Doublet info:
Details
Nucleotide types:
AU
Description:
None: None
Program used:
None
Has errors:
False
Source
PDB id:
3U5D:12479:1900
Extra
PDB:
ATOM 1 O3' C A2478 43.783 -41.042 56.802 1.00 40.81 O
ATOM 2 P A A2479 45.219 -40.667 56.182 1.00 37.89 P
ATOM 3 OP1 A A2479 45.311 -39.189 56.068 1.00 37.60 O
ATOM 4 OP2 A A2479 45.364 -41.488 54.969 1.00 38.14 O
ATOM 5 O5' A A2479 46.216 -41.171 57.324 1.00 37.94 O
ATOM 6 C5' A A2479 47.423 -40.479 57.636 1.00 37.80 C
ATOM 7 C4' A A2479 48.193 -41.188 58.718 1.00 37.92 C
ATOM 8 O4' A A2479 47.590 -40.873 59.989 1.00 37.77 O
ATOM 9 C3' A A2479 48.200 -42.700 58.631 1.00 38.24 C
ATOM 10 O3' A A2479 49.432 -43.212 59.147 1.00 38.37 O
ATOM 11 C2' A A2479 47.021 -43.078 59.537 1.00 38.25 C
ATOM 12 O2' A A2479 46.996 -44.412 60.040 1.00 38.52 O
ATOM 13 C1' A A2479 47.093 -42.027 60.625 1.00 37.98 C
ATOM 14 N9 A A2479 45.789 -41.650 61.184 1.00 37.84 N
ATOM 15 C8 A A2479 44.892 -40.943 60.439 1.00 37.71 C
ATOM 16 N7 A A2479 43.804 -40.633 61.095 1.00 37.60 N
ATOM 17 C5 A A2479 43.968 -41.174 62.369 1.00 37.67 C
ATOM 18 C6 A A2479 43.142 -41.209 63.529 1.00 37.63 C
ATOM 19 N6 A A2479 41.931 -40.651 63.644 1.00 37.51 N
ATOM 20 N1 A A2479 43.597 -41.842 64.631 1.00 37.75 N
ATOM 21 C2 A A2479 44.797 -42.373 64.529 1.00 37.89 C
ATOM 22 N3 A A2479 45.627 -42.413 63.504 1.00 37.93 N
ATOM 23 C4 A A2479 45.187 -41.784 62.427 1.00 37.82 C
ATOM 24 P G A2480 50.795 -43.146 58.270 1.00 40.46 P
ATOM 25 OP1 G A2480 51.883 -43.586 59.167 1.00 40.57 O
ATOM 26 OP2 G A2480 50.882 -41.818 57.647 1.00 40.21 O
ATOM 27 O5' G A2480 50.552 -44.212 57.134 1.00 40.75 O
TER
ATOM 1 O3' U B 899 41.225 -35.763 54.833 1.00 35.09 O
ATOM 2 P U B 900 39.940 -35.601 55.770 1.00 36.76 P
ATOM 3 OP1 U B 900 38.824 -36.212 55.083 1.00 36.93 O
ATOM 4 OP2 U B 900 39.847 -34.165 56.135 1.00 36.49 O
ATOM 5 O5' U B 900 40.324 -36.460 57.058 1.00 36.81 O
ATOM 6 C5' U B 900 40.323 -37.863 57.081 1.00 37.07 C
ATOM 7 C4' U B 900 40.884 -38.326 58.377 1.00 37.07 C
ATOM 8 O4' U B 900 42.218 -37.808 58.505 1.00 36.97 O
ATOM 9 C3' U B 900 40.200 -37.784 59.613 1.00 36.91 C
ATOM 10 O3' U B 900 39.055 -38.504 59.949 1.00 37.03 O
ATOM 11 C2' U B 900 41.295 -37.868 60.674 1.00 36.87 C
ATOM 12 O2' U B 900 41.450 -39.196 61.159 1.00 37.11 O
ATOM 13 C1' U B 900 42.517 -37.520 59.860 1.00 36.85 C
ATOM 14 N1 U B 900 42.818 -36.116 59.967 1.00 36.60 N
ATOM 15 C2 U B 900 43.448 -35.715 61.090 1.00 36.49 C
ATOM 16 O2 U B 900 43.750 -36.496 61.954 1.00 36.60 O
ATOM 17 N3 U B 900 43.713 -34.380 61.150 1.00 36.26 N
ATOM 18 C4 U B 900 43.411 -33.479 60.176 1.00 36.15 C
ATOM 19 O4 U B 900 43.704 -32.312 60.328 1.00 35.97 O
ATOM 20 C5 U B 900 42.781 -33.992 59.031 1.00 36.28 C
