Doublet info:
Details
Nucleotide types:
AU
Description:
None: None
Program used:
None
Has errors:
False
Source
PDB id:
3R8S:A2426:A2424
Extra
PDB:
ATOM 1 O3' A A2425 -95.308 -40.174 41.215 1.00 0.01 O
ATOM 2 P A A2426 -94.937 -40.978 39.922 1.00 0.01 P
ATOM 3 OP1 A A2426 -96.111 -40.901 39.033 1.00 0.01 O
ATOM 4 OP2 A A2426 -94.460 -42.304 40.348 1.00 0.01 O
ATOM 5 O5' A A2426 -93.727 -40.114 39.337 1.00 0.01 O
ATOM 6 C5' A A2426 -93.917 -38.752 38.964 1.00 0.01 C
ATOM 7 C4' A A2426 -92.626 -37.946 39.013 1.00 0.01 C
ATOM 8 O4' A A2426 -92.126 -37.871 40.366 1.00 0.01 O
ATOM 9 C3' A A2426 -91.445 -38.476 38.222 1.00 0.01 C
ATOM 10 O3' A A2426 -91.521 -38.146 36.859 1.00 0.01 O
ATOM 11 C2' A A2426 -90.264 -37.828 38.930 1.00 0.01 C
ATOM 12 O2' A A2426 -90.123 -36.468 38.550 1.00 0.01 O
ATOM 13 C1' A A2426 -90.721 -37.867 40.363 1.00 0.01 C
ATOM 14 N9 A A2426 -90.279 -39.071 41.035 1.00 0.01 N
ATOM 15 C8 A A2426 -91.025 -40.184 41.191 1.00 0.01 C
ATOM 16 N7 A A2426 -90.414 -41.100 41.870 1.00 0.01 N
ATOM 17 C5 A A2426 -89.193 -40.527 42.165 1.00 0.01 C
ATOM 18 C6 A A2426 -88.077 -40.996 42.855 1.00 0.01 C
ATOM 19 N6 A A2426 -88.066 -42.219 43.399 1.00 0.01 N
ATOM 20 N1 A A2426 -86.997 -40.171 42.975 1.00 0.01 N
ATOM 21 C2 A A2426 -87.056 -38.964 42.431 1.00 0.01 C
ATOM 22 N3 A A2426 -88.057 -38.430 41.767 1.00 0.01 N
ATOM 23 C4 A A2426 -89.095 -39.267 41.662 1.00 0.01 C
ATOM 24 P A A2427 -92.254 -39.122 35.854 1.00 0.01 P
ATOM 25 OP1 A A2427 -93.676 -38.722 35.793 1.00 0.01 O
ATOM 26 OP2 A A2427 -91.928 -40.483 36.263 1.00 0.01 O
ATOM 27 O5' A A2427 -91.544 -38.792 34.500 1.00 0.01 O
TER
ATOM 1 O3' A B2423 -94.241 -49.773 40.176 1.00 0.14 O
ATOM 2 P U B2424 -94.861 -48.657 41.141 1.00 0.01 P
ATOM 3 OP1 U B2424 -94.889 -49.230 42.520 1.00 0.01 O
ATOM 4 OP2 U B2424 -96.114 -48.186 40.547 1.00 0.01 O
ATOM 5 O5' U B2424 -93.768 -47.518 41.037 1.00 0.01 O
ATOM 6 C5' U B2424 -92.553 -47.605 41.751 1.00 0.01 C
ATOM 7 C4' U B2424 -91.934 -46.250 41.896 1.00 0.01 C
ATOM 8 O4' U B2424 -91.338 -45.880 40.645 1.00 0.01 O
ATOM 9 C3' U B2424 -92.896 -45.111 42.195 1.00 0.01 C
ATOM 10 O3' U B2424 -93.219 -44.998 43.560 1.00 0.01 O
ATOM 11 C2' U B2424 -92.158 -43.920 41.668 1.00 0.01 C
ATOM 12 O2' U B2424 -91.157 -43.535 42.574 1.00 0.01 O
ATOM 13 C1' U B2424 -91.494 -44.508 40.431 1.00 0.01 C
ATOM 14 N1 U B2424 -92.309 -44.321 39.221 1.00 0.09 N
ATOM 15 C2 U B2424 -91.996 -43.191 38.543 1.00 0.09 C
ATOM 16 O2 U B2424 -91.140 -42.451 38.967 1.00 0.09 O
ATOM 17 N3 U B2424 -92.711 -42.961 37.406 1.00 0.09 N
ATOM 18 C4 U B2424 -93.706 -43.737 36.892 1.00 0.09 C
ATOM 19 O4 U B2424 -94.230 -43.361 35.853 1.00 0.09 O
ATOM 20 C5 U B2424 -93.986 -44.917 37.661 1.00 0.09 C
ATOM 21 C6 U B2424 -93.293 -45.169 38.781 1.00 0.09 C
