Doublet info:
Details
Nucleotide types:
AU
Description:
None: None
Program used:
None
Has errors:
False
Source
PDB id:
3R8T:A1920:A1918
Extra
PDB:
ATOM 1 O3' A A1919 -46.689 134.991 107.123 1.00 11.68 O
ATOM 2 P A A1920 -47.798 133.927 106.706 1.00 9.61 P
ATOM 3 OP1 A A1920 -48.017 134.087 105.251 1.00 9.61 O
ATOM 4 OP2 A A1920 -48.955 134.116 107.631 1.00 9.61 O
ATOM 5 O5' A A1920 -47.067 132.532 106.996 1.00 9.61 O
ATOM 6 C5' A A1920 -45.886 132.178 106.287 1.00 9.61 C
ATOM 7 C4' A A1920 -44.957 131.314 107.111 1.00 9.61 C
ATOM 8 O4' A A1920 -44.628 131.969 108.360 1.00 9.61 O
ATOM 9 C3' A A1920 -45.496 129.958 107.537 1.00 9.61 C
ATOM 10 O3' A A1920 -45.400 128.984 106.516 1.00 9.61 O
ATOM 11 C2' A A1920 -44.647 129.628 108.753 1.00 9.61 C
ATOM 12 O2' A A1920 -43.390 129.099 108.366 1.00 9.61 O
ATOM 13 C1' A A1920 -44.432 131.002 109.371 1.00 9.61 C
ATOM 14 N9 A A1920 -45.385 131.253 110.453 1.00 9.14 N
ATOM 15 C8 A A1920 -46.650 131.728 110.322 1.00 9.14 C
ATOM 16 N7 A A1920 -47.268 131.842 111.462 1.00 9.14 N
ATOM 17 C5 A A1920 -46.352 131.408 112.392 1.00 9.14 C
ATOM 18 C6 A A1920 -46.429 131.280 113.781 1.00 9.14 C
ATOM 19 N6 A A1920 -47.561 131.613 114.415 1.00 9.14 N
ATOM 20 N1 A A1920 -45.326 130.795 114.456 1.00 9.14 N
ATOM 21 C2 A A1920 -44.229 130.446 113.761 1.00 9.14 C
ATOM 22 N3 A A1920 -44.055 130.522 112.430 1.00 9.14 N
ATOM 23 C4 A A1920 -45.167 131.024 111.795 1.00 9.14 C
ATOM 24 P G A1921 -46.705 128.158 106.070 1.00 23.81 P
ATOM 25 OP1 G A1921 -46.216 126.936 105.362 1.00 23.81 O
ATOM 26 OP2 G A1921 -47.597 129.115 105.346 1.00 23.81 O
ATOM 27 O5' G A1921 -47.372 127.754 107.466 1.00 23.81 O
TER
ATOM 1 O3' C B1917 -56.332 134.504 110.351 1.00 14.22 O
ATOM 2 P U B1918 -55.180 135.426 109.735 1.00 30.05 P
ATOM 3 OP1 U B1918 -55.658 136.829 109.765 1.00 30.05 O
ATOM 4 OP2 U B1918 -54.790 134.829 108.425 1.00 30.05 O
ATOM 5 O5' U B1918 -54.021 135.238 110.785 1.00 30.05 O
ATOM 6 C5' U B1918 -52.703 135.533 110.425 1.00 30.05 C
ATOM 7 C4' U B1918 -51.762 134.501 110.947 1.00 30.05 C
ATOM 8 O4' U B1918 -52.233 133.171 110.619 1.00 30.05 O
ATOM 9 C3' U B1918 -50.377 134.532 110.362 1.00 30.05 C
ATOM 10 O3' U B1918 -49.606 135.599 110.865 1.00 30.05 O
ATOM 11 C2' U B1918 -49.874 133.154 110.712 1.00 30.05 C
ATOM 12 O2' U B1918 -49.625 133.058 112.107 1.00 30.05 O
ATOM 13 C1' U B1918 -51.119 132.331 110.387 1.00 30.05 C
ATOM 14 N1 U B1918 -51.157 131.906 108.976 1.00 30.24 N
ATOM 15 C2 U B1918 -50.074 131.318 108.350 1.00 30.24 C
ATOM 16 O2 U B1918 -48.999 131.089 108.848 1.00 30.24 O
ATOM 17 N3 U B1918 -50.284 130.995 107.051 1.00 30.24 N
ATOM 18 C4 U B1918 -51.438 131.188 106.331 1.00 30.24 C
ATOM 19 O4 U B1918 -51.468 130.834 105.152 1.00 30.24 O
ATOM 20 C5 U B1918 -52.516 131.791 107.033 1.00 30.24 C
ATOM 21 C6 U B1918 -52.331 132.118 108.303 1.00 30.24 C
