ClaRNA

Doublet info:

Details

Nucleotide types: AU
Description: None: None
Program used: None
Has errors: False

Source

PDB id: 3SKL:B48:B18

Extra

PDB:
ATOM 1 O3' U A 47 45.877 25.770 53.073 1.00 35.69 O
ATOM 2 P A A 48 45.060 26.803 52.164 1.00 32.84 P
ATOM 3 OP1 A A 48 45.373 26.521 50.743 1.00 34.14 O
ATOM 4 OP2 A A 48 45.308 28.151 52.715 1.00 33.94 O
ATOM 5 O5' A A 48 43.532 26.461 52.427 1.00 32.06 O
ATOM 6 C5' A A 48 43.027 25.175 52.149 1.00 33.06 C
ATOM 7 C4' A A 48 41.521 25.232 51.972 1.00 33.25 C
ATOM 8 O4' A A 48 40.913 25.768 53.165 1.00 32.90 O
ATOM 9 C3' A A 48 41.035 26.089 50.815 1.00 33.69 C
ATOM 10 O3' A A 48 40.057 25.360 50.124 1.00 37.39 O
ATOM 11 C2' A A 48 40.407 27.319 51.451 1.00 32.13 C
ATOM 12 O2' A A 48 39.201 27.666 50.803 1.00 32.77 O
ATOM 13 C1' A A 48 40.066 26.852 52.853 1.00 31.05 C
ATOM 14 N9 A A 48 40.277 27.865 53.873 1.00 30.05 N
ATOM 15 C8 A A 48 41.479 28.320 54.322 1.00 30.20 C
ATOM 16 N7 A A 48 41.383 29.225 55.256 1.00 30.55 N
ATOM 17 C5 A A 48 40.022 29.377 55.431 1.00 29.78 C
ATOM 18 C6 A A 48 39.271 30.196 56.284 1.00 29.51 C
ATOM 19 N6 A A 48 39.825 31.044 57.150 1.00 30.11 N
ATOM 20 N1 A A 48 37.931 30.112 56.219 1.00 29.96 N
ATOM 21 C2 A A 48 37.381 29.253 55.353 1.00 30.40 C
ATOM 22 N3 A A 48 37.989 28.428 54.498 1.00 30.51 N
ATOM 23 C4 A A 48 39.324 28.542 54.588 1.00 29.90 C
ATOM 24 P U A 49 40.058 25.293 48.529 1.00 39.36 P
ATOM 25 OP1 U A 49 40.902 24.146 48.129 1.00 39.78 O
ATOM 26 OP2 U A 49 40.333 26.633 47.963 1.00 40.67 O
ATOM 27 O5' U A 49 38.525 24.983 48.271 1.00 41.45 O
TER

ATOM 1 O3' A B 17 41.205 36.701 56.790 1.00 39.40 O
ATOM 2 P U B 18 42.572 36.396 57.572 1.00 39.70 P
ATOM 3 OP1 U B 18 42.407 36.922 58.950 1.00 39.40 O
ATOM 4 OP2 U B 18 43.708 36.853 56.736 1.00 38.97 O
ATOM 5 O5' U B 18 42.607 34.795 57.654 1.00 39.57 O
ATOM 6 C5' U B 18 41.887 34.135 58.707 1.00 39.17 C
ATOM 7 C4' U B 18 42.471 32.775 59.064 1.00 37.99 C
ATOM 8 O4' U B 18 42.379 31.891 57.922 1.00 38.33 O
ATOM 9 C3' U B 18 43.926 32.756 59.505 1.00 37.60 C
ATOM 10 O3' U B 18 44.104 31.795 60.559 1.00 37.53 O
ATOM 11 C2' U B 18 44.661 32.370 58.224 1.00 38.13 C
ATOM 12 O2' U B 18 45.874 31.688 58.468 1.00 39.74 O
ATOM 13 C1' U B 18 43.660 31.444 57.539 1.00 38.44 C
ATOM 14 N1 U B 18 43.734 31.459 56.046 1.00 38.06 N
ATOM 15 C2 U B 18 44.145 30.328 55.353 1.00 38.26 C
ATOM 16 O2 U B 18 44.470 29.281 55.881 1.00 39.03 O
ATOM 17 N3 U B 18 44.172 30.455 53.987 1.00 37.99 N
ATOM 18 C4 U B 18 43.843 31.576 53.259 1.00 38.38 C
ATOM 19 O4 U B 18 43.923 31.544 52.042 1.00 38.87 O
ATOM 20 C5 U B 18 43.416 32.711 54.039 1.00 38.92 C
ATOM 21 C6 U B 18 43.376 32.612 55.375 1.00 38.21 C
ATOM 22 P A B 19 43.629 32.112 62.069 1.00 38.03 P
ATOM 23 OP1 A B 19 43.559 33.581 62.234 1.00 37.70 O
ATOM 24 OP2 A B 19 44.475 31.326 63.001 1.00 37.56 O
ATOM 25 O5' A B 19 42.139 31.519 62.119 1.00 36.17 O
TER

Atoms:
OP1: (45.373,26.521,50.743)
OP2: (45.308,28.151,52.715)
C3': (41.035,26.089,50.815)
C1': (40.066,26.852,52.853)
C5': (43.027,25.175,52.149)
O4': (40.913,25.768,53.165)
C8: (41.479,28.320,54.322)
O2': (39.201,27.666,50.803)
C6: (39.271,30.196,56.284)
C5: (40.022,29.377,55.431)
C4: (39.324,28.542,54.588)
P: (45.060,26.803,52.164)
C4': (41.521,25.232,51.972)
C2': (40.407,27.319,51.451)
C2: (37.381,29.253,55.353)
N1: (37.931,30.112,56.219)
N3: (37.989,28.428,54.498)
N6: (39.825,31.044,57.150)
N7: (41.383,29.225,55.256)
N9: (40.277,27.865,53.873)
O5': (43.532,26.461,52.427)
O3': (40.057,25.360,50.124)
C4: (43.843,31.576,53.259)
N3: (44.172,30.455,53.987)
OP1: (42.407,36.922,58.950)
OP2: (43.708,36.853,56.736)
C2: (44.145,30.328,55.353)
C1': (43.660,31.444,57.539)
C3': (43.926,32.756,59.505)
O5': (42.607,34.795,57.654)
O4': (42.379,31.891,57.922)
C5': (41.887,34.135,58.707)
P: (42.572,36.396,57.572)
C4': (42.471,32.775,59.064)
C2': (44.661,32.370,58.224)
O2': (45.874,31.688,58.468)
N1: (43.734,31.459,56.046)
O4: (43.923,31.544,52.042)
O2: (44.470,29.281,55.881)
C6: (43.376,32.612,55.375)
C5: (43.416,32.711,54.039)
O3': (44.104,31.795,60.559)
Image (generated by PyMOL):
PyMOL image
show in jmol