Doublet info:
Details
Nucleotide types:
GG
Description:
None: None
Program used:
None
Has errors:
False
Source
PDB id:
3KNI:A1397:A1396
Extra
PDB:
ATOM 1 O3' G A1396 13.551 -39.426 5.120 1.00 58.18 O
ATOM 2 P G A1397 12.485 -40.241 5.969 1.00 61.49 P
ATOM 3 OP1 G A1397 13.141 -41.512 6.365 1.00 58.76 O
ATOM 4 OP2 G A1397 11.214 -40.273 5.208 1.00 62.47 O
ATOM 5 O5' G A1397 12.231 -39.327 7.242 1.00 63.98 O
ATOM 6 C5' G A1397 13.306 -38.885 8.049 1.00 62.71 C
ATOM 7 C4' G A1397 12.817 -37.814 8.975 1.00 67.65 C
ATOM 8 O4' G A1397 12.621 -36.578 8.248 1.00 73.29 O
ATOM 9 C3' G A1397 11.468 -38.118 9.592 1.00 61.42 C
ATOM 10 O3' G A1397 11.615 -38.901 10.753 1.00 63.27 O
ATOM 11 C2' G A1397 10.910 -36.741 9.909 1.00 62.35 C
ATOM 12 O2' G A1397 11.330 -36.242 11.160 1.00 59.55 O
ATOM 13 C1' G A1397 11.502 -35.892 8.782 1.00 70.93 C
ATOM 14 N9 G A1397 10.554 -35.665 7.703 1.00 72.93 N
ATOM 15 C8 G A1397 10.711 -35.995 6.382 1.00 69.45 C
ATOM 16 N7 G A1397 9.680 -35.679 5.653 1.00 70.05 N
ATOM 17 C5 G A1397 8.793 -35.104 6.545 1.00 68.22 C
ATOM 18 C6 G A1397 7.518 -34.578 6.333 1.00 68.54 C
ATOM 19 O6 G A1397 6.888 -34.499 5.274 1.00 70.01 O
ATOM 20 N1 G A1397 6.964 -34.097 7.510 1.00 73.52 N
ATOM 21 C2 G A1397 7.579 -34.114 8.736 1.00 72.81 C
ATOM 22 N2 G A1397 6.895 -33.582 9.751 1.00 76.66 N
ATOM 23 N3 G A1397 8.775 -34.608 8.946 1.00 71.96 N
ATOM 24 C4 G A1397 9.320 -35.084 7.814 1.00 70.39 C
ATOM 25 P G A1398 10.400 -39.820 11.234 1.00 67.50 P
ATOM 26 OP1 G A1398 10.938 -40.715 12.282 1.00 76.70 O
ATOM 27 OP2 G A1398 9.798 -40.408 10.006 1.00 63.10 O
ATOM 28 O5' G A1398 9.368 -38.796 11.906 1.00 72.79 O
TER
ATOM 1 O3' G B1395 13.670 -39.575 -1.207 1.00 58.93 O
ATOM 2 P G B1396 12.658 -40.450 -0.304 1.00 68.62 P
ATOM 3 OP1 G B1396 13.159 -41.853 -0.188 1.00 59.42 O
ATOM 4 OP2 G B1396 11.312 -40.203 -0.863 1.00 69.93 O
ATOM 5 O5' G B1396 12.704 -39.768 1.137 1.00 59.07 O
ATOM 6 C5' G B1396 13.850 -39.912 1.953 1.00 58.64 C
ATOM 7 C4' G B1396 14.017 -38.719 2.858 1.00 58.54 C
ATOM 8 O4' G B1396 13.716 -37.500 2.137 1.00 59.15 O
ATOM 9 C3' G B1396 13.107 -38.624 4.064 1.00 59.18 C
ATOM 10 O3' G B1396 13.551 -39.426 5.120 1.00 58.18 O
ATOM 11 C2' G B1396 13.204 -37.153 4.432 1.00 61.82 C
ATOM 12 O2' G B1396 14.369 -36.818 5.159 1.00 61.41 O
ATOM 13 C1' G B1396 13.250 -36.507 3.053 1.00 62.14 C
ATOM 14 N9 G B1396 11.890 -36.097 2.700 1.00 64.55 N
ATOM 15 C8 G B1396 11.015 -36.717 1.835 1.00 63.31 C
ATOM 16 N7 G B1396 9.847 -36.133 1.780 1.00 62.42 N
ATOM 17 C5 G B1396 9.957 -35.054 2.650 1.00 65.36 C
ATOM 18 C6 G B1396 9.008 -34.045 3.005 1.00 69.73 C
ATOM 19 O6 G B1396 7.843 -33.901 2.609 1.00 74.47 O
ATOM 20 N1 G B1396 9.540 -33.143 3.918 1.00 66.04 N
ATOM 21 C2 G B1396 10.814 -33.193 4.425 1.00 65.37 C
ATOM 22 N2 G B1396 11.135 -32.234 5.287 1.00 65.11 N
ATOM 23 N3 G B1396 11.707 -34.117 4.109 1.00 65.61 N
