Doublet info:
Details
Nucleotide types:
GG
Description:
None: None
Program used:
None
Has errors:
False
Source
PDB id:
1YJW:02681:02499
Extra
PDB:
ATOM 1 O3' A A2680 41.849 162.352 107.990 1.00 34.58 O
ATOM 2 P G A2681 41.117 163.206 109.141 1.00 32.91 P
ATOM 3 OP1 G A2681 40.333 164.230 108.422 1.00 33.46 O
ATOM 4 OP2 G A2681 42.121 163.624 110.145 1.00 31.38 O
ATOM 5 O5' G A2681 40.096 162.188 109.823 1.00 33.27 O
ATOM 6 C5' G A2681 38.986 161.650 109.079 1.00 32.96 C
ATOM 7 C4' G A2681 38.412 160.424 109.765 1.00 34.16 C
ATOM 8 O4' G A2681 39.432 159.401 109.910 1.00 33.98 O
ATOM 9 C3' G A2681 37.916 160.558 111.196 1.00 34.58 C
ATOM 10 O3' G A2681 36.637 161.177 111.283 1.00 37.71 O
ATOM 11 C2' G A2681 37.795 159.096 111.601 1.00 33.83 C
ATOM 12 O2' G A2681 36.623 158.487 111.096 1.00 34.79 O
ATOM 13 C1' G A2681 39.011 158.482 110.907 1.00 34.61 C
ATOM 14 N9 G A2681 40.087 158.256 111.865 1.00 35.73 N
ATOM 15 C8 G A2681 40.390 157.069 112.485 1.00 35.25 C
ATOM 16 N7 G A2681 41.342 157.182 113.366 1.00 35.39 N
ATOM 17 C5 G A2681 41.700 158.520 113.313 1.00 37.34 C
ATOM 18 C6 G A2681 42.660 159.239 114.057 1.00 38.97 C
ATOM 19 O6 G A2681 43.391 158.833 114.966 1.00 42.20 O
ATOM 20 N1 G A2681 42.717 160.570 113.665 1.00 39.32 N
ATOM 21 C2 G A2681 41.939 161.138 112.693 1.00 39.24 C
ATOM 22 N2 G A2681 42.157 162.434 112.442 1.00 40.34 N
ATOM 23 N3 G A2681 41.019 160.485 112.013 1.00 38.76 N
ATOM 24 C4 G A2681 40.955 159.189 112.371 1.00 36.90 C
ATOM 25 P A A2682 36.270 162.091 112.557 1.00 39.29 P
ATOM 26 OP1 A A2682 34.799 162.262 112.542 1.00 39.98 O
ATOM 27 OP2 A A2682 37.143 163.285 112.511 1.00 40.53 O
ATOM 28 O5' A A2682 36.651 161.216 113.836 1.00 37.27 O
TER
ATOM 1 O3' G B2498 41.310 154.720 116.997 1.00 36.01 O
ATOM 2 P G B2499 39.727 154.940 117.169 1.00 37.79 P
ATOM 3 OP1 G B2499 39.566 156.062 118.126 1.00 36.35 O
ATOM 4 OP2 G B2499 39.079 153.628 117.456 1.00 35.87 O
ATOM 5 O5' G B2499 39.273 155.441 115.722 1.00 36.18 O
ATOM 6 C5' G B2499 37.885 155.475 115.338 1.00 35.13 C
ATOM 7 C4' G B2499 37.756 155.548 113.830 1.00 35.25 C
ATOM 8 O4' G B2499 38.497 154.461 113.211 1.00 34.35 O
ATOM 9 C3' G B2499 36.339 155.390 113.307 1.00 35.09 C
ATOM 10 O3' G B2499 35.652 156.632 113.323 1.00 38.10 O
ATOM 11 C2' G B2499 36.566 154.867 111.897 1.00 33.47 C
ATOM 12 O2' G B2499 36.938 155.885 111.001 1.00 32.89 O
ATOM 13 C1' G B2499 37.766 153.944 112.111 1.00 32.72 C
ATOM 14 N9 G B2499 37.372 152.576 112.436 1.00 31.49 N
ATOM 15 C8 G B2499 37.680 151.879 113.579 1.00 31.63 C
ATOM 16 N7 G B2499 37.173 150.678 113.600 1.00 31.12 N
ATOM 17 C5 G B2499 36.498 150.570 112.396 1.00 30.37 C
ATOM 18 C6 G B2499 35.768 149.495 111.861 1.00 29.70 C
ATOM 19 O6 G B2499 35.577 148.388 112.353 1.00 29.85 O
ATOM 20 N1 G B2499 35.238 149.802 110.615 1.00 29.95 N
ATOM 21 C2 G B2499 35.400 150.999 109.963 1.00 31.59 C
ATOM 22 N2 G B2499 34.808 151.114 108.764 1.00 31.39 N
ATOM 23 N3 G B2499 36.094 152.014 110.451 1.00 31.72 N