ATOM 21 C6 U B 900 42.498 -35.263 58.980 1.00 36.49 C
ATOM 22 P C B 901 37.764 -37.759 60.548 1.00 33.01 P
ATOM 23 OP1 C B 901 36.595 -38.711 60.306 1.00 33.22 O
ATOM 24 OP2 C B 901 37.730 -36.405 59.987 1.00 32.79 O
ATOM 25 O5' C B 901 38.108 -37.638 62.092 1.00 32.92 O
TER
ATOM 2 P A A2479 45.219 -40.667 56.182 1.00 37.89 P
ATOM 3 OP1 A A2479 45.311 -39.189 56.068 1.00 37.60 O
ATOM 4 OP2 A A2479 45.364 -41.488 54.969 1.00 38.14 O
ATOM 5 O5' A A2479 46.216 -41.171 57.324 1.00 37.94 O
ATOM 6 C5' A A2479 47.423 -40.479 57.636 1.00 37.80 C
ATOM 7 C4' A A2479 48.193 -41.188 58.718 1.00 37.92 C
ATOM 8 O4' A A2479 47.590 -40.873 59.989 1.00 37.77 O
ATOM 9 C3' A A2479 48.200 -42.700 58.631 1.00 38.24 C
ATOM 10 O3' A A2479 49.432 -43.212 59.147 1.00 38.37 O
ATOM 11 C2' A A2479 47.021 -43.078 59.537 1.00 38.25 C
ATOM 12 O2' A A2479 46.996 -44.412 60.040 1.00 38.52 O
ATOM 13 C1' A A2479 47.093 -42.027 60.625 1.00 37.98 C
ATOM 14 N9 A A2479 45.789 -41.650 61.184 1.00 37.84 N
ATOM 15 C8 A A2479 44.892 -40.943 60.439 1.00 37.71 C
ATOM 16 N7 A A2479 43.804 -40.633 61.095 1.00 37.60 N
ATOM 17 C5 A A2479 43.968 -41.174 62.369 1.00 37.67 C
ATOM 18 C6 A A2479 43.142 -41.209 63.529 1.00 37.63 C
ATOM 19 N6 A A2479 41.931 -40.651 63.644 1.00 37.51 N
ATOM 20 N1 A A2479 43.597 -41.842 64.631 1.00 37.75 N
ATOM 21 C2 A A2479 44.797 -42.373 64.529 1.00 37.89 C
ATOM 22 N3 A A2479 45.627 -42.413 63.504 1.00 37.93 N
ATOM 23 C4 A A2479 45.187 -41.784 62.427 1.00 37.82 C
ATOM 24 P G A2480 50.795 -43.146 58.270 1.00 40.46 P
ATOM 25 OP1 G A2480 51.883 -43.586 59.167 1.00 40.57 O
ATOM 26 OP2 G A2480 50.882 -41.818 57.647 1.00 40.21 O
ATOM 27 O5' G A2480 50.552 -44.212 57.134 1.00 40.75 O
TER
ATOM 1 O3' U B 899 41.225 -35.763 54.833 1.00 35.09 O
ATOM 2 P U B 900 39.940 -35.601 55.770 1.00 36.76 P
ATOM 3 OP1 U B 900 38.824 -36.212 55.083 1.00 36.93 O
ATOM 4 OP2 U B 900 39.847 -34.165 56.135 1.00 36.49 O
ATOM 5 O5' U B 900 40.324 -36.460 57.058 1.00 36.81 O
ATOM 6 C5' U B 900 40.323 -37.863 57.081 1.00 37.07 C
ATOM 7 C4' U B 900 40.884 -38.326 58.377 1.00 37.07 C
ATOM 8 O4' U B 900 42.218 -37.808 58.505 1.00 36.97 O
ATOM 9 C3' U B 900 40.200 -37.784 59.613 1.00 36.91 C
ATOM 10 O3' U B 900 39.055 -38.504 59.949 1.00 37.03 O
ATOM 11 C2' U B 900 41.295 -37.868 60.674 1.00 36.87 C
ATOM 12 O2' U B 900 41.450 -39.196 61.159 1.00 37.11 O
ATOM 13 C1' U B 900 42.517 -37.520 59.860 1.00 36.85 C
ATOM 14 N1 U B 900 42.818 -36.116 59.967 1.00 36.60 N
ATOM 15 C2 U B 900 43.448 -35.715 61.090 1.00 36.49 C
ATOM 16 O2 U B 900 43.750 -36.496 61.954 1.00 36.60 O
ATOM 17 N3 U B 900 43.713 -34.380 61.150 1.00 36.26 N
ATOM 18 C4 U B 900 43.411 -33.479 60.176 1.00 36.15 C
ATOM 19 O4 U B 900 43.704 -32.312 60.328 1.00 35.97 O
