168)
C2: (-58.844,-36.563,9.685)
C1': (-57.450,-37.787,11.062)
C3': (-55.775,-39.457,11.285)
O5': (-53.561,-37.616,11.979)
O4': (-56.446,-37.343,11.917)
C5': (-54.414,-38.115,12.987)
P: (-52.547,-36.473,12.319)
C4': (-55.762,-38.495,12.442)
C2': (-57.163,-39.244,10.714)
O2': (-58.088,-40.048,11.388)
N1: (-57.541,-36.940,9.858)
O4: (-58.965,-34.866,6.815)
O2: (-59.696,-36.801,10.490)
C6: (-56.634,-36.637,8.915)
C5: (-57.035,-35.935,7.861)
O3': (-55.559,-40.776,11.696)
Image (generated by PyMOL):