ClaRNA

Doublet info:

Details

Nucleotide types: GG
Description: None: None
Program used: None
Has errors: False

Source

PDB id: 3OH5:A1742:A1741

Extra

PDB:
ATOM 1 O3' G A1741 45.267 -10.102 -35.913 1.00 46.50 O
ATOM 2 P G A1742 45.082 -8.492 -35.925 1.00 38.81 P
ATOM 3 OP1 G A1742 43.727 -8.214 -35.372 1.00 44.88 O
ATOM 4 OP2 G A1742 45.408 -8.017 -37.285 1.00 35.33 O
ATOM 5 O5' G A1742 46.186 -7.969 -34.916 1.00 31.57 O
ATOM 6 C5' G A1742 46.311 -8.512 -33.615 1.00 34.96 C
ATOM 7 C4' G A1742 47.760 -8.722 -33.260 1.00 37.32 C
ATOM 8 O4' G A1742 48.336 -9.731 -34.122 1.00 35.91 O
ATOM 9 C3' G A1742 48.657 -7.525 -33.458 1.00 30.01 C
ATOM 10 O3' G A1742 48.588 -6.632 -32.386 1.00 25.51 O
ATOM 11 C2' G A1742 50.036 -8.147 -33.645 1.00 38.16 C
ATOM 12 O2' G A1742 50.649 -8.430 -32.392 1.00 45.52 O
ATOM 13 C1' G A1742 49.701 -9.468 -34.320 1.00 34.25 C
ATOM 14 N9 G A1742 49.984 -9.460 -35.761 1.00 34.89 N
ATOM 15 C8 G A1742 49.119 -9.804 -36.761 1.00 39.62 C
ATOM 16 N7 G A1742 49.663 -9.739 -37.942 1.00 41.46 N
ATOM 17 C5 G A1742 50.970 -9.344 -37.705 1.00 43.24 C
ATOM 18 C6 G A1742 52.048 -9.105 -38.605 1.00 46.95 C
ATOM 19 O6 G A1742 52.082 -9.197 -39.844 1.00 52.82 O
ATOM 20 N1 G A1742 53.202 -8.708 -37.931 1.00 49.02 N
ATOM 21 C2 G A1742 53.328 -8.559 -36.571 1.00 48.27 C
ATOM 22 N2 G A1742 54.542 -8.176 -36.124 1.00 40.26 N
ATOM 23 N3 G A1742 52.326 -8.790 -35.727 1.00 49.29 N
ATOM 24 C4 G A1742 51.189 -9.175 -36.356 1.00 43.55 C
ATOM 25 P U A1743 48.600 -5.062 -32.659 1.00 46.05 P
ATOM 26 OP1 U A1743 48.609 -4.399 -31.325 1.00 38.10 O
ATOM 27 OP2 U A1743 47.490 -4.752 -33.601 1.00 48.76 O
ATOM 28 O5' U A1743 49.990 -4.854 -33.391 1.00 33.72 O
TER

