Doublet info:
Details
Nucleotide types:
GG
Description:
None: None
Program used:
None
Has errors:
False
Source
PDB id:
3OHJ:A1334:A1293
Extra
PDB:
ATOM 1 O3' A A1333 7.256 -34.610 -26.844 1.00 52.76 O
ATOM 2 P G A1334 7.863 -35.031 -25.439 1.00 46.70 P
ATOM 3 OP1 G A1334 7.106 -34.315 -24.389 1.00 77.25 O
ATOM 4 OP2 G A1334 9.328 -34.837 -25.525 1.00 83.24 O
ATOM 5 O5' G A1334 7.517 -36.562 -25.407 1.00 45.47 O
ATOM 6 C5' G A1334 8.488 -37.506 -25.060 1.00 50.11 C
ATOM 7 C4' G A1334 8.089 -38.217 -23.820 1.00 50.35 C
ATOM 8 O4' G A1334 6.757 -38.773 -24.011 1.00 61.41 O
ATOM 9 C3' G A1334 8.991 -39.374 -23.429 1.00 47.97 C
ATOM 10 O3' G A1334 9.077 -39.449 -22.001 1.00 45.68 O
ATOM 11 C2' G A1334 8.222 -40.575 -23.970 1.00 53.37 C
ATOM 12 O2' G A1334 8.531 -41.800 -23.347 1.00 65.32 O
ATOM 13 C1' G A1334 6.787 -40.139 -23.699 1.00 59.95 C
ATOM 14 N9 G A1334 5.758 -40.849 -24.478 1.00 59.49 N
ATOM 15 C8 G A1334 5.872 -41.641 -25.592 1.00 59.60 C
ATOM 16 N7 G A1334 4.746 -42.160 -25.983 1.00 58.12 N
ATOM 17 C5 G A1334 3.840 -41.706 -25.046 1.00 61.56 C
ATOM 18 C6 G A1334 2.456 -41.937 -24.921 1.00 65.14 C
ATOM 19 O6 G A1334 1.727 -42.621 -25.638 1.00 70.86 O
ATOM 20 N1 G A1334 1.910 -41.274 -23.836 1.00 65.17 N
ATOM 21 C2 G A1334 2.606 -40.488 -22.968 1.00 65.80 C
ATOM 22 N2 G A1334 1.885 -39.946 -21.980 1.00 62.31 N
ATOM 23 N3 G A1334 3.903 -40.269 -23.067 1.00 70.18 N
ATOM 24 C4 G A1334 4.444 -40.907 -24.119 1.00 60.77 C
ATOM 25 P C A1335 9.851 -38.307 -21.146 1.00 42.40 P
ATOM 26 OP1 C A1335 9.656 -37.005 -21.832 1.00 42.18 O
ATOM 27 OP2 C A1335 11.225 -38.777 -20.921 1.00 55.00 O
ATOM 28 O5' C A1335 9.056 -38.324 -19.773 1.00 52.26 O
TER
ATOM 1 O3' G B1292 10.629 -43.182 -33.408 1.00 32.26 O
ATOM 2 P G B1293 10.968 -43.620 -31.890 1.00 35.43 P
ATOM 3 OP1 G B1293 12.446 -43.861 -31.819 1.00 51.93 O
ATOM 4 OP2 G B1293 10.057 -44.725 -31.527 1.00 45.68 O
ATOM 5 O5' G B1293 10.591 -42.329 -31.057 1.00 30.59 O
ATOM 6 C5' G B1293 11.017 -41.042 -31.464 1.00 31.39 C
ATOM 7 C4' G B1293 10.688 -40.025 -30.414 1.00 40.27 C
ATOM 8 O4' G B1293 9.257 -39.772 -30.449 1.00 46.60 O
ATOM 9 C3' G B1293 10.997 -40.473 -28.986 1.00 37.58 C
ATOM 10 O3' G B1293 11.280 -39.335 -28.179 1.00 39.72 O