ATOM 24 C4 G B1396 11.213 -35.011 3.220 1.00 63.92 C
ATOM 25 P G B1397 12.485 -40.241 5.969 1.00 61.49 P
ATOM 26 OP1 G B1397 13.141 -41.512 6.365 1.00 58.76 O
ATOM 27 OP2 G B1397 11.214 -40.273 5.208 1.00 62.47 O
ATOM 28 O5' G B1397 12.231 -39.327 7.242 1.00 63.98 O
TER
ATOM 2 P G A1397 12.485 -40.241 5.969 1.00 61.49 P
ATOM 3 OP1 G A1397 13.141 -41.512 6.365 1.00 58.76 O
ATOM 4 OP2 G A1397 11.214 -40.273 5.208 1.00 62.47 O
ATOM 5 O5' G A1397 12.231 -39.327 7.242 1.00 63.98 O
ATOM 6 C5' G A1397 13.306 -38.885 8.049 1.00 62.71 C
ATOM 7 C4' G A1397 12.817 -37.814 8.975 1.00 67.65 C
ATOM 8 O4' G A1397 12.621 -36.578 8.248 1.00 73.29 O
ATOM 9 C3' G A1397 11.468 -38.118 9.592 1.00 61.42 C
ATOM 10 O3' G A1397 11.615 -38.901 10.753 1.00 63.27 O
ATOM 11 C2' G A1397 10.910 -36.741 9.909 1.00 62.35 C
ATOM 12 O2' G A1397 11.330 -36.242 11.160 1.00 59.55 O
ATOM 13 C1' G A1397 11.502 -35.892 8.782 1.00 70.93 C
ATOM 14 N9 G A1397 10.554 -35.665 7.703 1.00 72.93 N
ATOM 15 C8 G A1397 10.711 -35.995 6.382 1.00 69.45 C
ATOM 16 N7 G A1397 9.680 -35.679 5.653 1.00 70.05 N
ATOM 17 C5 G A1397 8.793 -35.104 6.545 1.00 68.22 C
ATOM 18 C6 G A1397 7.518 -34.578 6.333 1.00 68.54 C
ATOM 19 O6 G A1397 6.888 -34.499 5.274 1.00 70.01 O
ATOM 20 N1 G A1397 6.964 -34.097 7.510 1.00 73.52 N
ATOM 21 C2 G A1397 7.579 -34.114 8.736 1.00 72.81 C
ATOM 22 N2 G A1397 6.895 -33.582 9.751 1.00 76.66 N
ATOM 23 N3 G A1397 8.775 -34.608 8.946 1.00 71.96 N
ATOM 24 C4 G A1397 9.320 -35.084 7.814 1.00 70.39 C
ATOM 25 P G A1398 10.400 -39.820 11.234 1.00 67.50 P
ATOM 26 OP1 G A1398 10.938 -40.715 12.282 1.00 76.70 O
ATOM 27 OP2 G A1398 9.798 -40.408 10.006 1.00 63.10 O
ATOM 28 O5' G A1398 9.368 -38.796 11.906 1.00 72.79 O
TER
ATOM 1 O3' G B1395 13.670 -39.575 -1.207 1.00 58.93 O
ATOM 2 P G B1396 12.658 -40.450 -0.304 1.00 68.62 P
ATOM 3 OP1 G B1396 13.159 -41.853 -0.188 1.00 59.42 O
ATOM 4 OP2 G B1396 11.312 -40.203 -0.863 1.00 69.93 O
ATOM 5 O5' G B1396 12.704 -39.768 1.137 1.00 59.07 O
ATOM 6 C5' G B1396 13.850 -39.912 1.953 1.00 58.64 C
ATOM 7 C4' G B1396 14.017 -38.719 2.858 1.00 58.54 C
ATOM 8 O4' G B1396 13.716 -37.500 2.137 1.00 59.15 O
ATOM 9 C3' G B1396 13.107 -38.624 4.064 1.00 59.18 C
ATOM 10 O3' G B1396 13.551 -39.426 5.120 1.00 58.18 O
ATOM 11 C2' G B1396 13.204 -37.153 4.432 1.00 61.82 C
ATOM 12 O2' G B1396 14.369 -36.818 5.159 1.00 61.41 O
ATOM 13 C1' G B1396 13.250 -36.507 3.053 1.00 62.14 C
ATOM 14 N9 G B1396 11.890 -36.097 2.700 1.00 64.55 N
ATOM 15 C8 G B1396 11.015 -36.717 1.835 1.00 63.31 C
ATOM 16 N7 G B1396 9.847 -36.133 1.780 1.00 62.42 N
ATOM 17 C5 G B1396 9.957 -35.054 2.650 1.00 65.36 C
ATOM 18 C6 G B1396 9.008 -34.045 3.005 1.00 69.73 C
ATOM 19 O6 G B1396 7.843 -33.901 2.609 1.00 74.47 O
ATOM 20 N1 G B1396 9.540 -33.143 3.918 1.00 66.04 N
ATOM 21 C2 G B1396 10.814 -33.193 4.425 1.00 65.37 C
