Doublet info:
Details
Nucleotide types:
AU
Description:
None: None
Program used:
None
Has errors:
False
Source
PDB id:
3R8T:A2425:A2423
Extra
PDB:
ATOM 1 O3' A A2424 -53.177 163.434 138.459 1.00 8.84 O
ATOM 2 P A A2425 -53.116 162.101 139.303 1.00 6.40 P
ATOM 3 OP1 A A2425 -54.198 161.224 138.809 1.00 6.40 O
ATOM 4 OP2 A A2425 -53.106 162.500 140.751 1.00 6.40 O
ATOM 5 O5' A A2425 -51.700 161.513 138.883 1.00 6.40 O
ATOM 6 C5' A A2425 -51.512 160.977 137.592 1.00 6.40 C
ATOM 7 C4' A A2425 -50.059 160.896 137.224 1.00 6.40 C
ATOM 8 O4' A A2425 -49.464 162.206 137.287 1.00 6.40 O
ATOM 9 C3' A A2425 -49.166 160.063 138.120 1.00 6.40 C
ATOM 10 O3' A A2425 -49.300 158.671 137.904 1.00 6.40 O
ATOM 11 C2' A A2425 -47.793 160.602 137.748 1.00 6.40 C
ATOM 12 O2' A A2425 -47.364 160.096 136.491 1.00 6.40 O
ATOM 13 C1' A A2425 -48.099 162.086 137.595 1.00 6.40 C
ATOM 14 N9 A A2425 -47.862 162.799 138.837 1.00 6.47 N
ATOM 15 C8 A A2425 -48.819 163.210 139.705 1.00 6.47 C
ATOM 16 N7 A A2425 -48.316 163.805 140.744 1.00 6.47 N
ATOM 17 C5 A A2425 -46.948 163.758 140.543 1.00 6.47 C
ATOM 18 C6 A A2425 -45.887 164.231 141.323 1.00 6.47 C
ATOM 19 N6 A A2425 -46.058 164.872 142.496 1.00 6.47 N
ATOM 20 N1 A A2425 -44.647 164.023 140.824 1.00 6.47 N
ATOM 21 C2 A A2425 -44.517 163.382 139.640 1.00 6.47 C
ATOM 22 N3 A A2425 -45.441 162.892 138.819 1.00 6.47 N
ATOM 23 C4 A A2425 -46.646 163.130 139.355 1.00 6.47 C
ATOM 24 P A A2426 -50.557 157.863 138.495 1.00 0.01 P
ATOM 25 OP1 A A2426 -51.638 157.919 137.488 1.00 0.01 O
ATOM 26 OP2 A A2426 -50.826 158.399 139.855 1.00 0.01 O
ATOM 27 O5' A A2426 -49.980 156.381 138.574 1.00 0.01 O
TER
ATOM 1 O3' A B2422 -54.298 163.373 147.891 1.00 18.64 O
ATOM 2 P U B2423 -54.766 164.218 146.610 1.00 9.41 P
ATOM 3 OP1 U B2423 -55.102 165.585 147.095 1.00 9.41 O
ATOM 4 OP2 U B2423 -55.796 163.435 145.908 1.00 9.41 O
ATOM 5 O5' U B2423 -53.445 164.259 145.739 1.00 9.41 O
ATOM 6 C5' U B2423 -52.199 164.582 146.329 1.00 9.41 C
ATOM 7 C4' U B2423 -51.133 164.626 145.287 1.00 9.41 C
ATOM 8 O4' U B2423 -50.466 163.350 145.231 1.00 9.41 O
ATOM 9 C3' U B2423 -51.626 164.830 143.863 1.00 9.41 C
ATOM 10 O3' U B2423 -51.885 166.159 143.539 1.00 9.41 O
ATOM 11 C2' U B2423 -50.523 164.244 143.054 1.00 9.41 C
ATOM 12 O2' U B2423 -49.394 165.111 143.082 1.00 9.41 O
ATOM 13 C1' U B2423 -50.228 163.007 143.882 1.00 9.41 C
ATOM 14 N1 U B2423 -51.134 161.899 143.531 1.00 9.50 N
ATOM 15 C2 U B2423 -50.725 161.042 142.560 1.00 9.50 C
ATOM 16 O2 U B2423 -49.677 161.194 141.996 1.00 9.50 O
ATOM 17 N3 U B2423 -51.574 160.027 142.285 1.00 9.50 N
ATOM 18 C4 U B2423 -52.789 159.798 142.888 1.00 9.50 C
ATOM 19 O4 U B2423 -53.459 158.826 142.515 1.00 9.50 O
ATOM 20 C5 U B2423 -53.170 160.739 143.902 1.00 9.50 C
ATOM 21 C6 U B2423 -52.338 161.744 144.175 1.00 9.50 C