ATOM 20 C5 U B 900 42.781 -33.992 59.031 1.00 36.28 C
ATOM 21 C6 U B 900 42.498 -35.263 58.980 1.00 36.49 C
ATOM 22 P C B 901 37.764 -37.759 60.548 1.00 33.01 P
ATOM 23 OP1 C B 901 36.595 -38.711 60.306 1.00 33.22 O
ATOM 24 OP2 C B 901 37.730 -36.405 59.987 1.00 32.79 O
ATOM 25 O5' C B 901 38.108 -37.638 62.092 1.00 32.92 O
TER
Atoms:
OP1: (45.311,-39.189,56.068)
OP2: (45.364,-41.488,54.969)
C3': (48.200,-42.700,58.631)
C1': (47.093,-42.027,60.625)
C5': (47.423,-40.479,57.636)
O4': (47.590,-40.873,59.989)
C8: (44.892,-40.943,60.439)
O2': (46.996,-44.412,60.040)
C6: (43.142,-41.209,63.529)
C5: (43.968,-41.174,62.369)
C4: (45.187,-41.784,62.427)
P: (45.219,-40.667,56.182)
C4': (48.193,-41.188,58.718)
C2': (47.021,-43.078,59.537)
C2: (44.797,-42.373,64.529)
N1: (43.597,-41.842,64.631)
N3: (45.627,-42.413,63.504)
N6: (41.931,-40.651,63.644)
N7: (43.804,-40.633,61.095)
N9: (45.789,-41.650,61.184)
O5': (46.216,-41.171,57.324)
O3': (49.432,-43.212,59.147)
OP2: (45.364,-41.488,54.969)
C3': (48.200,-42.700,58.631)
C1': (47.093,-42.027,60.625)
C5': (47.423,-40.479,57.636)
O4': (47.590,-40.873,59.989)
C8: (44.892,-40.943,60.439)
O2': (46.996,-44.412,60.040)
C6: (43.142,-41.209,63.529)
C5: (43.968,-41.174,62.369)
C4: (45.187,-41.784,62.427)
P: (45.219,-40.667,56.182)
C4': (48.193,-41.188,58.718)
C2': (47.021,-43.078,59.537)
C2: (44.797,-42.373,64.529)
N1: (43.597,-41.842,64.631)
N3: (45.627,-42.413,63.504)
N6: (41.931,-40.651,63.644)
N7: (43.804,-40.633,61.095)
N9: (45.789,-41.650,61.184)
O5': (46.216,-41.171,57.324)
O3': (49.432,-43.212,59.147)
C4: (43.411,-33.479,60.176)
N3: (43.713,-34.380,61.150)
OP1: (38.824,-36.212,55.083)
OP2: (39.847,-34.165,56.135)
C2: (43.448,-35.715,61.090)
C1': (42.517,-37.520,59.860)
C3': (40.200,-37.784,59.613)
O5': (40.324,-36.460,57.058)
O4': (42.218,-37.808,58.505)
C5': (40.323,-37.863,57.081)
P: (39.940,-35.601,55.770)
C4': (40.884,-38.326,58.377)
C2': (41.295,-37.868,60.674)
O2': (41.450,-39.196,61.159)
N1: (42.818,-36.116,59.967)
O4: (43.704,-32.312,60.328)
O2: (43.750,-36.496,61.954)
C6: (42.498,-35.263,58.980)
C5: (42.781,-33.992,59.031)
O3': (39.055,-38.504,59.949)
N3: (43.713,-34.380,61.150)
OP1: (38.824,-36.212,55.083)
OP2: (39.847,-34.165,56.135)
C2: (43.448,-35.715,61.090)
C1': (42.517,-37.520,59.860)
C3': (40.200,-37.784,59.613)
O5': (40.324,-36.460,57.058)
O4': (42.218,-37.808,58.505)
C5': (40.323,-37.863,57.081)
P: (39.940,-35.601,55.770)
C4': (40.884,-38.326,58.377)
C2': (41.295,-37.868,60.674)
O2': (41.450,-39.196,61.159)
N1: (42.818,-36.116,59.967)
O4: (43.704,-32.312,60.328)
O2: (43.750,-36.496,61.954)
C6: (42.498,-35.263,58.980)
C5: (42.781,-33.992,59.031)
O3': (39.055,-38.504,59.949)
Image (generated by PyMOL):