Doublet info:
Details
Nucleotide types:
AU
Description:
None: None
Program used:
None
Has errors:
False
Source
PDB id:
3R8S:A2351:A823
Extra
PDB:
ATOM 1 O3' G A2350 -112.226 -66.254 33.130 1.00 0.01 O
ATOM 2 P A A2351 -111.603 -67.627 32.592 1.00 0.01 P
ATOM 3 OP1 A A2351 -111.046 -67.366 31.262 1.00 0.01 O
ATOM 4 OP2 A A2351 -112.636 -68.660 32.730 1.00 0.01 O
ATOM 5 O5' A A2351 -110.447 -67.908 33.615 1.00 0.01 O
ATOM 6 C5' A A2351 -110.569 -68.971 34.521 1.00 0.01 C
ATOM 7 C4' A A2351 -109.307 -69.181 35.287 1.00 0.01 C
ATOM 8 O4' A A2351 -108.201 -68.646 34.545 1.00 0.01 O
ATOM 9 C3' A A2351 -109.210 -68.475 36.618 1.00 0.01 C
ATOM 10 O3' A A2351 -109.922 -69.137 37.636 1.00 0.01 O
ATOM 11 C2' A A2351 -107.723 -68.468 36.839 1.00 0.01 C
ATOM 12 O2' A A2351 -107.288 -69.776 37.190 1.00 0.01 O
ATOM 13 C1' A A2351 -107.239 -68.155 35.431 1.00 0.01 C
ATOM 14 N9 A A2351 -107.100 -66.719 35.167 1.00 0.01 N
ATOM 15 C8 A A2351 -107.717 -66.053 34.150 1.00 0.01 C
ATOM 16 N7 A A2351 -107.402 -64.798 34.045 1.00 0.01 N
ATOM 17 C5 A A2351 -106.501 -64.647 35.054 1.00 0.01 C
ATOM 18 C6 A A2351 -105.791 -63.539 35.482 1.00 0.01 C
ATOM 19 N6 A A2351 -105.913 -62.363 34.906 1.00 0.01 N
ATOM 20 N1 A A2351 -104.954 -63.657 36.516 1.00 0.01 N
ATOM 21 C2 A A2351 -104.870 -64.863 37.071 1.00 0.01 C
ATOM 22 N3 A A2351 -105.499 -65.995 36.768 1.00 0.01 N
ATOM 23 C4 A A2351 -106.301 -65.809 35.739 1.00 0.01 C
ATOM 24 P C A2352 -111.271 -68.501 38.185 1.00 0.01 P
ATOM 25 OP1 C A2352 -112.056 -69.598 38.786 1.00 0.01 O
ATOM 26 OP2 C A2352 -111.868 -67.730 37.089 1.00 0.01 O
ATOM 27 O5' C A2352 -110.740 -67.524 39.292 1.00 0.01 O
TER
ATOM 1 O3' C B 822 -108.847 -65.330 25.702 1.00 0.01 O
ATOM 2 P U B 823 -108.296 -63.840 25.640 1.00 0.01 P
ATOM 3 OP1 U B 823 -109.341 -63.057 24.970 1.00 0.01 O
ATOM 4 OP2 U B 823 -106.956 -63.878 25.035 1.00 0.01 O
ATOM 5 O5' U B 823 -108.157 -63.430 27.172 1.00 0.01 O
ATOM 6 C5' U B 823 -108.944 -64.028 28.169 1.00 0.01 C
ATOM 7 C4' U B 823 -108.401 -63.750 29.545 1.00 0.01 C
ATOM 8 O4' U B 823 -107.626 -64.877 29.995 1.00 0.01 O
ATOM 9 C3' U B 823 -107.431 -62.593 29.675 1.00 0.01 C
ATOM 10 O3' U B 823 -108.040 -61.335 29.731 1.00 0.01 O
ATOM 11 C2' U B 823 -106.685 -62.943 30.938 1.00 0.01 C
ATOM 12 O2' U B 823 -107.481 -62.705 32.076 1.00 0.00 O
ATOM 13 C1' U B 823 -106.533 -64.430 30.764 1.00 0.01 C
ATOM 14 N1 U B 823 -105.328 -64.737 30.047 1.00 0.01 N
ATOM 15 C2 U B 823 -104.243 -65.054 30.736 1.00 0.01 C
ATOM 16 O2 U B 823 -104.253 -65.095 31.919 1.00 0.01 O
ATOM 17 N3 U B 823 -103.154 -65.328 30.015 1.00 0.01 N
ATOM 18 C4 U B 823 -103.029 -65.304 28.676 1.00 0.01 C
ATOM 19 O4 U B 823 -101.964 -65.580 28.144 1.00 0.01 O
ATOM 20 C5 U B 823 -104.212 -64.942 28.019 1.00 0.01 C
ATOM 21 C6 U B 823 -105.303 -64.675 28.717 1.00 0.01 C
