Doublet info:
Details
Nucleotide types:
GG
Description:
None: None
Program used:
None
Has errors:
False
Source
PDB id:
3R8N:A287:A113
Extra
PDB:
ATOM 1 O3' A A 286 -59.215 10.314 -53.913 1.00 22.25 O
ATOM 2 P G A 287 -59.332 8.989 -54.779 1.00 15.54 P
ATOM 3 OP1 G A 287 -60.544 9.129 -55.626 1.00 15.54 O
ATOM 4 OP2 G A 287 -59.247 7.855 -53.849 1.00 15.54 O
ATOM 5 O5' G A 287 -58.019 9.056 -55.681 1.00 15.54 O
ATOM 6 C5' G A 287 -57.736 10.211 -56.460 1.00 15.54 C
ATOM 7 C4' G A 287 -56.398 10.815 -56.107 1.00 15.54 C
ATOM 8 O4' G A 287 -55.344 10.103 -56.816 1.00 15.54 O
ATOM 9 C3' G A 287 -56.194 12.278 -56.514 1.00 15.54 C
ATOM 10 O3' G A 287 -56.681 13.202 -55.567 1.00 15.54 O
ATOM 11 C2' G A 287 -54.698 12.345 -56.692 1.00 15.54 C
ATOM 12 O2' G A 287 -54.045 12.303 -55.430 1.00 15.54 O
ATOM 13 C1' G A 287 -54.466 11.032 -57.407 1.00 15.54 C
ATOM 14 N9 G A 287 -54.825 11.143 -58.840 1.00 15.57 N
ATOM 15 C8 G A 287 -56.054 10.841 -59.379 1.00 15.57 C
ATOM 16 N7 G A 287 -56.126 11.041 -60.665 1.00 15.57 N
ATOM 17 C5 G A 287 -54.878 11.528 -61.011 1.00 15.57 C
ATOM 18 C6 G A 287 -54.370 11.915 -62.268 1.00 15.57 C
ATOM 19 O6 G A 287 -54.931 11.926 -63.367 1.00 15.57 O
ATOM 20 N1 G A 287 -53.065 12.330 -62.167 1.00 15.57 N
ATOM 21 C2 G A 287 -52.353 12.388 -61.010 1.00 15.57 C
ATOM 22 N2 G A 287 -51.101 12.825 -61.104 1.00 15.57 N
ATOM 23 N3 G A 287 -52.802 12.041 -59.841 1.00 15.57 N
ATOM 24 C4 G A 287 -54.068 11.610 -59.903 1.00 15.57 C
ATOM 25 P C A 288 -56.700 14.779 -55.903 1.00 15.40 P
ATOM 26 OP1 C A 288 -57.041 15.474 -54.640 1.00 15.40 O
ATOM 27 OP2 C A 288 -57.581 14.965 -57.093 1.00 15.40 O
ATOM 28 O5' C A 288 -55.190 15.105 -56.294 1.00 15.40 O
TER
ATOM 1 O3' U B 112 -61.788 4.144 -63.791 1.00 17.82 O
ATOM 2 P G B 113 -62.269 5.406 -62.956 1.00 12.51 P
ATOM 3 OP1 G B 113 -63.599 5.048 -62.377 1.00 12.51 O
ATOM 4 OP2 G B 113 -62.165 6.580 -63.861 1.00 12.51 O
ATOM 5 O5' G B 113 -61.181 5.512 -61.799 1.00 12.51 O
ATOM 6 C5' G B 113 -61.055 4.477 -60.839 1.00 12.51 C
ATOM 7 C4' G B 113 -60.065 4.830 -59.764 1.00 12.51 C
ATOM 8 O4' G B 113 -58.768 4.979 -60.384 1.00 12.51 O
ATOM 9 C3' G B 113 -60.377 6.129 -59.043 1.00 12.51 C
ATOM 10 O3' G B 113 -60.393 6.006 -57.576 1.00 12.51 O
