Doublet info:
Details
Nucleotide types:
AU
Description:
None: None
Program used:
None
Has errors:
False
Source
PDB id:
3U5D:11951:12727
Extra
PDB:
ATOM 1 O3' A A1950 3.704 14.594 86.609 1.00 37.59 O
ATOM 2 P A A1951 2.701 14.060 87.713 1.00 40.95 P
ATOM 3 OP1 A A1951 1.581 15.021 87.761 1.00 41.32 O
ATOM 4 OP2 A A1951 3.487 13.814 88.944 1.00 40.93 O
ATOM 5 O5' A A1951 2.228 12.683 87.101 1.00 40.74 O
ATOM 6 C5' A A1951 0.922 12.225 87.325 1.00 40.93 C
ATOM 7 C4' A A1951 0.670 10.955 86.605 1.00 40.70 C
ATOM 8 O4' A A1951 0.628 11.216 85.188 1.00 40.60 O
ATOM 9 C3' A A1951 1.730 9.881 86.807 1.00 40.38 C
ATOM 10 O3' A A1951 1.104 8.660 87.022 1.00 40.35 O
ATOM 11 C2' A A1951 2.403 9.785 85.469 1.00 40.11 C
ATOM 12 O2' A A1951 2.836 8.491 85.200 1.00 39.83 O
ATOM 13 C1' A A1951 1.264 10.162 84.558 1.00 40.27 C
ATOM 14 N9 A A1951 1.629 10.524 83.196 1.00 40.13 N
ATOM 15 C8 A A1951 2.855 10.544 82.669 1.00 39.87 C
ATOM 16 N7 A A1951 2.860 10.782 81.393 1.00 39.80 N
ATOM 17 C5 A A1951 1.542 10.886 81.038 1.00 40.02 C
ATOM 18 C6 A A1951 0.922 11.157 79.816 1.00 40.09 C
ATOM 19 N6 A A1951 1.591 11.371 78.695 1.00 39.92 N
ATOM 20 N1 A A1951 -0.408 11.217 79.753 1.00 40.35 N
ATOM 21 C2 A A1951 -1.050 11.008 80.896 1.00 40.52 C
ATOM 22 N3 A A1951 -0.573 10.757 82.119 1.00 40.48 N
ATOM 23 C4 A A1951 0.765 10.697 82.133 1.00 40.22 C
ATOM 24 P A A1952 1.368 7.850 88.349 1.00 40.01 P
ATOM 25 OP1 A A1952 0.579 6.571 88.251 1.00 39.98 O
ATOM 26 OP2 A A1952 1.114 8.780 89.471 1.00 40.31 O
ATOM 27 O5' A A1952 2.913 7.520 88.253 1.00 39.69 O
TER
ATOM 1 O3' U B2726 2.652 10.036 73.759 1.00 53.55 O
ATOM 2 P U B2727 3.751 11.079 73.259 1.00 44.49 P
ATOM 3 OP1 U B2727 2.998 12.218 72.708 1.00 44.77 O
ATOM 4 OP2 U B2727 4.702 10.361 72.384 1.00 44.20 O
ATOM 5 O5' U B2727 4.487 11.511 74.610 1.00 44.46 O
ATOM 6 C5' U B2727 3.822 12.311 75.571 1.00 44.73 C
ATOM 7 C4' U B2727 4.449 12.194 76.933 1.00 44.67 C
ATOM 8 O4' U B2727 4.521 10.805 77.352 1.00 44.48 O
ATOM 9 C3' U B2727 5.873 12.656 77.052 1.00 44.50 C
ATOM 10 O3' U B2727 6.023 14.052 77.013 1.00 44.69 O
ATOM 11 C2' U B2727 6.291 12.004 78.364 1.00 44.41 C
ATOM 12 O2' U B2727 5.704 12.650 79.498 1.00 44.68 O
ATOM 13 C1' U B2727 5.636 10.634 78.197 1.00 44.31 C
ATOM 14 N1 U B2727 6.559 9.667 77.567 1.00 44.00 N
ATOM 15 C2 U B2727 7.516 8.997 78.358 1.00 43.80 C
ATOM 16 O2 U B2727 7.673 9.111 79.580 1.00 43.87 O
ATOM 17 N3 U B2727 8.283 8.118 77.663 1.00 43.53 N
ATOM 18 C4 U B2727 8.238 7.879 76.327 1.00 43.44 C
ATOM 19 O4 U B2727 9.027 7.068 75.881 1.00 43.20 O
ATOM 20 C5 U B2727 7.285 8.616 75.570 1.00 43.64 C