ATOM 22 P A B 824 -107.208 -60.065 29.264 1.00 0.01 P
ATOM 23 OP1 A B 824 -108.070 -58.887 29.431 1.00 0.01 O
ATOM 24 OP2 A B 824 -106.691 -60.356 27.942 1.00 0.01 O
ATOM 25 O5' A B 824 -106.019 -60.025 30.304 1.00 0.01 O
TER
ATOM 2 P A A2351 -111.603 -67.627 32.592 1.00 0.01 P
ATOM 3 OP1 A A2351 -111.046 -67.366 31.262 1.00 0.01 O
ATOM 4 OP2 A A2351 -112.636 -68.660 32.730 1.00 0.01 O
ATOM 5 O5' A A2351 -110.447 -67.908 33.615 1.00 0.01 O
ATOM 6 C5' A A2351 -110.569 -68.971 34.521 1.00 0.01 C
ATOM 7 C4' A A2351 -109.307 -69.181 35.287 1.00 0.01 C
ATOM 8 O4' A A2351 -108.201 -68.646 34.545 1.00 0.01 O
ATOM 9 C3' A A2351 -109.210 -68.475 36.618 1.00 0.01 C
ATOM 10 O3' A A2351 -109.922 -69.137 37.636 1.00 0.01 O
ATOM 11 C2' A A2351 -107.723 -68.468 36.839 1.00 0.01 C
ATOM 12 O2' A A2351 -107.288 -69.776 37.190 1.00 0.01 O
ATOM 13 C1' A A2351 -107.239 -68.155 35.431 1.00 0.01 C
ATOM 14 N9 A A2351 -107.100 -66.719 35.167 1.00 0.01 N
ATOM 15 C8 A A2351 -107.717 -66.053 34.150 1.00 0.01 C
ATOM 16 N7 A A2351 -107.402 -64.798 34.045 1.00 0.01 N
ATOM 17 C5 A A2351 -106.501 -64.647 35.054 1.00 0.01 C
ATOM 18 C6 A A2351 -105.791 -63.539 35.482 1.00 0.01 C
ATOM 19 N6 A A2351 -105.913 -62.363 34.906 1.00 0.01 N
ATOM 20 N1 A A2351 -104.954 -63.657 36.516 1.00 0.01 N
ATOM 21 C2 A A2351 -104.870 -64.863 37.071 1.00 0.01 C
ATOM 22 N3 A A2351 -105.499 -65.995 36.768 1.00 0.01 N
ATOM 23 C4 A A2351 -106.301 -65.809 35.739 1.00 0.01 C
ATOM 24 P C A2352 -111.271 -68.501 38.185 1.00 0.01 P
ATOM 25 OP1 C A2352 -112.056 -69.598 38.786 1.00 0.01 O
ATOM 26 OP2 C A2352 -111.868 -67.730 37.089 1.00 0.01 O
ATOM 27 O5' C A2352 -110.740 -67.524 39.292 1.00 0.01 O
TER
ATOM 1 O3' C B 822 -108.847 -65.330 25.702 1.00 0.01 O
ATOM 2 P U B 823 -108.296 -63.840 25.640 1.00 0.01 P
ATOM 3 OP1 U B 823 -109.341 -63.057 24.970 1.00 0.01 O
ATOM 4 OP2 U B 823 -106.956 -63.878 25.035 1.00 0.01 O
ATOM 5 O5' U B 823 -108.157 -63.430 27.172 1.00 0.01 O
ATOM 6 C5' U B 823 -108.944 -64.028 28.169 1.00 0.01 C
ATOM 7 C4' U B 823 -108.401 -63.750 29.545 1.00 0.01 C
ATOM 8 O4' U B 823 -107.626 -64.877 29.995 1.00 0.01 O
ATOM 9 C3' U B 823 -107.431 -62.593 29.675 1.00 0.01 C
ATOM 10 O3' U B 823 -108.040 -61.335 29.731 1.00 0.01 O
ATOM 11 C2' U B 823 -106.685 -62.943 30.938 1.00 0.01 C
ATOM 12 O2' U B 823 -107.481 -62.705 32.076 1.00 0.00 O
ATOM 13 C1' U B 823 -106.533 -64.430 30.764 1.00 0.01 C
ATOM 14 N1 U B 823 -105.328 -64.737 30.047 1.00 0.01 N
ATOM 15 C2 U B 823 -104.243 -65.054 30.736 1.00 0.01 C
ATOM 16 O2 U B 823 -104.253 -65.095 31.919 1.00 0.01 O
ATOM 17 N3 U B 823 -103.154 -65.328 30.015 1.00 0.01 N
ATOM 18 C4 U B 823 -103.029 -65.304 28.676 1.00 0.01 C
ATOM 19 O4 U B 823 -101.964 -65.580 28.144 1.00 0.01 O
ATOM 20 C5 U B 823 -104.212 -64.942 28.019 1.00 0.01 C
