Doublet info:
Details
Nucleotide types:
GG
Description:
None: None
Program used:
None
Has errors:
False
Source
PDB id:
3OHY:A86:A85
Extra
PDB:
ATOM 1 O3' G A 85 50.304 -9.649 106.441 1.00192.69 O
ATOM 2 P G A 86 50.370 -9.038 104.954 1.00191.83 P
ATOM 3 OP1 G A 86 51.617 -8.234 104.865 1.00185.49 O
ATOM 4 OP2 G A 86 49.066 -8.370 104.693 1.00180.16 O
ATOM 5 O5' G A 86 50.502 -10.338 104.049 1.00163.77 O
ATOM 6 C5' G A 86 51.600 -10.503 103.173 1.00160.74 C
ATOM 7 C4' G A 86 52.539 -11.576 103.658 1.00161.17 C
ATOM 8 O4' G A 86 51.847 -12.478 104.558 1.00157.69 O
ATOM 9 C3' G A 86 53.106 -12.483 102.584 1.00159.85 C
ATOM 10 O3' G A 86 54.191 -11.893 101.890 1.00162.77 O
ATOM 11 C2' G A 86 53.475 -13.746 103.361 1.00152.53 C
ATOM 12 O2' G A 86 54.734 -13.594 103.998 1.00147.76 O
ATOM 13 C1' G A 86 52.383 -13.780 104.440 1.00153.17 C
ATOM 14 N9 G A 86 51.283 -14.721 104.119 1.00147.34 N
ATOM 15 C8 G A 86 49.933 -14.418 104.136 1.00143.09 C
ATOM 16 N7 G A 86 49.157 -15.429 103.838 1.00137.66 N
ATOM 17 C5 G A 86 50.046 -16.480 103.619 1.00137.03 C
ATOM 18 C6 G A 86 49.787 -17.833 103.261 1.00135.44 C
ATOM 19 O6 G A 86 48.691 -18.383 103.061 1.00135.79 O
ATOM 20 N1 G A 86 50.972 -18.558 103.139 1.00131.46 N
ATOM 21 C2 G A 86 52.239 -18.060 103.331 1.00131.67 C
ATOM 22 N2 G A 86 53.250 -18.929 103.157 1.00131.98 N
ATOM 23 N3 G A 86 52.493 -16.803 103.665 1.00131.71 N
ATOM 24 C4 G A 86 51.362 -16.068 103.795 1.00138.62 C
ATOM 25 P U A 87 54.018 -11.446 100.356 1.00180.98 P
ATOM 26 OP1 U A 87 55.095 -10.465 100.060 1.00175.22 O
ATOM 27 OP2 U A 87 52.603 -11.029 100.173 1.00166.37 O
ATOM 28 O5' U A 87 54.290 -12.807 99.576 1.00152.58 O
TER
ATOM 1 O3' U B 84 44.684 -9.608 109.765 1.00190.82 O
ATOM 2 P G B 85 45.650 -9.176 108.558 1.00191.93 P
ATOM 3 OP1 G B 85 46.163 -7.820 108.871 1.00192.76 O
ATOM 4 OP2 G B 85 44.898 -9.381 107.294 1.00188.26 O
ATOM 5 O5' G B 85 46.824 -10.239 108.669 1.00189.65 O
ATOM 6 C5' G B 85 48.031 -9.929 109.353 1.00192.45 C
ATOM 7 C4' G B 85 49.221 -10.279 108.510 1.00190.56 C
ATOM 8 O4' G B 85 49.446 -11.715 108.598 1.00186.61 O
ATOM 9 C3' G B 85 49.042 -9.968 107.025 1.00191.09 C
ATOM 10 O3' G B 85 50.304 -9.649 106.441 1.00192.69 O
ATOM 11 C2' G B 85 48.537 -11.295 106.475 1.00187.42 C
ATOM 12 O2' G B 85 48.738 -11.482 105.090 1.00184.79 O
ATOM 13 C1' G B 85 49.338 -12.290 107.310 1.00185.99 C
ATOM 14 N9 G B 85 48.696 -13.598 107.435 1.00169.48 N
ATOM 15 C8 G B 85 47.349 -13.839 107.552 1.00167.04 C
ATOM 16 N7 G B 85 47.063 -15.110 107.604 1.00165.19 N
ATOM 17 C5 G B 85 48.296 -15.740 107.501 1.00163.81 C
ATOM 18 C6 G B 85 48.621 -17.120 107.495 1.00165.48 C
ATOM 19 O6 G B 85 47.850 -18.088 107.585 1.00164.92 O
ATOM 20 N1 G B 85 50.000 -17.316 107.369 1.00164.79 N
ATOM 21 C2 G B 85 50.948 -16.322 107.264 1.00161.10 C
ATOM 22 N2 G B 85 52.227 -16.717 107.153 1.00155.88 N
ATOM 23 N3 G B 85 50.652 -15.031 107.267 1.00161.14 N
ATOM 24 C4 G B 85 49.319 -14.820 107.386 1.00164.43 C