ATOM 22 P A B1919 -49.933 137.083 110.347 1.00 11.68 P
ATOM 23 OP1 A B1919 -50.521 137.843 111.490 1.00 11.68 O
ATOM 24 OP2 A B1919 -50.739 136.918 109.106 1.00 11.68 O
ATOM 25 O5' A B1919 -48.485 137.648 109.980 1.00 11.68 O
TER
ATOM 2 P A A1920 -47.798 133.927 106.706 1.00 9.61 P
ATOM 3 OP1 A A1920 -48.017 134.087 105.251 1.00 9.61 O
ATOM 4 OP2 A A1920 -48.955 134.116 107.631 1.00 9.61 O
ATOM 5 O5' A A1920 -47.067 132.532 106.996 1.00 9.61 O
ATOM 6 C5' A A1920 -45.886 132.178 106.287 1.00 9.61 C
ATOM 7 C4' A A1920 -44.957 131.314 107.111 1.00 9.61 C
ATOM 8 O4' A A1920 -44.628 131.969 108.360 1.00 9.61 O
ATOM 9 C3' A A1920 -45.496 129.958 107.537 1.00 9.61 C
ATOM 10 O3' A A1920 -45.400 128.984 106.516 1.00 9.61 O
ATOM 11 C2' A A1920 -44.647 129.628 108.753 1.00 9.61 C
ATOM 12 O2' A A1920 -43.390 129.099 108.366 1.00 9.61 O
ATOM 13 C1' A A1920 -44.432 131.002 109.371 1.00 9.61 C
ATOM 14 N9 A A1920 -45.385 131.253 110.453 1.00 9.14 N
ATOM 15 C8 A A1920 -46.650 131.728 110.322 1.00 9.14 C
ATOM 16 N7 A A1920 -47.268 131.842 111.462 1.00 9.14 N
ATOM 17 C5 A A1920 -46.352 131.408 112.392 1.00 9.14 C
ATOM 18 C6 A A1920 -46.429 131.280 113.781 1.00 9.14 C
ATOM 19 N6 A A1920 -47.561 131.613 114.415 1.00 9.14 N
ATOM 20 N1 A A1920 -45.326 130.795 114.456 1.00 9.14 N
ATOM 21 C2 A A1920 -44.229 130.446 113.761 1.00 9.14 C
ATOM 22 N3 A A1920 -44.055 130.522 112.430 1.00 9.14 N
ATOM 23 C4 A A1920 -45.167 131.024 111.795 1.00 9.14 C
ATOM 24 P G A1921 -46.705 128.158 106.070 1.00 23.81 P
ATOM 25 OP1 G A1921 -46.216 126.936 105.362 1.00 23.81 O
ATOM 26 OP2 G A1921 -47.597 129.115 105.346 1.00 23.81 O
ATOM 27 O5' G A1921 -47.372 127.754 107.466 1.00 23.81 O
TER
ATOM 1 O3' C B1917 -56.332 134.504 110.351 1.00 14.22 O
ATOM 2 P U B1918 -55.180 135.426 109.735 1.00 30.05 P
ATOM 3 OP1 U B1918 -55.658 136.829 109.765 1.00 30.05 O
ATOM 4 OP2 U B1918 -54.790 134.829 108.425 1.00 30.05 O
ATOM 5 O5' U B1918 -54.021 135.238 110.785 1.00 30.05 O
ATOM 6 C5' U B1918 -52.703 135.533 110.425 1.00 30.05 C
ATOM 7 C4' U B1918 -51.762 134.501 110.947 1.00 30.05 C
ATOM 8 O4' U B1918 -52.233 133.171 110.619 1.00 30.05 O
ATOM 9 C3' U B1918 -50.377 134.532 110.362 1.00 30.05 C
ATOM 10 O3' U B1918 -49.606 135.599 110.865 1.00 30.05 O
ATOM 11 C2' U B1918 -49.874 133.154 110.712 1.00 30.05 C
ATOM 12 O2' U B1918 -49.625 133.058 112.107 1.00 30.05 O
ATOM 13 C1' U B1918 -51.119 132.331 110.387 1.00 30.05 C
ATOM 14 N1 U B1918 -51.157 131.906 108.976 1.00 30.24 N
ATOM 15 C2 U B1918 -50.074 131.318 108.350 1.00 30.24 C
ATOM 16 O2 U B1918 -48.999 131.089 108.848 1.00 30.24 O
ATOM 17 N3 U B1918 -50.284 130.995 107.051 1.00 30.24 N
ATOM 18 C4 U B1918 -51.438 131.188 106.331 1.00 30.24 C
ATOM 19 O4 U B1918 -51.468 130.834 105.152 1.00 30.24 O
ATOM 20 C5 U B1918 -52.516 131.791 107.033 1.00 30.24 C
