Doublet info:
Details
Nucleotide types:
AU
Description:
None: None
Program used:
None
Has errors:
False
Source
PDB id:
3U5D:12663:12638
Extra
PDB:
ATOM 1 O3' A A2662 21.884 24.124 26.164 1.00 48.41 O
ATOM 2 P A A2663 22.673 23.223 27.198 1.00 49.35 P
ATOM 3 OP1 A A2663 23.961 23.902 27.430 1.00 49.26 O
ATOM 4 OP2 A A2663 22.662 21.817 26.696 1.00 49.21 O
ATOM 5 O5' A A2663 21.753 23.344 28.458 1.00 49.19 O
ATOM 6 C5' A A2663 21.093 24.558 28.709 1.00 49.46 C
ATOM 7 C4' A A2663 21.250 24.948 30.123 1.00 49.19 C
ATOM 8 O4' A A2663 20.187 24.334 30.862 1.00 49.05 O
ATOM 9 C3' A A2663 22.527 24.464 30.743 1.00 48.78 C
ATOM 10 O3' A A2663 22.921 25.356 31.767 1.00 48.69 O
ATOM 11 C2' A A2663 22.141 23.123 31.322 1.00 48.44 C
ATOM 12 O2' A A2663 22.905 22.730 32.426 1.00 48.03 O
ATOM 13 C1' A A2663 20.687 23.327 31.698 1.00 48.59 C
ATOM 14 N9 A A2663 19.865 22.133 31.504 1.00 48.52 N
ATOM 15 C8 A A2663 20.176 21.030 30.787 1.00 48.43 C
ATOM 16 N7 A A2663 19.255 20.120 30.811 1.00 48.39 N
ATOM 17 C5 A A2663 18.278 20.675 31.612 1.00 48.45 C
ATOM 18 C6 A A2663 17.038 20.214 32.047 1.00 48.45 C
ATOM 19 N6 A A2663 16.555 19.020 31.712 1.00 48.39 N
ATOM 20 N1 A A2663 16.281 21.013 32.822 1.00 48.55 N
ATOM 21 C2 A A2663 16.787 22.196 33.143 1.00 48.62 C
ATOM 22 N3 A A2663 17.944 22.733 32.796 1.00 48.63 N
ATOM 23 C4 A A2663 18.641 21.910 32.030 1.00 48.53 C
ATOM 24 P G A2664 24.172 26.346 31.496 1.00 49.25 P
ATOM 25 OP1 G A2664 24.881 25.853 30.258 1.00 49.33 O
ATOM 26 OP2 G A2664 24.951 26.440 32.777 1.00 48.90 O
ATOM 27 O5' G A2664 23.473 27.746 31.168 1.00 49.71 O
TER
ATOM 1 O3' C B2637 24.918 16.105 32.445 1.00 39.38 O
ATOM 2 P U B2638 24.539 16.853 31.102 1.00 47.94 P
ATOM 3 OP1 U B2638 25.447 16.399 30.061 1.00 48.00 O
ATOM 4 OP2 U B2638 24.487 18.278 31.414 1.00 48.10 O
ATOM 5 O5' U B2638 23.092 16.308 30.833 1.00 48.09 O
ATOM 6 C5' U B2638 22.717 15.025 31.294 1.00 47.84 C
ATOM 7 C4' U B2638 21.233 14.840 31.219 1.00 48.02 C
ATOM 8 O4' U B2638 20.619 15.396 32.424 1.00 47.92 O
ATOM 9 C3' U B2638 20.571 15.530 30.034 1.00 48.48 C
ATOM 10 O3' U B2638 19.566 14.692 29.487 1.00 48.63 O
ATOM 11 C2' U B2638 19.936 16.762 30.675 1.00 48.61 C
ATOM 12 O2' U B2638 18.817 17.294 29.984 1.00 49.01 O
ATOM 13 C1' U B2638 19.571 16.248 32.062 1.00 48.27 C
ATOM 14 N1 U B2638 19.469 17.323 33.047 1.00 48.24 N
ATOM 15 C2 U B2638 18.358 17.449 33.849 1.00 48.25 C
ATOM 16 O2 U B2638 17.483 16.610 33.856 1.00 48.24 O
ATOM 17 N3 U B2638 18.319 18.548 34.663 1.00 48.27 N
ATOM 18 C4 U B2638 19.267 19.532 34.707 1.00 48.29 C
ATOM 19 O4 U B2638 19.146 20.516 35.430 1.00 48.34 O
ATOM 20 C5 U B2638 20.385 19.318 33.851 1.00 48.28 C