ATOM 25 P G B 86 50.370 -9.038 104.954 1.00191.83 P
ATOM 26 OP1 G B 86 51.617 -8.234 104.865 1.00185.49 O
ATOM 27 OP2 G B 86 49.066 -8.370 104.693 1.00180.16 O
ATOM 28 O5' G B 86 50.502 -10.338 104.049 1.00163.77 O
TER
ATOM 2 P G A 86 50.370 -9.038 104.954 1.00191.83 P
ATOM 3 OP1 G A 86 51.617 -8.234 104.865 1.00185.49 O
ATOM 4 OP2 G A 86 49.066 -8.370 104.693 1.00180.16 O
ATOM 5 O5' G A 86 50.502 -10.338 104.049 1.00163.77 O
ATOM 6 C5' G A 86 51.600 -10.503 103.173 1.00160.74 C
ATOM 7 C4' G A 86 52.539 -11.576 103.658 1.00161.17 C
ATOM 8 O4' G A 86 51.847 -12.478 104.558 1.00157.69 O
ATOM 9 C3' G A 86 53.106 -12.483 102.584 1.00159.85 C
ATOM 10 O3' G A 86 54.191 -11.893 101.890 1.00162.77 O
ATOM 11 C2' G A 86 53.475 -13.746 103.361 1.00152.53 C
ATOM 12 O2' G A 86 54.734 -13.594 103.998 1.00147.76 O
ATOM 13 C1' G A 86 52.383 -13.780 104.440 1.00153.17 C
ATOM 14 N9 G A 86 51.283 -14.721 104.119 1.00147.34 N
ATOM 15 C8 G A 86 49.933 -14.418 104.136 1.00143.09 C
ATOM 16 N7 G A 86 49.157 -15.429 103.838 1.00137.66 N
ATOM 17 C5 G A 86 50.046 -16.480 103.619 1.00137.03 C
ATOM 18 C6 G A 86 49.787 -17.833 103.261 1.00135.44 C
ATOM 19 O6 G A 86 48.691 -18.383 103.061 1.00135.79 O
ATOM 20 N1 G A 86 50.972 -18.558 103.139 1.00131.46 N
ATOM 21 C2 G A 86 52.239 -18.060 103.331 1.00131.67 C
ATOM 22 N2 G A 86 53.250 -18.929 103.157 1.00131.98 N
ATOM 23 N3 G A 86 52.493 -16.803 103.665 1.00131.71 N
ATOM 24 C4 G A 86 51.362 -16.068 103.795 1.00138.62 C
ATOM 25 P U A 87 54.018 -11.446 100.356 1.00180.98 P
ATOM 26 OP1 U A 87 55.095 -10.465 100.060 1.00175.22 O
ATOM 27 OP2 U A 87 52.603 -11.029 100.173 1.00166.37 O
ATOM 28 O5' U A 87 54.290 -12.807 99.576 1.00152.58 O
TER
ATOM 1 O3' U B 84 44.684 -9.608 109.765 1.00190.82 O
ATOM 2 P G B 85 45.650 -9.176 108.558 1.00191.93 P
ATOM 3 OP1 G B 85 46.163 -7.820 108.871 1.00192.76 O
ATOM 4 OP2 G B 85 44.898 -9.381 107.294 1.00188.26 O
ATOM 5 O5' G B 85 46.824 -10.239 108.669 1.00189.65 O
ATOM 6 C5' G B 85 48.031 -9.929 109.353 1.00192.45 C
ATOM 7 C4' G B 85 49.221 -10.279 108.510 1.00190.56 C
ATOM 8 O4' G B 85 49.446 -11.715 108.598 1.00186.61 O
ATOM 9 C3' G B 85 49.042 -9.968 107.025 1.00191.09 C
ATOM 10 O3' G B 85 50.304 -9.649 106.441 1.00192.69 O
ATOM 11 C2' G B 85 48.537 -11.295 106.475 1.00187.42 C
ATOM 12 O2' G B 85 48.738 -11.482 105.090 1.00184.79 O
ATOM 13 C1' G B 85 49.338 -12.290 107.310 1.00185.99 C
ATOM 14 N9 G B 85 48.696 -13.598 107.435 1.00169.48 N
ATOM 15 C8 G B 85 47.349 -13.839 107.552 1.00167.04 C
ATOM 16 N7 G B 85 47.063 -15.110 107.604 1.00165.19 N
ATOM 17 C5 G B 85 48.296 -15.740 107.501 1.00163.81 C
ATOM 18 C6 G B 85 48.621 -17.120 107.495 1.00165.48 C
ATOM 19 O6 G B 85 47.850 -18.088 107.585 1.00164.92 O
ATOM 20 N1 G B 85 50.000 -17.316 107.369 1.00164.79 N
ATOM 21 C2 G B 85 50.948 -16.322 107.264 1.00161.10 C
ATOM 22 N2 G B 85 52.227 -16.717 107.153 1.00155.88 N
ATOM 23 N3 G B 85 50.652 -15.031 107.267 1.00161.14 N