ATOM 21 C6 U B1918 -52.331 132.118 108.303 1.00 30.24 C
ATOM 22 P A B1919 -49.933 137.083 110.347 1.00 11.68 P
ATOM 23 OP1 A B1919 -50.521 137.843 111.490 1.00 11.68 O
ATOM 24 OP2 A B1919 -50.739 136.918 109.106 1.00 11.68 O
ATOM 25 O5' A B1919 -48.485 137.648 109.980 1.00 11.68 O
TER
Atoms:
OP1: (-48.017,134.087,105.251)
OP2: (-48.955,134.116,107.631)
C3': (-45.496,129.958,107.537)
C1': (-44.432,131.002,109.371)
C5': (-45.886,132.178,106.287)
O4': (-44.628,131.969,108.360)
C8: (-46.650,131.728,110.322)
O2': (-43.390,129.099,108.366)
C6: (-46.429,131.280,113.781)
C5: (-46.352,131.408,112.392)
C4: (-45.167,131.024,111.795)
P: (-47.798,133.927,106.706)
C4': (-44.957,131.314,107.111)
C2': (-44.647,129.628,108.753)
C2: (-44.229,130.446,113.761)
N1: (-45.326,130.795,114.456)
N3: (-44.055,130.522,112.430)
N6: (-47.561,131.613,114.415)
N7: (-47.268,131.842,111.462)
N9: (-45.385,131.253,110.453)
O5': (-47.067,132.532,106.996)
O3': (-45.400,128.984,106.516)
OP2: (-48.955,134.116,107.631)
C3': (-45.496,129.958,107.537)
C1': (-44.432,131.002,109.371)
C5': (-45.886,132.178,106.287)
O4': (-44.628,131.969,108.360)
C8: (-46.650,131.728,110.322)
O2': (-43.390,129.099,108.366)
C6: (-46.429,131.280,113.781)
C5: (-46.352,131.408,112.392)
C4: (-45.167,131.024,111.795)
P: (-47.798,133.927,106.706)
C4': (-44.957,131.314,107.111)
C2': (-44.647,129.628,108.753)
C2: (-44.229,130.446,113.761)
N1: (-45.326,130.795,114.456)
N3: (-44.055,130.522,112.430)
N6: (-47.561,131.613,114.415)
N7: (-47.268,131.842,111.462)
N9: (-45.385,131.253,110.453)
O5': (-47.067,132.532,106.996)
O3': (-45.400,128.984,106.516)
C4: (-51.438,131.188,106.331)
N3: (-50.284,130.995,107.051)
OP1: (-55.658,136.829,109.765)
OP2: (-54.790,134.829,108.425)
C2: (-50.074,131.318,108.350)
C1': (-51.119,132.331,110.387)
C3': (-50.377,134.532,110.362)
O5': (-54.021,135.238,110.785)
O4': (-52.233,133.171,110.619)
C5': (-52.703,135.533,110.425)
P: (-55.180,135.426,109.735)
C4': (-51.762,134.501,110.947)
C2': (-49.874,133.154,110.712)
O2': (-49.625,133.058,112.107)
N1: (-51.157,131.906,108.976)
O4: (-51.468,130.834,105.152)
O2: (-48.999,131.089,108.848)
C6: (-52.331,132.118,108.303)
C5: (-52.516,131.791,107.033)
O3': (-49.606,135.599,110.865)
N3: (-50.284,130.995,107.051)
OP1: (-55.658,136.829,109.765)
OP2: (-54.790,134.829,108.425)
C2: (-50.074,131.318,108.350)
C1': (-51.119,132.331,110.387)
C3': (-50.377,134.532,110.362)
O5': (-54.021,135.238,110.785)
O4': (-52.233,133.171,110.619)
C5': (-52.703,135.533,110.425)
P: (-55.180,135.426,109.735)
C4': (-51.762,134.501,110.947)
C2': (-49.874,133.154,110.712)
O2': (-49.625,133.058,112.107)
N1: (-51.157,131.906,108.976)
O4: (-51.468,130.834,105.152)
O2: (-48.999,131.089,108.848)
C6: (-52.331,132.118,108.303)
C5: (-52.516,131.791,107.033)
O3': (-49.606,135.599,110.865)
Image (generated by PyMOL):