ATOM 21 C6 U B2638 20.441 18.260 33.043 1.00 48.26 C
ATOM 22 P A B2639 19.619 14.293 27.940 1.00 53.26 P
ATOM 23 OP1 A B2639 20.948 13.755 27.712 1.00 53.06 O
ATOM 24 OP2 A B2639 19.129 15.504 27.135 1.00 53.70 O
ATOM 25 O5' A B2639 18.540 13.143 27.806 1.00 53.29 O
TER
ATOM 2 P A A2663 22.673 23.223 27.198 1.00 49.35 P
ATOM 3 OP1 A A2663 23.961 23.902 27.430 1.00 49.26 O
ATOM 4 OP2 A A2663 22.662 21.817 26.696 1.00 49.21 O
ATOM 5 O5' A A2663 21.753 23.344 28.458 1.00 49.19 O
ATOM 6 C5' A A2663 21.093 24.558 28.709 1.00 49.46 C
ATOM 7 C4' A A2663 21.250 24.948 30.123 1.00 49.19 C
ATOM 8 O4' A A2663 20.187 24.334 30.862 1.00 49.05 O
ATOM 9 C3' A A2663 22.527 24.464 30.743 1.00 48.78 C
ATOM 10 O3' A A2663 22.921 25.356 31.767 1.00 48.69 O
ATOM 11 C2' A A2663 22.141 23.123 31.322 1.00 48.44 C
ATOM 12 O2' A A2663 22.905 22.730 32.426 1.00 48.03 O
ATOM 13 C1' A A2663 20.687 23.327 31.698 1.00 48.59 C
ATOM 14 N9 A A2663 19.865 22.133 31.504 1.00 48.52 N
ATOM 15 C8 A A2663 20.176 21.030 30.787 1.00 48.43 C
ATOM 16 N7 A A2663 19.255 20.120 30.811 1.00 48.39 N
ATOM 17 C5 A A2663 18.278 20.675 31.612 1.00 48.45 C
ATOM 18 C6 A A2663 17.038 20.214 32.047 1.00 48.45 C
ATOM 19 N6 A A2663 16.555 19.020 31.712 1.00 48.39 N
ATOM 20 N1 A A2663 16.281 21.013 32.822 1.00 48.55 N
ATOM 21 C2 A A2663 16.787 22.196 33.143 1.00 48.62 C
ATOM 22 N3 A A2663 17.944 22.733 32.796 1.00 48.63 N
ATOM 23 C4 A A2663 18.641 21.910 32.030 1.00 48.53 C
ATOM 24 P G A2664 24.172 26.346 31.496 1.00 49.25 P
ATOM 25 OP1 G A2664 24.881 25.853 30.258 1.00 49.33 O
ATOM 26 OP2 G A2664 24.951 26.440 32.777 1.00 48.90 O
ATOM 27 O5' G A2664 23.473 27.746 31.168 1.00 49.71 O
TER
ATOM 1 O3' C B2637 24.918 16.105 32.445 1.00 39.38 O
ATOM 2 P U B2638 24.539 16.853 31.102 1.00 47.94 P
ATOM 3 OP1 U B2638 25.447 16.399 30.061 1.00 48.00 O
ATOM 4 OP2 U B2638 24.487 18.278 31.414 1.00 48.10 O
ATOM 5 O5' U B2638 23.092 16.308 30.833 1.00 48.09 O
ATOM 6 C5' U B2638 22.717 15.025 31.294 1.00 47.84 C
ATOM 7 C4' U B2638 21.233 14.840 31.219 1.00 48.02 C
ATOM 8 O4' U B2638 20.619 15.396 32.424 1.00 47.92 O
ATOM 9 C3' U B2638 20.571 15.530 30.034 1.00 48.48 C
ATOM 10 O3' U B2638 19.566 14.692 29.487 1.00 48.63 O
ATOM 11 C2' U B2638 19.936 16.762 30.675 1.00 48.61 C
ATOM 12 O2' U B2638 18.817 17.294 29.984 1.00 49.01 O
ATOM 13 C1' U B2638 19.571 16.248 32.062 1.00 48.27 C
ATOM 14 N1 U B2638 19.469 17.323 33.047 1.00 48.24 N
ATOM 15 C2 U B2638 18.358 17.449 33.849 1.00 48.25 C
ATOM 16 O2 U B2638 17.483 16.610 33.856 1.00 48.24 O
ATOM 17 N3 U B2638 18.319 18.548 34.663 1.00 48.27 N
ATOM 18 C4 U B2638 19.267 19.532 34.707 1.00 48.29 C