ATOM 22 N2 G B1396 11.135 -32.234 5.287 1.00 65.11 N
ATOM 23 N3 G B1396 11.707 -34.117 4.109 1.00 65.61 N
ATOM 24 C4 G B1396 11.213 -35.011 3.220 1.00 63.92 C
ATOM 25 P G B1397 12.485 -40.241 5.969 1.00 61.49 P
ATOM 26 OP1 G B1397 13.141 -41.512 6.365 1.00 58.76 O
ATOM 27 OP2 G B1397 11.214 -40.273 5.208 1.00 62.47 O
ATOM 28 O5' G B1397 12.231 -39.327 7.242 1.00 63.98 O
TER
Atoms:
OP1: (13.141,-41.512,6.365)
OP2: (11.214,-40.273,5.208)
C3': (11.468,-38.118,9.592)
C1': (11.502,-35.892,8.782)
C5': (13.306,-38.885,8.049)
O6: (6.888,-34.499,5.274)
O4': (12.621,-36.578,8.248)
C8: (10.711,-35.995,6.382)
C2: (7.579,-34.114,8.736)
C6: (7.518,-34.578,6.333)
C5: (8.793,-35.104,6.545)
C4: (9.320,-35.084,7.814)
P: (12.485,-40.241,5.969)
C4': (12.817,-37.814,8.975)
C2': (10.910,-36.741,9.909)
O2': (11.330,-36.242,11.160)
N1: (6.964,-34.097,7.510)
N2: (6.895,-33.582,9.751)
N3: (8.775,-34.608,8.946)
N7: (9.680,-35.679,5.653)
N9: (10.554,-35.665,7.703)
O5': (12.231,-39.327,7.242)
O3': (11.615,-38.901,10.753)
OP2: (11.214,-40.273,5.208)
C3': (11.468,-38.118,9.592)
C1': (11.502,-35.892,8.782)
C5': (13.306,-38.885,8.049)
O6: (6.888,-34.499,5.274)
O4': (12.621,-36.578,8.248)
C8: (10.711,-35.995,6.382)
C2: (7.579,-34.114,8.736)
C6: (7.518,-34.578,6.333)
C5: (8.793,-35.104,6.545)
C4: (9.320,-35.084,7.814)
P: (12.485,-40.241,5.969)
C4': (12.817,-37.814,8.975)
C2': (10.910,-36.741,9.909)
O2': (11.330,-36.242,11.160)
N1: (6.964,-34.097,7.510)
N2: (6.895,-33.582,9.751)
N3: (8.775,-34.608,8.946)
N7: (9.680,-35.679,5.653)
N9: (10.554,-35.665,7.703)
O5': (12.231,-39.327,7.242)
O3': (11.615,-38.901,10.753)
OP1: (13.159,-41.853,-0.188)
OP2: (11.312,-40.203,-0.863)
C3': (13.107,-38.624,4.064)
C1': (13.250,-36.507,3.053)
C5': (13.850,-39.912,1.953)
O6: (7.843,-33.901,2.609)
O4': (13.716,-37.500,2.137)
C8: (11.015,-36.717,1.835)
C2: (10.814,-33.193,4.425)
C6: (9.008,-34.045,3.005)
C5: (9.957,-35.054,2.650)
C4: (11.213,-35.011,3.220)
P: (12.658,-40.450,-0.304)
C4': (14.017,-38.719,2.858)
C2': (13.204,-37.153,4.432)
O2': (14.369,-36.818,5.159)
N1: (9.540,-33.143,3.918)
N2: (11.135,-32.234,5.287)
N3: (11.707,-34.117,4.109)
N7: (9.847,-36.133,1.780)
N9: (11.890,-36.097,2.700)
O5': (12.704,-39.768,1.137)
O3': (13.551,-39.426,5.120)
OP2: (11.312,-40.203,-0.863)
C3': (13.107,-38.624,4.064)
C1': (13.250,-36.507,3.053)
C5': (13.850,-39.912,1.953)
O6: (7.843,-33.901,2.609)
O4': (13.716,-37.500,2.137)
C8: (11.015,-36.717,1.835)
C2: (10.814,-33.193,4.425)
C6: (9.008,-34.045,3.005)
C5: (9.957,-35.054,2.650)
C4: (11.213,-35.011,3.220)
P: (12.658,-40.450,-0.304)
C4': (14.017,-38.719,2.858)
C2': (13.204,-37.153,4.432)
O2': (14.369,-36.818,5.159)
N1: (9.540,-33.143,3.918)
N2: (11.135,-32.234,5.287)
N3: (11.707,-34.117,4.109)
N7: (9.847,-36.133,1.780)
N9: (11.890,-36.097,2.700)
O5': (12.704,-39.768,1.137)
O3': (13.551,-39.426,5.120)
Image (generated by PyMOL):