ATOM 24 C4 G B2499 36.610 151.731 111.664 1.00 31.04 C
ATOM 25 P U B2500 34.071 156.664 113.591 1.00 40.48 P
ATOM 26 OP1 U B2500 33.647 158.086 113.571 1.00 39.83 O
ATOM 27 OP2 U B2500 33.777 155.831 114.785 1.00 40.50 O
ATOM 28 O5' U B2500 33.465 155.949 112.308 1.00 39.10 O
TER
ATOM 2 P G A2681 41.117 163.206 109.141 1.00 32.91 P
ATOM 3 OP1 G A2681 40.333 164.230 108.422 1.00 33.46 O
ATOM 4 OP2 G A2681 42.121 163.624 110.145 1.00 31.38 O
ATOM 5 O5' G A2681 40.096 162.188 109.823 1.00 33.27 O
ATOM 6 C5' G A2681 38.986 161.650 109.079 1.00 32.96 C
ATOM 7 C4' G A2681 38.412 160.424 109.765 1.00 34.16 C
ATOM 8 O4' G A2681 39.432 159.401 109.910 1.00 33.98 O
ATOM 9 C3' G A2681 37.916 160.558 111.196 1.00 34.58 C
ATOM 10 O3' G A2681 36.637 161.177 111.283 1.00 37.71 O
ATOM 11 C2' G A2681 37.795 159.096 111.601 1.00 33.83 C
ATOM 12 O2' G A2681 36.623 158.487 111.096 1.00 34.79 O
ATOM 13 C1' G A2681 39.011 158.482 110.907 1.00 34.61 C
ATOM 14 N9 G A2681 40.087 158.256 111.865 1.00 35.73 N
ATOM 15 C8 G A2681 40.390 157.069 112.485 1.00 35.25 C
ATOM 16 N7 G A2681 41.342 157.182 113.366 1.00 35.39 N
ATOM 17 C5 G A2681 41.700 158.520 113.313 1.00 37.34 C
ATOM 18 C6 G A2681 42.660 159.239 114.057 1.00 38.97 C
ATOM 19 O6 G A2681 43.391 158.833 114.966 1.00 42.20 O
ATOM 20 N1 G A2681 42.717 160.570 113.665 1.00 39.32 N
ATOM 21 C2 G A2681 41.939 161.138 112.693 1.00 39.24 C
ATOM 22 N2 G A2681 42.157 162.434 112.442 1.00 40.34 N
ATOM 23 N3 G A2681 41.019 160.485 112.013 1.00 38.76 N
ATOM 24 C4 G A2681 40.955 159.189 112.371 1.00 36.90 C
ATOM 25 P A A2682 36.270 162.091 112.557 1.00 39.29 P
ATOM 26 OP1 A A2682 34.799 162.262 112.542 1.00 39.98 O
ATOM 27 OP2 A A2682 37.143 163.285 112.511 1.00 40.53 O
ATOM 28 O5' A A2682 36.651 161.216 113.836 1.00 37.27 O
TER
ATOM 1 O3' G B2498 41.310 154.720 116.997 1.00 36.01 O
ATOM 2 P G B2499 39.727 154.940 117.169 1.00 37.79 P
ATOM 3 OP1 G B2499 39.566 156.062 118.126 1.00 36.35 O
ATOM 4 OP2 G B2499 39.079 153.628 117.456 1.00 35.87 O
ATOM 5 O5' G B2499 39.273 155.441 115.722 1.00 36.18 O
ATOM 6 C5' G B2499 37.885 155.475 115.338 1.00 35.13 C
ATOM 7 C4' G B2499 37.756 155.548 113.830 1.00 35.25 C
ATOM 8 O4' G B2499 38.497 154.461 113.211 1.00 34.35 O
ATOM 9 C3' G B2499 36.339 155.390 113.307 1.00 35.09 C
ATOM 10 O3' G B2499 35.652 156.632 113.323 1.00 38.10 O
ATOM 11 C2' G B2499 36.566 154.867 111.897 1.00 33.47 C
ATOM 12 O2' G B2499 36.938 155.885 111.001 1.00 32.89 O
ATOM 13 C1' G B2499 37.766 153.944 112.111 1.00 32.72 C
ATOM 14 N9 G B2499 37.372 152.576 112.436 1.00 31.49 N
ATOM 15 C8 G B2499 37.680 151.879 113.579 1.00 31.63 C
ATOM 16 N7 G B2499 37.173 150.678 113.600 1.00 31.12 N
ATOM 17 C5 G B2499 36.498 150.570 112.396 1.00 30.37 C
ATOM 18 C6 G B2499 35.768 149.495 111.861 1.00 29.70 C
ATOM 19 O6 G B2499 35.577 148.388 112.353 1.00 29.85 O
ATOM 20 N1 G B2499 35.238 149.802 110.615 1.00 29.95 N
ATOM 21 C2 G B2499 35.400 150.999 109.963 1.00 31.59 C
ATOM 22 N2 G B2499 34.808 151.114 108.764 1.00 31.39 N
ATOM 23 N3 G B2499 36.094 152.014 110.451 1.00 31.72 N