ATOM 19 O4 U B2638 19.146 20.516 35.430 1.00 48.34 O
ATOM 20 C5 U B2638 20.385 19.318 33.851 1.00 48.28 C
ATOM 21 C6 U B2638 20.441 18.260 33.043 1.00 48.26 C
ATOM 22 P A B2639 19.619 14.293 27.940 1.00 53.26 P
ATOM 23 OP1 A B2639 20.948 13.755 27.712 1.00 53.06 O
ATOM 24 OP2 A B2639 19.129 15.504 27.135 1.00 53.70 O
ATOM 25 O5' A B2639 18.540 13.143 27.806 1.00 53.29 O
TER
Atoms:
OP1: (23.961,23.902,27.430)
OP2: (22.662,21.817,26.696)
C3': (22.527,24.464,30.743)
C1': (20.687,23.327,31.698)
C5': (21.093,24.558,28.709)
O4': (20.187,24.334,30.862)
C8: (20.176,21.030,30.787)
O2': (22.905,22.730,32.426)
C6: (17.038,20.214,32.047)
C5: (18.278,20.675,31.612)
C4: (18.641,21.910,32.030)
P: (22.673,23.223,27.198)
C4': (21.250,24.948,30.123)
C2': (22.141,23.123,31.322)
C2: (16.787,22.196,33.143)
N1: (16.281,21.013,32.822)
N3: (17.944,22.733,32.796)
N6: (16.555,19.020,31.712)
N7: (19.255,20.120,30.811)
N9: (19.865,22.133,31.504)
O5': (21.753,23.344,28.458)
O3': (22.921,25.356,31.767)
OP2: (22.662,21.817,26.696)
C3': (22.527,24.464,30.743)
C1': (20.687,23.327,31.698)
C5': (21.093,24.558,28.709)
O4': (20.187,24.334,30.862)
C8: (20.176,21.030,30.787)
O2': (22.905,22.730,32.426)
C6: (17.038,20.214,32.047)
C5: (18.278,20.675,31.612)
C4: (18.641,21.910,32.030)
P: (22.673,23.223,27.198)
C4': (21.250,24.948,30.123)
C2': (22.141,23.123,31.322)
C2: (16.787,22.196,33.143)
N1: (16.281,21.013,32.822)
N3: (17.944,22.733,32.796)
N6: (16.555,19.020,31.712)
N7: (19.255,20.120,30.811)
N9: (19.865,22.133,31.504)
O5': (21.753,23.344,28.458)
O3': (22.921,25.356,31.767)
C4: (19.267,19.532,34.707)
N3: (18.319,18.548,34.663)
OP1: (25.447,16.399,30.061)
OP2: (24.487,18.278,31.414)
C2: (18.358,17.449,33.849)
C1': (19.571,16.248,32.062)
C3': (20.571,15.530,30.034)
O5': (23.092,16.308,30.833)
O4': (20.619,15.396,32.424)
C5': (22.717,15.025,31.294)
P: (24.539,16.853,31.102)
C4': (21.233,14.840,31.219)
C2': (19.936,16.762,30.675)
O2': (18.817,17.294,29.984)
N1: (19.469,17.323,33.047)
O4: (19.146,20.516,35.430)
O2: (17.483,16.610,33.856)
C6: (20.441,18.260,33.043)
C5: (20.385,19.318,33.851)
O3': (19.566,14.692,29.487)
N3: (18.319,18.548,34.663)
OP1: (25.447,16.399,30.061)
OP2: (24.487,18.278,31.414)
C2: (18.358,17.449,33.849)
C1': (19.571,16.248,32.062)
C3': (20.571,15.530,30.034)
O5': (23.092,16.308,30.833)
O4': (20.619,15.396,32.424)
C5': (22.717,15.025,31.294)
P: (24.539,16.853,31.102)
C4': (21.233,14.840,31.219)
C2': (19.936,16.762,30.675)
O2': (18.817,17.294,29.984)
N1: (19.469,17.323,33.047)
O4: (19.146,20.516,35.430)
O2: (17.483,16.610,33.856)
C6: (20.441,18.260,33.043)
C5: (20.385,19.318,33.851)
O3': (19.566,14.692,29.487)
Image (generated by PyMOL):