ATOM 21 C6 U B2727 6.485 9.466 76.209 1.00 43.91 C
ATOM 22 P A B2728 7.270 14.684 76.246 1.00 45.04 P
ATOM 23 OP1 A B2728 6.948 16.090 75.927 1.00 45.31 O
ATOM 24 OP2 A B2728 7.589 13.787 75.134 1.00 44.79 O
ATOM 25 O5' A B2728 8.415 14.624 77.349 1.00 44.91 O
TER
ATOM 2 P A A1951 2.701 14.060 87.713 1.00 40.95 P
ATOM 3 OP1 A A1951 1.581 15.021 87.761 1.00 41.32 O
ATOM 4 OP2 A A1951 3.487 13.814 88.944 1.00 40.93 O
ATOM 5 O5' A A1951 2.228 12.683 87.101 1.00 40.74 O
ATOM 6 C5' A A1951 0.922 12.225 87.325 1.00 40.93 C
ATOM 7 C4' A A1951 0.670 10.955 86.605 1.00 40.70 C
ATOM 8 O4' A A1951 0.628 11.216 85.188 1.00 40.60 O
ATOM 9 C3' A A1951 1.730 9.881 86.807 1.00 40.38 C
ATOM 10 O3' A A1951 1.104 8.660 87.022 1.00 40.35 O
ATOM 11 C2' A A1951 2.403 9.785 85.469 1.00 40.11 C
ATOM 12 O2' A A1951 2.836 8.491 85.200 1.00 39.83 O
ATOM 13 C1' A A1951 1.264 10.162 84.558 1.00 40.27 C
ATOM 14 N9 A A1951 1.629 10.524 83.196 1.00 40.13 N
ATOM 15 C8 A A1951 2.855 10.544 82.669 1.00 39.87 C
ATOM 16 N7 A A1951 2.860 10.782 81.393 1.00 39.80 N
ATOM 17 C5 A A1951 1.542 10.886 81.038 1.00 40.02 C
ATOM 18 C6 A A1951 0.922 11.157 79.816 1.00 40.09 C
ATOM 19 N6 A A1951 1.591 11.371 78.695 1.00 39.92 N
ATOM 20 N1 A A1951 -0.408 11.217 79.753 1.00 40.35 N
ATOM 21 C2 A A1951 -1.050 11.008 80.896 1.00 40.52 C
ATOM 22 N3 A A1951 -0.573 10.757 82.119 1.00 40.48 N
ATOM 23 C4 A A1951 0.765 10.697 82.133 1.00 40.22 C
ATOM 24 P A A1952 1.368 7.850 88.349 1.00 40.01 P
ATOM 25 OP1 A A1952 0.579 6.571 88.251 1.00 39.98 O
ATOM 26 OP2 A A1952 1.114 8.780 89.471 1.00 40.31 O
ATOM 27 O5' A A1952 2.913 7.520 88.253 1.00 39.69 O
TER
ATOM 1 O3' U B2726 2.652 10.036 73.759 1.00 53.55 O
ATOM 2 P U B2727 3.751 11.079 73.259 1.00 44.49 P
ATOM 3 OP1 U B2727 2.998 12.218 72.708 1.00 44.77 O
ATOM 4 OP2 U B2727 4.702 10.361 72.384 1.00 44.20 O
ATOM 5 O5' U B2727 4.487 11.511 74.610 1.00 44.46 O
ATOM 6 C5' U B2727 3.822 12.311 75.571 1.00 44.73 C
ATOM 7 C4' U B2727 4.449 12.194 76.933 1.00 44.67 C
ATOM 8 O4' U B2727 4.521 10.805 77.352 1.00 44.48 O
ATOM 9 C3' U B2727 5.873 12.656 77.052 1.00 44.50 C
ATOM 10 O3' U B2727 6.023 14.052 77.013 1.00 44.69 O
ATOM 11 C2' U B2727 6.291 12.004 78.364 1.00 44.41 C
ATOM 12 O2' U B2727 5.704 12.650 79.498 1.00 44.68 O
ATOM 13 C1' U B2727 5.636 10.634 78.197 1.00 44.31 C
ATOM 14 N1 U B2727 6.559 9.667 77.567 1.00 44.00 N
ATOM 15 C2 U B2727 7.516 8.997 78.358 1.00 43.80 C
ATOM 16 O2 U B2727 7.673 9.111 79.580 1.00 43.87 O
ATOM 17 N3 U B2727 8.283 8.118 77.663 1.00 43.53 N
ATOM 18 C4 U B2727 8.238 7.879 76.327 1.00 43.44 C