ATOM 22 P A B2425 -94.705 -44.619 43.993 1.00 0.01 P
ATOM 23 OP1 A B2425 -94.887 -45.066 45.362 1.00 0.01 O
ATOM 24 OP2 A B2425 -95.621 -45.138 42.947 1.00 0.01 O
ATOM 25 O5' A B2425 -94.673 -43.048 43.943 1.00 0.01 O
TER
ATOM 2 P A A2426 -94.937 -40.978 39.922 1.00 0.01 P
ATOM 3 OP1 A A2426 -96.111 -40.901 39.033 1.00 0.01 O
ATOM 4 OP2 A A2426 -94.460 -42.304 40.348 1.00 0.01 O
ATOM 5 O5' A A2426 -93.727 -40.114 39.337 1.00 0.01 O
ATOM 6 C5' A A2426 -93.917 -38.752 38.964 1.00 0.01 C
ATOM 7 C4' A A2426 -92.626 -37.946 39.013 1.00 0.01 C
ATOM 8 O4' A A2426 -92.126 -37.871 40.366 1.00 0.01 O
ATOM 9 C3' A A2426 -91.445 -38.476 38.222 1.00 0.01 C
ATOM 10 O3' A A2426 -91.521 -38.146 36.859 1.00 0.01 O
ATOM 11 C2' A A2426 -90.264 -37.828 38.930 1.00 0.01 C
ATOM 12 O2' A A2426 -90.123 -36.468 38.550 1.00 0.01 O
ATOM 13 C1' A A2426 -90.721 -37.867 40.363 1.00 0.01 C
ATOM 14 N9 A A2426 -90.279 -39.071 41.035 1.00 0.01 N
ATOM 15 C8 A A2426 -91.025 -40.184 41.191 1.00 0.01 C
ATOM 16 N7 A A2426 -90.414 -41.100 41.870 1.00 0.01 N
ATOM 17 C5 A A2426 -89.193 -40.527 42.165 1.00 0.01 C
ATOM 18 C6 A A2426 -88.077 -40.996 42.855 1.00 0.01 C
ATOM 19 N6 A A2426 -88.066 -42.219 43.399 1.00 0.01 N
ATOM 20 N1 A A2426 -86.997 -40.171 42.975 1.00 0.01 N
ATOM 21 C2 A A2426 -87.056 -38.964 42.431 1.00 0.01 C
ATOM 22 N3 A A2426 -88.057 -38.430 41.767 1.00 0.01 N
ATOM 23 C4 A A2426 -89.095 -39.267 41.662 1.00 0.01 C
ATOM 24 P A A2427 -92.254 -39.122 35.854 1.00 0.01 P
ATOM 25 OP1 A A2427 -93.676 -38.722 35.793 1.00 0.01 O
ATOM 26 OP2 A A2427 -91.928 -40.483 36.263 1.00 0.01 O
ATOM 27 O5' A A2427 -91.544 -38.792 34.500 1.00 0.01 O
TER
ATOM 1 O3' A B2423 -94.241 -49.773 40.176 1.00 0.14 O
ATOM 2 P U B2424 -94.861 -48.657 41.141 1.00 0.01 P
ATOM 3 OP1 U B2424 -94.889 -49.230 42.520 1.00 0.01 O
ATOM 4 OP2 U B2424 -96.114 -48.186 40.547 1.00 0.01 O
ATOM 5 O5' U B2424 -93.768 -47.518 41.037 1.00 0.01 O
ATOM 6 C5' U B2424 -92.553 -47.605 41.751 1.00 0.01 C
ATOM 7 C4' U B2424 -91.934 -46.250 41.896 1.00 0.01 C
ATOM 8 O4' U B2424 -91.338 -45.880 40.645 1.00 0.01 O
ATOM 9 C3' U B2424 -92.896 -45.111 42.195 1.00 0.01 C
ATOM 10 O3' U B2424 -93.219 -44.998 43.560 1.00 0.01 O
ATOM 11 C2' U B2424 -92.158 -43.920 41.668 1.00 0.01 C
ATOM 12 O2' U B2424 -91.157 -43.535 42.574 1.00 0.01 O
ATOM 13 C1' U B2424 -91.494 -44.508 40.431 1.00 0.01 C
ATOM 14 N1 U B2424 -92.309 -44.321 39.221 1.00 0.09 N
ATOM 15 C2 U B2424 -91.996 -43.191 38.543 1.00 0.09 C
ATOM 16 O2 U B2424 -91.140 -42.451 38.967 1.00 0.09 O
ATOM 17 N3 U B2424 -92.711 -42.961 37.406 1.00 0.09 N
ATOM 18 C4 U B2424 -93.706 -43.737 36.892 1.00 0.09 C
ATOM 19 O4 U B2424 -94.230 -43.361 35.853 1.00 0.09 O
ATOM 20 C5 U B2424 -93.986 -44.917 37.661 1.00 0.09 C