ATOM 11 C2' G B 113 -59.333 7.140 -59.562 1.00 12.51 C
ATOM 12 O2' G B 113 -58.828 8.049 -58.595 1.00 12.51 O
ATOM 13 C1' G B 113 -58.226 6.263 -60.158 1.00 12.51 C
ATOM 14 N9 G B 113 -57.724 6.765 -61.451 1.00 12.84 N
ATOM 15 C8 G B 113 -58.401 6.717 -62.648 1.00 12.84 C
ATOM 16 N7 G B 113 -57.751 7.246 -63.652 1.00 12.84 N
ATOM 17 C5 G B 113 -56.567 7.682 -63.086 1.00 12.84 C
ATOM 18 C6 G B 113 -55.466 8.355 -63.675 1.00 12.84 C
ATOM 19 O6 G B 113 -55.306 8.706 -64.851 1.00 12.84 O
ATOM 20 N1 G B 113 -54.460 8.626 -62.768 1.00 12.84 N
ATOM 21 C2 G B 113 -54.532 8.294 -61.453 1.00 12.84 C
ATOM 22 N2 G B 113 -53.469 8.643 -60.738 1.00 12.84 N
ATOM 23 N3 G B 113 -55.546 7.686 -60.867 1.00 12.84 N
ATOM 24 C4 G B 113 -56.530 7.400 -61.742 1.00 12.84 C
ATOM 25 P A B 114 -59.441 5.008 -56.699 1.00 10.60 P
ATOM 26 OP1 A B 114 -59.852 5.190 -55.283 1.00 10.60 O
ATOM 27 OP2 A B 114 -58.022 5.295 -57.073 1.00 10.60 O
ATOM 28 O5' A B 114 -59.856 3.545 -57.194 1.00 10.60 O
TER
ATOM 2 P G A 287 -59.332 8.989 -54.779 1.00 15.54 P
ATOM 3 OP1 G A 287 -60.544 9.129 -55.626 1.00 15.54 O
ATOM 4 OP2 G A 287 -59.247 7.855 -53.849 1.00 15.54 O
ATOM 5 O5' G A 287 -58.019 9.056 -55.681 1.00 15.54 O
ATOM 6 C5' G A 287 -57.736 10.211 -56.460 1.00 15.54 C
ATOM 7 C4' G A 287 -56.398 10.815 -56.107 1.00 15.54 C
ATOM 8 O4' G A 287 -55.344 10.103 -56.816 1.00 15.54 O
ATOM 9 C3' G A 287 -56.194 12.278 -56.514 1.00 15.54 C
ATOM 10 O3' G A 287 -56.681 13.202 -55.567 1.00 15.54 O
ATOM 11 C2' G A 287 -54.698 12.345 -56.692 1.00 15.54 C
ATOM 12 O2' G A 287 -54.045 12.303 -55.430 1.00 15.54 O
ATOM 13 C1' G A 287 -54.466 11.032 -57.407 1.00 15.54 C
ATOM 14 N9 G A 287 -54.825 11.143 -58.840 1.00 15.57 N
ATOM 15 C8 G A 287 -56.054 10.841 -59.379 1.00 15.57 C
ATOM 16 N7 G A 287 -56.126 11.041 -60.665 1.00 15.57 N
ATOM 17 C5 G A 287 -54.878 11.528 -61.011 1.00 15.57 C
ATOM 18 C6 G A 287 -54.370 11.915 -62.268 1.00 15.57 C
ATOM 19 O6 G A 287 -54.931 11.926 -63.367 1.00 15.57 O
ATOM 20 N1 G A 287 -53.065 12.330 -62.167 1.00 15.57 N
ATOM 21 C2 G A 287 -52.353 12.388 -61.010 1.00 15.57 C
ATOM 22 N2 G A 287 -51.101 12.825 -61.104 1.00 15.57 N
ATOM 23 N3 G A 287 -52.802 12.041 -59.841 1.00 15.57 N