ATOM 24 C4 G B2499 36.610 151.731 111.664 1.00 31.04 C
ATOM 25 P U B2500 34.071 156.664 113.591 1.00 40.48 P
ATOM 26 OP1 U B2500 33.647 158.086 113.571 1.00 39.83 O
ATOM 27 OP2 U B2500 33.777 155.831 114.785 1.00 40.50 O
ATOM 28 O5' U B2500 33.465 155.949 112.308 1.00 39.10 O
TER
Atoms:
OP1: (40.333,164.230,108.422)
OP2: (42.121,163.624,110.145)
C3': (37.916,160.558,111.196)
C1': (39.011,158.482,110.907)
C5': (38.986,161.650,109.079)
O6: (43.391,158.833,114.966)
O4': (39.432,159.401,109.910)
C8: (40.390,157.069,112.485)
C2: (41.939,161.138,112.693)
C6: (42.660,159.239,114.057)
C5: (41.700,158.520,113.313)
C4: (40.955,159.189,112.371)
P: (41.117,163.206,109.141)
C4': (38.412,160.424,109.765)
C2': (37.795,159.096,111.601)
O2': (36.623,158.487,111.096)
N1: (42.717,160.570,113.665)
N2: (42.157,162.434,112.442)
N3: (41.019,160.485,112.013)
N7: (41.342,157.182,113.366)
N9: (40.087,158.256,111.865)
O5': (40.096,162.188,109.823)
O3': (36.637,161.177,111.283)
OP2: (42.121,163.624,110.145)
C3': (37.916,160.558,111.196)
C1': (39.011,158.482,110.907)
C5': (38.986,161.650,109.079)
O6: (43.391,158.833,114.966)
O4': (39.432,159.401,109.910)
C8: (40.390,157.069,112.485)
C2: (41.939,161.138,112.693)
C6: (42.660,159.239,114.057)
C5: (41.700,158.520,113.313)
C4: (40.955,159.189,112.371)
P: (41.117,163.206,109.141)
C4': (38.412,160.424,109.765)
C2': (37.795,159.096,111.601)
O2': (36.623,158.487,111.096)
N1: (42.717,160.570,113.665)
N2: (42.157,162.434,112.442)
N3: (41.019,160.485,112.013)
N7: (41.342,157.182,113.366)
N9: (40.087,158.256,111.865)
O5': (40.096,162.188,109.823)
O3': (36.637,161.177,111.283)
OP1: (39.566,156.062,118.126)
OP2: (39.079,153.628,117.456)
C3': (36.339,155.390,113.307)
C1': (37.766,153.944,112.111)
C5': (37.885,155.475,115.338)
O6: (35.577,148.388,112.353)
O4': (38.497,154.461,113.211)
C8: (37.680,151.879,113.579)
C2: (35.400,150.999,109.963)
C6: (35.768,149.495,111.861)
C5: (36.498,150.570,112.396)
C4: (36.610,151.731,111.664)
P: (39.727,154.940,117.169)
C4': (37.756,155.548,113.830)
C2': (36.566,154.867,111.897)
O2': (36.938,155.885,111.001)
N1: (35.238,149.802,110.615)
N2: (34.808,151.114,108.764)
N3: (36.094,152.014,110.451)
N7: (37.173,150.678,113.600)
N9: (37.372,152.576,112.436)
O5': (39.273,155.441,115.722)
O3': (35.652,156.632,113.323)
OP2: (39.079,153.628,117.456)
C3': (36.339,155.390,113.307)
C1': (37.766,153.944,112.111)
C5': (37.885,155.475,115.338)
O6: (35.577,148.388,112.353)
O4': (38.497,154.461,113.211)
C8: (37.680,151.879,113.579)
C2: (35.400,150.999,109.963)
C6: (35.768,149.495,111.861)
C5: (36.498,150.570,112.396)
C4: (36.610,151.731,111.664)
P: (39.727,154.940,117.169)
C4': (37.756,155.548,113.830)
C2': (36.566,154.867,111.897)
O2': (36.938,155.885,111.001)
N1: (35.238,149.802,110.615)
N2: (34.808,151.114,108.764)
N3: (36.094,152.014,110.451)
N7: (37.173,150.678,113.600)
N9: (37.372,152.576,112.436)
O5': (39.273,155.441,115.722)
O3': (35.652,156.632,113.323)
Image (generated by PyMOL):