ATOM 11 C2' G B1293 9.674 -41.072 -28.546 1.00 38.67 C
ATOM 12 O2' G B1293 9.508 -41.130 -27.148 1.00 42.61 O
ATOM 13 C1' G B1293 8.689 -40.106 -29.197 1.00 42.62 C
ATOM 14 N9 G B1293 7.354 -40.663 -29.410 1.00 41.15 N
ATOM 15 C8 G B1293 6.974 -41.716 -30.194 1.00 49.27 C
ATOM 16 N7 G B1293 5.691 -41.973 -30.138 1.00 56.22 N
ATOM 17 C5 G B1293 5.200 -41.025 -29.256 1.00 51.58 C
ATOM 18 C6 G B1293 3.883 -40.808 -28.799 1.00 53.71 C
ATOM 19 O6 G B1293 2.837 -41.428 -29.088 1.00 57.41 O
ATOM 20 N1 G B1293 3.857 -39.737 -27.920 1.00 52.52 N
ATOM 21 C2 G B1293 4.930 -38.981 -27.537 1.00 54.23 C
ATOM 22 N2 G B1293 4.705 -37.982 -26.673 1.00 57.55 N
ATOM 23 N3 G B1293 6.147 -39.182 -27.958 1.00 55.67 N
ATOM 24 C4 G B1293 6.209 -40.213 -28.807 1.00 50.35 C
ATOM 25 P C B1294 12.726 -39.147 -27.499 1.00 54.85 P
ATOM 26 OP1 C B1294 12.584 -38.079 -26.455 1.00 50.22 O
ATOM 27 OP2 C B1294 13.704 -38.949 -28.590 1.00 51.33 O
ATOM 28 O5' C B1294 12.982 -40.553 -26.803 1.00 44.44 O
TER
ATOM 2 P G A1334 7.863 -35.031 -25.439 1.00 46.70 P
ATOM 3 OP1 G A1334 7.106 -34.315 -24.389 1.00 77.25 O
ATOM 4 OP2 G A1334 9.328 -34.837 -25.525 1.00 83.24 O
ATOM 5 O5' G A1334 7.517 -36.562 -25.407 1.00 45.47 O
ATOM 6 C5' G A1334 8.488 -37.506 -25.060 1.00 50.11 C
ATOM 7 C4' G A1334 8.089 -38.217 -23.820 1.00 50.35 C
ATOM 8 O4' G A1334 6.757 -38.773 -24.011 1.00 61.41 O
ATOM 9 C3' G A1334 8.991 -39.374 -23.429 1.00 47.97 C
ATOM 10 O3' G A1334 9.077 -39.449 -22.001 1.00 45.68 O
ATOM 11 C2' G A1334 8.222 -40.575 -23.970 1.00 53.37 C
ATOM 12 O2' G A1334 8.531 -41.800 -23.347 1.00 65.32 O
ATOM 13 C1' G A1334 6.787 -40.139 -23.699 1.00 59.95 C
ATOM 14 N9 G A1334 5.758 -40.849 -24.478 1.00 59.49 N
ATOM 15 C8 G A1334 5.872 -41.641 -25.592 1.00 59.60 C
ATOM 16 N7 G A1334 4.746 -42.160 -25.983 1.00 58.12 N
ATOM 17 C5 G A1334 3.840 -41.706 -25.046 1.00 61.56 C
ATOM 18 C6 G A1334 2.456 -41.937 -24.921 1.00 65.14 C
ATOM 19 O6 G A1334 1.727 -42.621 -25.638 1.00 70.86 O
ATOM 20 N1 G A1334 1.910 -41.274 -23.836 1.00 65.17 N
ATOM 21 C2 G A1334 2.606 -40.488 -22.968 1.00 65.80 C
ATOM 22 N2 G A1334 1.885 -39.946 -21.980 1.00 62.31 N
ATOM 23 N3 G A1334 3.903 -40.269 -23.067 1.00 70.18 N