ATOM 21 C6 U B2424 -93.293 -45.169 38.781 1.00 0.09 C
ATOM 22 P A B2425 -94.705 -44.619 43.993 1.00 0.01 P
ATOM 23 OP1 A B2425 -94.887 -45.066 45.362 1.00 0.01 O
ATOM 24 OP2 A B2425 -95.621 -45.138 42.947 1.00 0.01 O
ATOM 25 O5' A B2425 -94.673 -43.048 43.943 1.00 0.01 O
TER
Atoms:
OP1: (-96.111,-40.901,39.033)
OP2: (-94.460,-42.304,40.348)
C3': (-91.445,-38.476,38.222)
C1': (-90.721,-37.867,40.363)
C5': (-93.917,-38.752,38.964)
O4': (-92.126,-37.871,40.366)
C8: (-91.025,-40.184,41.191)
O2': (-90.123,-36.468,38.550)
C6: (-88.077,-40.996,42.855)
C5: (-89.193,-40.527,42.165)
C4: (-89.095,-39.267,41.662)
P: (-94.937,-40.978,39.922)
C4': (-92.626,-37.946,39.013)
C2': (-90.264,-37.828,38.930)
C2: (-87.056,-38.964,42.431)
N1: (-86.997,-40.171,42.975)
N3: (-88.057,-38.430,41.767)
N6: (-88.066,-42.219,43.399)
N7: (-90.414,-41.100,41.870)
N9: (-90.279,-39.071,41.035)
O5': (-93.727,-40.114,39.337)
O3': (-91.521,-38.146,36.859)
OP2: (-94.460,-42.304,40.348)
C3': (-91.445,-38.476,38.222)
C1': (-90.721,-37.867,40.363)
C5': (-93.917,-38.752,38.964)
O4': (-92.126,-37.871,40.366)
C8: (-91.025,-40.184,41.191)
O2': (-90.123,-36.468,38.550)
C6: (-88.077,-40.996,42.855)
C5: (-89.193,-40.527,42.165)
C4: (-89.095,-39.267,41.662)
P: (-94.937,-40.978,39.922)
C4': (-92.626,-37.946,39.013)
C2': (-90.264,-37.828,38.930)
C2: (-87.056,-38.964,42.431)
N1: (-86.997,-40.171,42.975)
N3: (-88.057,-38.430,41.767)
N6: (-88.066,-42.219,43.399)
N7: (-90.414,-41.100,41.870)
N9: (-90.279,-39.071,41.035)
O5': (-93.727,-40.114,39.337)
O3': (-91.521,-38.146,36.859)
C4: (-93.706,-43.737,36.892)
N3: (-92.711,-42.961,37.406)
OP1: (-94.889,-49.230,42.520)
OP2: (-96.114,-48.186,40.547)
C2: (-91.996,-43.191,38.543)
C1': (-91.494,-44.508,40.431)
C3': (-92.896,-45.111,42.195)
O5': (-93.768,-47.518,41.037)
O4': (-91.338,-45.880,40.645)
C5': (-92.553,-47.605,41.751)
P: (-94.861,-48.657,41.141)
C4': (-91.934,-46.250,41.896)
C2': (-92.158,-43.920,41.668)
O2': (-91.157,-43.535,42.574)
N1: (-92.309,-44.321,39.221)
O4: (-94.230,-43.361,35.853)
O2: (-91.140,-42.451,38.967)
C6: (-93.293,-45.169,38.781)
C5: (-93.986,-44.917,37.661)
O3': (-93.219,-44.998,43.560)
N3: (-92.711,-42.961,37.406)
OP1: (-94.889,-49.230,42.520)
OP2: (-96.114,-48.186,40.547)
C2: (-91.996,-43.191,38.543)
C1': (-91.494,-44.508,40.431)
C3': (-92.896,-45.111,42.195)
O5': (-93.768,-47.518,41.037)
O4': (-91.338,-45.880,40.645)
C5': (-92.553,-47.605,41.751)
P: (-94.861,-48.657,41.141)
C4': (-91.934,-46.250,41.896)
C2': (-92.158,-43.920,41.668)
O2': (-91.157,-43.535,42.574)
N1: (-92.309,-44.321,39.221)
O4: (-94.230,-43.361,35.853)
O2: (-91.140,-42.451,38.967)
C6: (-93.293,-45.169,38.781)
C5: (-93.986,-44.917,37.661)
O3': (-93.219,-44.998,43.560)
Image (generated by PyMOL):