ATOM 22 P A B2424 -53.229 166.485 142.768 1.00 8.84 P
ATOM 23 OP1 A B2424 -53.614 167.872 143.138 1.00 8.84 O
ATOM 24 OP2 A B2424 -54.180 165.383 143.070 1.00 8.84 O
ATOM 25 O5' A B2424 -52.789 166.394 141.240 1.00 8.84 O
TER
ATOM 2 P A A2425 -53.116 162.101 139.303 1.00 6.40 P
ATOM 3 OP1 A A2425 -54.198 161.224 138.809 1.00 6.40 O
ATOM 4 OP2 A A2425 -53.106 162.500 140.751 1.00 6.40 O
ATOM 5 O5' A A2425 -51.700 161.513 138.883 1.00 6.40 O
ATOM 6 C5' A A2425 -51.512 160.977 137.592 1.00 6.40 C
ATOM 7 C4' A A2425 -50.059 160.896 137.224 1.00 6.40 C
ATOM 8 O4' A A2425 -49.464 162.206 137.287 1.00 6.40 O
ATOM 9 C3' A A2425 -49.166 160.063 138.120 1.00 6.40 C
ATOM 10 O3' A A2425 -49.300 158.671 137.904 1.00 6.40 O
ATOM 11 C2' A A2425 -47.793 160.602 137.748 1.00 6.40 C
ATOM 12 O2' A A2425 -47.364 160.096 136.491 1.00 6.40 O
ATOM 13 C1' A A2425 -48.099 162.086 137.595 1.00 6.40 C
ATOM 14 N9 A A2425 -47.862 162.799 138.837 1.00 6.47 N
ATOM 15 C8 A A2425 -48.819 163.210 139.705 1.00 6.47 C
ATOM 16 N7 A A2425 -48.316 163.805 140.744 1.00 6.47 N
ATOM 17 C5 A A2425 -46.948 163.758 140.543 1.00 6.47 C
ATOM 18 C6 A A2425 -45.887 164.231 141.323 1.00 6.47 C
ATOM 19 N6 A A2425 -46.058 164.872 142.496 1.00 6.47 N
ATOM 20 N1 A A2425 -44.647 164.023 140.824 1.00 6.47 N
ATOM 21 C2 A A2425 -44.517 163.382 139.640 1.00 6.47 C
ATOM 22 N3 A A2425 -45.441 162.892 138.819 1.00 6.47 N
ATOM 23 C4 A A2425 -46.646 163.130 139.355 1.00 6.47 C
ATOM 24 P A A2426 -50.557 157.863 138.495 1.00 0.01 P
ATOM 25 OP1 A A2426 -51.638 157.919 137.488 1.00 0.01 O
ATOM 26 OP2 A A2426 -50.826 158.399 139.855 1.00 0.01 O
ATOM 27 O5' A A2426 -49.980 156.381 138.574 1.00 0.01 O
TER
ATOM 1 O3' A B2422 -54.298 163.373 147.891 1.00 18.64 O
ATOM 2 P U B2423 -54.766 164.218 146.610 1.00 9.41 P
ATOM 3 OP1 U B2423 -55.102 165.585 147.095 1.00 9.41 O
ATOM 4 OP2 U B2423 -55.796 163.435 145.908 1.00 9.41 O
ATOM 5 O5' U B2423 -53.445 164.259 145.739 1.00 9.41 O
ATOM 6 C5' U B2423 -52.199 164.582 146.329 1.00 9.41 C
ATOM 7 C4' U B2423 -51.133 164.626 145.287 1.00 9.41 C
ATOM 8 O4' U B2423 -50.466 163.350 145.231 1.00 9.41 O
ATOM 9 C3' U B2423 -51.626 164.830 143.863 1.00 9.41 C
ATOM 10 O3' U B2423 -51.885 166.159 143.539 1.00 9.41 O
ATOM 11 C2' U B2423 -50.523 164.244 143.054 1.00 9.41 C
ATOM 12 O2' U B2423 -49.394 165.111 143.082 1.00 9.41 O
ATOM 13 C1' U B2423 -50.228 163.007 143.882 1.00 9.41 C
ATOM 14 N1 U B2423 -51.134 161.899 143.531 1.00 9.50 N
ATOM 15 C2 U B2423 -50.725 161.042 142.560 1.00 9.50 C
ATOM 16 O2 U B2423 -49.677 161.194 141.996 1.00 9.50 O
ATOM 17 N3 U B2423 -51.574 160.027 142.285 1.00 9.50 N
ATOM 18 C4 U B2423 -52.789 159.798 142.888 1.00 9.50 C
ATOM 19 O4 U B2423 -53.459 158.826 142.515 1.00 9.50 O
ATOM 20 C5 U B2423 -53.170 160.739 143.902 1.00 9.50 C