ATOM 24 C4 G A1334 4.444 -40.907 -24.119 1.00 60.77 C
ATOM 25 P C A1335 9.851 -38.307 -21.146 1.00 42.40 P
ATOM 26 OP1 C A1335 9.656 -37.005 -21.832 1.00 42.18 O
ATOM 27 OP2 C A1335 11.225 -38.777 -20.921 1.00 55.00 O
ATOM 28 O5' C A1335 9.056 -38.324 -19.773 1.00 52.26 O
TER
ATOM 1 O3' G B1292 10.629 -43.182 -33.408 1.00 32.26 O
ATOM 2 P G B1293 10.968 -43.620 -31.890 1.00 35.43 P
ATOM 3 OP1 G B1293 12.446 -43.861 -31.819 1.00 51.93 O
ATOM 4 OP2 G B1293 10.057 -44.725 -31.527 1.00 45.68 O
ATOM 5 O5' G B1293 10.591 -42.329 -31.057 1.00 30.59 O
ATOM 6 C5' G B1293 11.017 -41.042 -31.464 1.00 31.39 C
ATOM 7 C4' G B1293 10.688 -40.025 -30.414 1.00 40.27 C
ATOM 8 O4' G B1293 9.257 -39.772 -30.449 1.00 46.60 O
ATOM 9 C3' G B1293 10.997 -40.473 -28.986 1.00 37.58 C
ATOM 10 O3' G B1293 11.280 -39.335 -28.179 1.00 39.72 O
ATOM 11 C2' G B1293 9.674 -41.072 -28.546 1.00 38.67 C
ATOM 12 O2' G B1293 9.508 -41.130 -27.148 1.00 42.61 O
ATOM 13 C1' G B1293 8.689 -40.106 -29.197 1.00 42.62 C
ATOM 14 N9 G B1293 7.354 -40.663 -29.410 1.00 41.15 N
ATOM 15 C8 G B1293 6.974 -41.716 -30.194 1.00 49.27 C
ATOM 16 N7 G B1293 5.691 -41.973 -30.138 1.00 56.22 N
ATOM 17 C5 G B1293 5.200 -41.025 -29.256 1.00 51.58 C
ATOM 18 C6 G B1293 3.883 -40.808 -28.799 1.00 53.71 C
ATOM 19 O6 G B1293 2.837 -41.428 -29.088 1.00 57.41 O
ATOM 20 N1 G B1293 3.857 -39.737 -27.920 1.00 52.52 N
ATOM 21 C2 G B1293 4.930 -38.981 -27.537 1.00 54.23 C
ATOM 22 N2 G B1293 4.705 -37.982 -26.673 1.00 57.55 N
ATOM 23 N3 G B1293 6.147 -39.182 -27.958 1.00 55.67 N
ATOM 24 C4 G B1293 6.209 -40.213 -28.807 1.00 50.35 C
ATOM 25 P C B1294 12.726 -39.147 -27.499 1.00 54.85 P
ATOM 26 OP1 C B1294 12.584 -38.079 -26.455 1.00 50.22 O
ATOM 27 OP2 C B1294 13.704 -38.949 -28.590 1.00 51.33 O
ATOM 28 O5' C B1294 12.982 -40.553 -26.803 1.00 44.44 O
TER
Atoms:
OP1: (7.106,-34.315,-24.389)
OP2: (9.328,-34.837,-25.525)
C3': (8.991,-39.374,-23.429)
C1': (6.787,-40.139,-23.699)
C5': (8.488,-37.506,-25.060)
O6: (1.727,-42.621,-25.638)
O4': (6.757,-38.773,-24.011)
C8: (5.872,-41.641,-25.592)
C2: (2.606,-40.488,-22.968)
C6: (2.456,-41.937,-24.921)
C5: (3.840,-41.706,-25.046)
C4: (4.444,-40.907,-24.119)
P: (7.863,-35.031,-25.439)
C4': (8.089,-38.217,-23.820)