ATOM 24 C4 G A 287 -54.068 11.610 -59.903 1.00 15.57 C
ATOM 25 P C A 288 -56.700 14.779 -55.903 1.00 15.40 P
ATOM 26 OP1 C A 288 -57.041 15.474 -54.640 1.00 15.40 O
ATOM 27 OP2 C A 288 -57.581 14.965 -57.093 1.00 15.40 O
ATOM 28 O5' C A 288 -55.190 15.105 -56.294 1.00 15.40 O
TER
ATOM 1 O3' U B 112 -61.788 4.144 -63.791 1.00 17.82 O
ATOM 2 P G B 113 -62.269 5.406 -62.956 1.00 12.51 P
ATOM 3 OP1 G B 113 -63.599 5.048 -62.377 1.00 12.51 O
ATOM 4 OP2 G B 113 -62.165 6.580 -63.861 1.00 12.51 O
ATOM 5 O5' G B 113 -61.181 5.512 -61.799 1.00 12.51 O
ATOM 6 C5' G B 113 -61.055 4.477 -60.839 1.00 12.51 C
ATOM 7 C4' G B 113 -60.065 4.830 -59.764 1.00 12.51 C
ATOM 8 O4' G B 113 -58.768 4.979 -60.384 1.00 12.51 O
ATOM 9 C3' G B 113 -60.377 6.129 -59.043 1.00 12.51 C
ATOM 10 O3' G B 113 -60.393 6.006 -57.576 1.00 12.51 O
ATOM 11 C2' G B 113 -59.333 7.140 -59.562 1.00 12.51 C
ATOM 12 O2' G B 113 -58.828 8.049 -58.595 1.00 12.51 O
ATOM 13 C1' G B 113 -58.226 6.263 -60.158 1.00 12.51 C
ATOM 14 N9 G B 113 -57.724 6.765 -61.451 1.00 12.84 N
ATOM 15 C8 G B 113 -58.401 6.717 -62.648 1.00 12.84 C
ATOM 16 N7 G B 113 -57.751 7.246 -63.652 1.00 12.84 N
ATOM 17 C5 G B 113 -56.567 7.682 -63.086 1.00 12.84 C
ATOM 18 C6 G B 113 -55.466 8.355 -63.675 1.00 12.84 C
ATOM 19 O6 G B 113 -55.306 8.706 -64.851 1.00 12.84 O
ATOM 20 N1 G B 113 -54.460 8.626 -62.768 1.00 12.84 N
ATOM 21 C2 G B 113 -54.532 8.294 -61.453 1.00 12.84 C
ATOM 22 N2 G B 113 -53.469 8.643 -60.738 1.00 12.84 N
ATOM 23 N3 G B 113 -55.546 7.686 -60.867 1.00 12.84 N
ATOM 24 C4 G B 113 -56.530 7.400 -61.742 1.00 12.84 C
ATOM 25 P A B 114 -59.441 5.008 -56.699 1.00 10.60 P
ATOM 26 OP1 A B 114 -59.852 5.190 -55.283 1.00 10.60 O
ATOM 27 OP2 A B 114 -58.022 5.295 -57.073 1.00 10.60 O
ATOM 28 O5' A B 114 -59.856 3.545 -57.194 1.00 10.60 O
TER
Atoms:
OP1: (-60.544,9.129,-55.626)
OP2: (-59.247,7.855,-53.849)
C3': (-56.194,12.278,-56.514)
C1': (-54.466,11.032,-57.407)
C5': (-57.736,10.211,-56.460)
O6: (-54.931,11.926,-63.367)
O4': (-55.344,10.103,-56.816)
C8: (-56.054,10.841,-59.379)
C2: (-52.353,12.388,-61.010)
C6: (-54.370,11.915,-62.268)
C5: (-54.878,11.528,-61.011)
C4: (-54.068,11.610,-59.903)
P: (-59.332,8.989,-54.779)
C4': (-56.398,10.815,-56.107)