ATOM 24 C4 G B 85 49.319 -14.820 107.386 1.00164.43 C
ATOM 25 P G B 86 50.370 -9.038 104.954 1.00191.83 P
ATOM 26 OP1 G B 86 51.617 -8.234 104.865 1.00185.49 O
ATOM 27 OP2 G B 86 49.066 -8.370 104.693 1.00180.16 O
ATOM 28 O5' G B 86 50.502 -10.338 104.049 1.00163.77 O
TER
Atoms:
OP1: (51.617,-8.234,104.865)
OP2: (49.066,-8.370,104.693)
C3': (53.106,-12.483,102.584)
C1': (52.383,-13.780,104.440)
C5': (51.600,-10.503,103.173)
O6: (48.691,-18.383,103.061)
O4': (51.847,-12.478,104.558)
C8: (49.933,-14.418,104.136)
C2: (52.239,-18.060,103.331)
C6: (49.787,-17.833,103.261)
C5: (50.046,-16.480,103.619)
C4: (51.362,-16.068,103.795)
P: (50.370,-9.038,104.954)
C4': (52.539,-11.576,103.658)
C2': (53.475,-13.746,103.361)
O2': (54.734,-13.594,103.998)
N1: (50.972,-18.558,103.139)
N2: (53.250,-18.929,103.157)
N3: (52.493,-16.803,103.665)
N7: (49.157,-15.429,103.838)
N9: (51.283,-14.721,104.119)
O5': (50.502,-10.338,104.049)
O3': (54.191,-11.893,101.890)
OP2: (49.066,-8.370,104.693)
C3': (53.106,-12.483,102.584)
C1': (52.383,-13.780,104.440)
C5': (51.600,-10.503,103.173)
O6: (48.691,-18.383,103.061)
O4': (51.847,-12.478,104.558)
C8: (49.933,-14.418,104.136)
C2: (52.239,-18.060,103.331)
C6: (49.787,-17.833,103.261)
C5: (50.046,-16.480,103.619)
C4: (51.362,-16.068,103.795)
P: (50.370,-9.038,104.954)
C4': (52.539,-11.576,103.658)
C2': (53.475,-13.746,103.361)
O2': (54.734,-13.594,103.998)
N1: (50.972,-18.558,103.139)
N2: (53.250,-18.929,103.157)
N3: (52.493,-16.803,103.665)
N7: (49.157,-15.429,103.838)
N9: (51.283,-14.721,104.119)
O5': (50.502,-10.338,104.049)
O3': (54.191,-11.893,101.890)
OP1: (46.163,-7.820,108.871)
OP2: (44.898,-9.381,107.294)
C3': (49.042,-9.968,107.025)
C1': (49.338,-12.290,107.310)
C5': (48.031,-9.929,109.353)
O6: (47.850,-18.088,107.585)
O4': (49.446,-11.715,108.598)
C8: (47.349,-13.839,107.552)
C2: (50.948,-16.322,107.264)
C6: (48.621,-17.120,107.495)
C5: (48.296,-15.740,107.501)
C4: (49.319,-14.820,107.386)
P: (45.650,-9.176,108.558)
C4': (49.221,-10.279,108.510)
C2': (48.537,-11.295,106.475)
O2': (48.738,-11.482,105.090)
N1: (50.000,-17.316,107.369)
N2: (52.227,-16.717,107.153)
N3: (50.652,-15.031,107.267)
N7: (47.063,-15.110,107.604)
N9: (48.696,-13.598,107.435)
O5': (46.824,-10.239,108.669)
O3': (50.304,-9.649,106.441)
OP2: (44.898,-9.381,107.294)
C3': (49.042,-9.968,107.025)
C1': (49.338,-12.290,107.310)
C5': (48.031,-9.929,109.353)
O6: (47.850,-18.088,107.585)
O4': (49.446,-11.715,108.598)
C8: (47.349,-13.839,107.552)
C2: (50.948,-16.322,107.264)
C6: (48.621,-17.120,107.495)
C5: (48.296,-15.740,107.501)
C4: (49.319,-14.820,107.386)
P: (45.650,-9.176,108.558)
C4': (49.221,-10.279,108.510)
C2': (48.537,-11.295,106.475)
O2': (48.738,-11.482,105.090)
N1: (50.000,-17.316,107.369)
N2: (52.227,-16.717,107.153)
N3: (50.652,-15.031,107.267)
N7: (47.063,-15.110,107.604)
N9: (48.696,-13.598,107.435)
O5': (46.824,-10.239,108.669)
O3': (50.304,-9.649,106.441)
Image (generated by PyMOL):