C2': (8.222,-40.575,-23.970)
O2': (8.531,-41.800,-23.347)
N1: (1.910,-41.274,-23.836)
N2: (1.885,-39.946,-21.980)
N3: (3.903,-40.269,-23.067)
N7: (4.746,-42.160,-25.983)
N9: (5.758,-40.849,-24.478)
O5': (7.517,-36.562,-25.407)
O3': (9.077,-39.449,-22.001)
OP2: (9.328,-34.837,-25.525)
C3': (8.991,-39.374,-23.429)
C1': (6.787,-40.139,-23.699)
C5': (8.488,-37.506,-25.060)
O6: (1.727,-42.621,-25.638)
O4': (6.757,-38.773,-24.011)
C8: (5.872,-41.641,-25.592)
C2: (2.606,-40.488,-22.968)
C6: (2.456,-41.937,-24.921)
C5: (3.840,-41.706,-25.046)
C4: (4.444,-40.907,-24.119)
P: (7.863,-35.031,-25.439)
C4': (8.089,-38.217,-23.820)
C2': (8.222,-40.575,-23.970)
O2': (8.531,-41.800,-23.347)
N1: (1.910,-41.274,-23.836)
N2: (1.885,-39.946,-21.980)
N3: (3.903,-40.269,-23.067)
N7: (4.746,-42.160,-25.983)
N9: (5.758,-40.849,-24.478)
O5': (7.517,-36.562,-25.407)
O3': (9.077,-39.449,-22.001)
OP1: (12.446,-43.861,-31.819)
OP2: (10.057,-44.725,-31.527)
C3': (10.997,-40.473,-28.986)
C1': (8.689,-40.106,-29.197)
C5': (11.017,-41.042,-31.464)
O6: (2.837,-41.428,-29.088)
O4': (9.257,-39.772,-30.449)
C8: (6.974,-41.716,-30.194)
C2: (4.930,-38.981,-27.537)
C6: (3.883,-40.808,-28.799)
C5: (5.200,-41.025,-29.256)
C4: (6.209,-40.213,-28.807)
P: (10.968,-43.620,-31.890)
C4': (10.688,-40.025,-30.414)
C2': (9.674,-41.072,-28.546)
O2': (9.508,-41.130,-27.148)
N1: (3.857,-39.737,-27.920)
N2: (4.705,-37.982,-26.673)
N3: (6.147,-39.182,-27.958)
N7: (5.691,-41.973,-30.138)
N9: (7.354,-40.663,-29.410)
O5': (10.591,-42.329,-31.057)
O3': (11.280,-39.335,-28.179)
OP2: (10.057,-44.725,-31.527)
C3': (10.997,-40.473,-28.986)
C1': (8.689,-40.106,-29.197)
C5': (11.017,-41.042,-31.464)
O6: (2.837,-41.428,-29.088)
O4': (9.257,-39.772,-30.449)
C8: (6.974,-41.716,-30.194)
C2: (4.930,-38.981,-27.537)
C6: (3.883,-40.808,-28.799)
C5: (5.200,-41.025,-29.256)
C4: (6.209,-40.213,-28.807)
P: (10.968,-43.620,-31.890)
C4': (10.688,-40.025,-30.414)
C2': (9.674,-41.072,-28.546)
O2': (9.508,-41.130,-27.148)
N1: (3.857,-39.737,-27.920)
N2: (4.705,-37.982,-26.673)
N3: (6.147,-39.182,-27.958)
N7: (5.691,-41.973,-30.138)
N9: (7.354,-40.663,-29.410)
O5': (10.591,-42.329,-31.057)
O3': (11.280,-39.335,-28.179)
Image (generated by PyMOL):