ATOM 21 C6 U B2423 -52.338 161.744 144.175 1.00 9.50 C
ATOM 22 P A B2424 -53.229 166.485 142.768 1.00 8.84 P
ATOM 23 OP1 A B2424 -53.614 167.872 143.138 1.00 8.84 O
ATOM 24 OP2 A B2424 -54.180 165.383 143.070 1.00 8.84 O
ATOM 25 O5' A B2424 -52.789 166.394 141.240 1.00 8.84 O
TER
Atoms:
OP1: (-54.198,161.224,138.809)
OP2: (-53.106,162.500,140.751)
C3': (-49.166,160.063,138.120)
C1': (-48.099,162.086,137.595)
C5': (-51.512,160.977,137.592)
O4': (-49.464,162.206,137.287)
C8: (-48.819,163.210,139.705)
O2': (-47.364,160.096,136.491)
C6: (-45.887,164.231,141.323)
C5: (-46.948,163.758,140.543)
C4: (-46.646,163.130,139.355)
P: (-53.116,162.101,139.303)
C4': (-50.059,160.896,137.224)
C2': (-47.793,160.602,137.748)
C2: (-44.517,163.382,139.640)
N1: (-44.647,164.023,140.824)
N3: (-45.441,162.892,138.819)
N6: (-46.058,164.872,142.496)
N7: (-48.316,163.805,140.744)
N9: (-47.862,162.799,138.837)
O5': (-51.700,161.513,138.883)
O3': (-49.300,158.671,137.904)
OP2: (-53.106,162.500,140.751)
C3': (-49.166,160.063,138.120)
C1': (-48.099,162.086,137.595)
C5': (-51.512,160.977,137.592)
O4': (-49.464,162.206,137.287)
C8: (-48.819,163.210,139.705)
O2': (-47.364,160.096,136.491)
C6: (-45.887,164.231,141.323)
C5: (-46.948,163.758,140.543)
C4: (-46.646,163.130,139.355)
P: (-53.116,162.101,139.303)
C4': (-50.059,160.896,137.224)
C2': (-47.793,160.602,137.748)
C2: (-44.517,163.382,139.640)
N1: (-44.647,164.023,140.824)
N3: (-45.441,162.892,138.819)
N6: (-46.058,164.872,142.496)
N7: (-48.316,163.805,140.744)
N9: (-47.862,162.799,138.837)
O5': (-51.700,161.513,138.883)
O3': (-49.300,158.671,137.904)
C4: (-52.789,159.798,142.888)
N3: (-51.574,160.027,142.285)
OP1: (-55.102,165.585,147.095)
OP2: (-55.796,163.435,145.908)
C2: (-50.725,161.042,142.560)
C1': (-50.228,163.007,143.882)
C3': (-51.626,164.830,143.863)
O5': (-53.445,164.259,145.739)
O4': (-50.466,163.350,145.231)
C5': (-52.199,164.582,146.329)
P: (-54.766,164.218,146.610)
C4': (-51.133,164.626,145.287)
C2': (-50.523,164.244,143.054)
O2': (-49.394,165.111,143.082)
N1: (-51.134,161.899,143.531)
O4: (-53.459,158.826,142.515)
O2: (-49.677,161.194,141.996)
C6: (-52.338,161.744,144.175)
C5: (-53.170,160.739,143.902)
O3': (-51.885,166.159,143.539)
N3: (-51.574,160.027,142.285)
OP1: (-55.102,165.585,147.095)
OP2: (-55.796,163.435,145.908)
C2: (-50.725,161.042,142.560)
C1': (-50.228,163.007,143.882)
C3': (-51.626,164.830,143.863)
O5': (-53.445,164.259,145.739)
O4': (-50.466,163.350,145.231)
C5': (-52.199,164.582,146.329)
P: (-54.766,164.218,146.610)
C4': (-51.133,164.626,145.287)
C2': (-50.523,164.244,143.054)
O2': (-49.394,165.111,143.082)
N1: (-51.134,161.899,143.531)
O4: (-53.459,158.826,142.515)
O2: (-49.677,161.194,141.996)
C6: (-52.338,161.744,144.175)
C5: (-53.170,160.739,143.902)
O3': (-51.885,166.159,143.539)
Image (generated by PyMOL):