ATOM 21 C6 U B 823 -105.303 -64.675 28.717 1.00 0.01 C
ATOM 22 P A B 824 -107.208 -60.065 29.264 1.00 0.01 P
ATOM 23 OP1 A B 824 -108.070 -58.887 29.431 1.00 0.01 O
ATOM 24 OP2 A B 824 -106.691 -60.356 27.942 1.00 0.01 O
ATOM 25 O5' A B 824 -106.019 -60.025 30.304 1.00 0.01 O
TER
Atoms:
OP1: (-111.046,-67.366,31.262)
OP2: (-112.636,-68.660,32.730)
C3': (-109.210,-68.475,36.618)
C1': (-107.239,-68.155,35.431)
C5': (-110.569,-68.971,34.521)
O4': (-108.201,-68.646,34.545)
C8: (-107.717,-66.053,34.150)
O2': (-107.288,-69.776,37.190)
C6: (-105.791,-63.539,35.482)
C5: (-106.501,-64.647,35.054)
C4: (-106.301,-65.809,35.739)
P: (-111.603,-67.627,32.592)
C4': (-109.307,-69.181,35.287)
C2': (-107.723,-68.468,36.839)
C2: (-104.870,-64.863,37.071)
N1: (-104.954,-63.657,36.516)
N3: (-105.499,-65.995,36.768)
N6: (-105.913,-62.363,34.906)
N7: (-107.402,-64.798,34.045)
N9: (-107.100,-66.719,35.167)
O5': (-110.447,-67.908,33.615)
O3': (-109.922,-69.137,37.636)
OP2: (-112.636,-68.660,32.730)
C3': (-109.210,-68.475,36.618)
C1': (-107.239,-68.155,35.431)
C5': (-110.569,-68.971,34.521)
O4': (-108.201,-68.646,34.545)
C8: (-107.717,-66.053,34.150)
O2': (-107.288,-69.776,37.190)
C6: (-105.791,-63.539,35.482)
C5: (-106.501,-64.647,35.054)
C4: (-106.301,-65.809,35.739)
P: (-111.603,-67.627,32.592)
C4': (-109.307,-69.181,35.287)
C2': (-107.723,-68.468,36.839)
C2: (-104.870,-64.863,37.071)
N1: (-104.954,-63.657,36.516)
N3: (-105.499,-65.995,36.768)
N6: (-105.913,-62.363,34.906)
N7: (-107.402,-64.798,34.045)
N9: (-107.100,-66.719,35.167)
O5': (-110.447,-67.908,33.615)
O3': (-109.922,-69.137,37.636)
C4: (-103.029,-65.304,28.676)
N3: (-103.154,-65.328,30.015)
OP1: (-109.341,-63.057,24.970)
OP2: (-106.956,-63.878,25.035)
C2: (-104.243,-65.054,30.736)
C1': (-106.533,-64.430,30.764)
C3': (-107.431,-62.593,29.675)
O5': (-108.157,-63.430,27.172)
O4': (-107.626,-64.877,29.995)
C5': (-108.944,-64.028,28.169)
P: (-108.296,-63.840,25.640)
C4': (-108.401,-63.750,29.545)
C2': (-106.685,-62.943,30.938)
O2': (-107.481,-62.705,32.076)
N1: (-105.328,-64.737,30.047)
O4: (-101.964,-65.580,28.144)
O2: (-104.253,-65.095,31.919)
C6: (-105.303,-64.675,28.717)
C5: (-104.212,-64.942,28.019)
O3': (-108.040,-61.335,29.731)
N3: (-103.154,-65.328,30.015)
OP1: (-109.341,-63.057,24.970)
OP2: (-106.956,-63.878,25.035)
C2: (-104.243,-65.054,30.736)
C1': (-106.533,-64.430,30.764)
C3': (-107.431,-62.593,29.675)
O5': (-108.157,-63.430,27.172)
O4': (-107.626,-64.877,29.995)
C5': (-108.944,-64.028,28.169)
P: (-108.296,-63.840,25.640)
C4': (-108.401,-63.750,29.545)
C2': (-106.685,-62.943,30.938)
O2': (-107.481,-62.705,32.076)
N1: (-105.328,-64.737,30.047)
O4: (-101.964,-65.580,28.144)
O2: (-104.253,-65.095,31.919)
C6: (-105.303,-64.675,28.717)
C5: (-104.212,-64.942,28.019)
O3': (-108.040,-61.335,29.731)
Image (generated by PyMOL):