ATOM 19 O4 U B2727 9.027 7.068 75.881 1.00 43.20 O
ATOM 20 C5 U B2727 7.285 8.616 75.570 1.00 43.64 C
ATOM 21 C6 U B2727 6.485 9.466 76.209 1.00 43.91 C
ATOM 22 P A B2728 7.270 14.684 76.246 1.00 45.04 P
ATOM 23 OP1 A B2728 6.948 16.090 75.927 1.00 45.31 O
ATOM 24 OP2 A B2728 7.589 13.787 75.134 1.00 44.79 O
ATOM 25 O5' A B2728 8.415 14.624 77.349 1.00 44.91 O
TER
Atoms:
OP1: (1.581,15.021,87.761)
OP2: (3.487,13.814,88.944)
C3': (1.730,9.881,86.807)
C1': (1.264,10.162,84.558)
C5': (0.922,12.225,87.325)
O4': (0.628,11.216,85.188)
C8: (2.855,10.544,82.669)
O2': (2.836,8.491,85.200)
C6: (0.922,11.157,79.816)
C5: (1.542,10.886,81.038)
C4: (0.765,10.697,82.133)
P: (2.701,14.060,87.713)
C4': (0.670,10.955,86.605)
C2': (2.403,9.785,85.469)
C2: (-1.050,11.008,80.896)
N1: (-0.408,11.217,79.753)
N3: (-0.573,10.757,82.119)
N6: (1.591,11.371,78.695)
N7: (2.860,10.782,81.393)
N9: (1.629,10.524,83.196)
O5': (2.228,12.683,87.101)
O3': (1.104,8.660,87.022)
OP2: (3.487,13.814,88.944)
C3': (1.730,9.881,86.807)
C1': (1.264,10.162,84.558)
C5': (0.922,12.225,87.325)
O4': (0.628,11.216,85.188)
C8: (2.855,10.544,82.669)
O2': (2.836,8.491,85.200)
C6: (0.922,11.157,79.816)
C5: (1.542,10.886,81.038)
C4: (0.765,10.697,82.133)
P: (2.701,14.060,87.713)
C4': (0.670,10.955,86.605)
C2': (2.403,9.785,85.469)
C2: (-1.050,11.008,80.896)
N1: (-0.408,11.217,79.753)
N3: (-0.573,10.757,82.119)
N6: (1.591,11.371,78.695)
N7: (2.860,10.782,81.393)
N9: (1.629,10.524,83.196)
O5': (2.228,12.683,87.101)
O3': (1.104,8.660,87.022)
C4: (8.238,7.879,76.327)
N3: (8.283,8.118,77.663)
OP1: (2.998,12.218,72.708)
OP2: (4.702,10.361,72.384)
C2: (7.516,8.997,78.358)
C1': (5.636,10.634,78.197)
C3': (5.873,12.656,77.052)
O5': (4.487,11.511,74.610)
O4': (4.521,10.805,77.352)
C5': (3.822,12.311,75.571)
P: (3.751,11.079,73.259)
C4': (4.449,12.194,76.933)
C2': (6.291,12.004,78.364)
O2': (5.704,12.650,79.498)
N1: (6.559,9.667,77.567)
O4: (9.027,7.068,75.881)
O2: (7.673,9.111,79.580)
C6: (6.485,9.466,76.209)
C5: (7.285,8.616,75.570)
O3': (6.023,14.052,77.013)
N3: (8.283,8.118,77.663)
OP1: (2.998,12.218,72.708)
OP2: (4.702,10.361,72.384)
C2: (7.516,8.997,78.358)
C1': (5.636,10.634,78.197)
C3': (5.873,12.656,77.052)
O5': (4.487,11.511,74.610)
O4': (4.521,10.805,77.352)
C5': (3.822,12.311,75.571)
P: (3.751,11.079,73.259)
C4': (4.449,12.194,76.933)
C2': (6.291,12.004,78.364)
O2': (5.704,12.650,79.498)
N1: (6.559,9.667,77.567)
O4: (9.027,7.068,75.881)
O2: (7.673,9.111,79.580)
C6: (6.485,9.466,76.209)
C5: (7.285,8.616,75.570)
O3': (6.023,14.052,77.013)
Image (generated by PyMOL):