ATOM 1 O3' A B1740 47.208 -14.394 -35.348 1.00 45.49 O
ATOM 2 P G B1741 45.930 -14.785 -34.446 1.00 43.81 P
ATOM 3 OP1 G B1741 46.395 -14.935 -33.061 1.00 37.96 O
ATOM 4 OP2 G B1741 45.275 -15.936 -35.120 1.00 39.98 O
ATOM 5 O5' G B1741 45.018 -13.488 -34.545 1.00 39.18 O
ATOM 6 C5' G B1741 44.187 -13.252 -35.667 1.00 43.84 C
ATOM 7 C4' G B1741 44.871 -12.415 -36.710 1.00 39.27 C
ATOM 8 O4' G B1741 44.517 -12.936 -38.005 1.00 54.86 O
ATOM 9 C3' G B1741 44.478 -10.931 -36.767 1.00 44.14 C
ATOM 10 O3' G B1741 45.267 -10.102 -35.913 1.00 46.50 O
ATOM 11 C2' G B1741 44.670 -10.601 -38.228 1.00 57.56 C
ATOM 12 O2' G B1741 46.051 -10.411 -38.507 1.00 52.43 O
ATOM 13 C1' G B1741 44.223 -11.892 -38.890 1.00 68.03 C
ATOM 14 N9 G B1741 42.779 -11.908 -39.146 1.00154.69 N
ATOM 15 C8 G B1741 41.807 -11.268 -38.437 1.00158.90 C
ATOM 16 N7 G B1741 40.619 -11.491 -38.908 1.00171.31 N
ATOM 17 C5 G B1741 40.830 -12.332 -39.985 1.00182.10 C
ATOM 18 C6 G B1741 39.910 -12.913 -40.886 1.00195.69 C
ATOM 19 O6 G B1741 38.677 -12.793 -40.911 1.00192.27 O
ATOM 20 N1 G B1741 40.565 -13.701 -41.830 1.00198.04 N
ATOM 21 C2 G B1741 41.922 -13.902 -41.896 1.00192.20 C
ATOM 22 N2 G B1741 42.361 -14.698 -42.882 1.00194.77 N
ATOM 23 N3 G B1741 42.785 -13.363 -41.057 1.00183.12 N
ATOM 24 C4 G B1741 42.165 -12.600 -40.143 1.00175.00 C
ATOM 25 P G B1742 45.082 -8.492 -35.925 1.00 38.81 P
ATOM 26 OP1 G B1742 43.727 -8.214 -35.372 1.00 44.88 O
ATOM 27 OP2 G B1742 45.408 -8.017 -37.285 1.00 35.33 O
ATOM 28 O5' G B1742 46.186 -7.969 -34.916 1.00 31.57 O
TER

Atoms:
OP1: (43.727,-8.214,-35.372)
OP2: (45.408,-8.017,-37.285)
C3': (48.657,-7.525,-33.458)
C1': (49.701,-9.468,-34.320)
C5': (46.311,-8.512,-33.615)
O6: (52.082,-9.197,-39.844)
O4': (48.336,-9.731,-34.122)
C8: (49.119,-9.804,-36.761)
C2: (53.328,-8.559,-36.571)
C6: (52.048,-9.105,-38.605)
C5: (50.970,-9.344,-37.705)
C4: (51.189,-9.175,-36.356)
P: (45.082,-8.492,-35.925)
C4': (47.760,-8.722,-33.260)
C2': (50.036,-8.147,-33.645)
O2': (50.649,-8.430,-32.392)
N1: (53.202,-8.708,-37.931)
N2: (54.542,-8.176,-36.124)
N3: (52.326,-8.790,-35.727)
N7: (49.663,-9.739,-37.942)
N9: (49.984,-9.460,-35.761)
O5': (46.186,-7.969,-34.916)
O3': (48.588,-6.632,-32.386)
OP1: (46.395,-14.935,-33.061)
OP2: (45.275,-15.936,-35.120)
C3': (44.478,-10.931,-36.767)
C1': (44.223,-11.892,-38.890)
C5': (44.187,-13.252,-35.667)
O6: (38.677,-12.793,-40.911)
O4': (44.517,-12.936,-38.005)
C8: (41.807,-11.268,-38.437)
C2: (41.922,-13.902,-41.896)
C6: (39.910,-12.913,-40.886)
C5: (40.830,-12.332,-39.985)
C4: (42.165,-12.600,-40.143)
P: (45.930,-14.785,-34.446)
C4': (44.871,-12.415,-36.710)
C2': (44.670,-10.601,-38.228)
O2': (46.051,-10.411,-38.507)
N1: (40.565,-13.701,-41.830)
N2: (42.361,-14.698,-42.882)
N3: (42.785,-13.363,-41.057)
N7: (40.619,-11.491,-38.908)
N9: (42.779,-11.908,-39.146)
O5': (45.018,-13.488,-34.545)
O3': (45.267,-10.102,-35.913)
Image (generated by PyMOL):
PyMOL image
show in jmol