C2': (-54.698,12.345,-56.692)
O2': (-54.045,12.303,-55.430)
N1: (-53.065,12.330,-62.167)
N2: (-51.101,12.825,-61.104)
N3: (-52.802,12.041,-59.841)
N7: (-56.126,11.041,-60.665)
N9: (-54.825,11.143,-58.840)
O5': (-58.019,9.056,-55.681)
O3': (-56.681,13.202,-55.567)
OP2: (-59.247,7.855,-53.849)
C3': (-56.194,12.278,-56.514)
C1': (-54.466,11.032,-57.407)
C5': (-57.736,10.211,-56.460)
O6: (-54.931,11.926,-63.367)
O4': (-55.344,10.103,-56.816)
C8: (-56.054,10.841,-59.379)
C2: (-52.353,12.388,-61.010)
C6: (-54.370,11.915,-62.268)
C5: (-54.878,11.528,-61.011)
C4: (-54.068,11.610,-59.903)
P: (-59.332,8.989,-54.779)
C4': (-56.398,10.815,-56.107)
C2': (-54.698,12.345,-56.692)
O2': (-54.045,12.303,-55.430)
N1: (-53.065,12.330,-62.167)
N2: (-51.101,12.825,-61.104)
N3: (-52.802,12.041,-59.841)
N7: (-56.126,11.041,-60.665)
N9: (-54.825,11.143,-58.840)
O5': (-58.019,9.056,-55.681)
O3': (-56.681,13.202,-55.567)
OP1: (-63.599,5.048,-62.377)
OP2: (-62.165,6.580,-63.861)
C3': (-60.377,6.129,-59.043)
C1': (-58.226,6.263,-60.158)
C5': (-61.055,4.477,-60.839)
O6: (-55.306,8.706,-64.851)
O4': (-58.768,4.979,-60.384)
C8: (-58.401,6.717,-62.648)
C2: (-54.532,8.294,-61.453)
C6: (-55.466,8.355,-63.675)
C5: (-56.567,7.682,-63.086)
C4: (-56.530,7.400,-61.742)
P: (-62.269,5.406,-62.956)
C4': (-60.065,4.830,-59.764)
C2': (-59.333,7.140,-59.562)
O2': (-58.828,8.049,-58.595)
N1: (-54.460,8.626,-62.768)
N2: (-53.469,8.643,-60.738)
N3: (-55.546,7.686,-60.867)
N7: (-57.751,7.246,-63.652)
N9: (-57.724,6.765,-61.451)
O5': (-61.181,5.512,-61.799)
O3': (-60.393,6.006,-57.576)
OP2: (-62.165,6.580,-63.861)
C3': (-60.377,6.129,-59.043)
C1': (-58.226,6.263,-60.158)
C5': (-61.055,4.477,-60.839)
O6: (-55.306,8.706,-64.851)
O4': (-58.768,4.979,-60.384)
C8: (-58.401,6.717,-62.648)
C2: (-54.532,8.294,-61.453)
C6: (-55.466,8.355,-63.675)
C5: (-56.567,7.682,-63.086)
C4: (-56.530,7.400,-61.742)
P: (-62.269,5.406,-62.956)
C4': (-60.065,4.830,-59.764)
C2': (-59.333,7.140,-59.562)
O2': (-58.828,8.049,-58.595)
N1: (-54.460,8.626,-62.768)
N2: (-53.469,8.643,-60.738)
N3: (-55.546,7.686,-60.867)
N7: (-57.751,7.246,-63.652)
N9: (-57.724,6.765,-61.451)
O5': (-61.181,5.512,-61.799)
O3': (-60.393,6.006,-57.576)
Image (generated by PyMOL):