Doublet info:
Details
Nucleotide types:
CA
Description:
None: None
Program used:
None
Has errors:
False
Source
PDB id:
1KD1:B112:B64
Extra
PDB:
ATOM 1 O3' U A 111 49.930 34.335 114.052 1.00 62.65 O
ATOM 2 P C A 112 50.393 32.823 114.372 1.00 63.48 P
ATOM 3 OP1 C A 112 50.434 32.048 113.107 1.00 63.14 O
ATOM 4 OP2 C A 112 49.553 32.346 115.486 1.00 63.17 O
ATOM 5 O5' C A 112 51.892 32.942 114.905 1.00 61.98 O
ATOM 6 C5' C A 112 52.946 33.408 114.053 1.00 61.64 C
ATOM 7 C4' C A 112 54.221 32.634 114.307 1.00 62.81 C
ATOM 8 O4' C A 112 54.875 33.090 115.532 1.00 63.78 O
ATOM 9 C3' C A 112 54.083 31.120 114.431 1.00 63.75 C
ATOM 10 O3' C A 112 55.031 30.509 113.555 1.00 64.12 O
ATOM 11 C2' C A 112 54.391 30.884 115.916 1.00 64.11 C
ATOM 12 O2' C A 112 54.896 29.592 116.167 1.00 65.15 O
ATOM 13 C1' C A 112 55.435 31.975 116.180 1.00 63.88 C
ATOM 14 N1 C A 112 55.812 32.348 117.582 1.00 63.78 N
ATOM 15 C2 C A 112 57.046 33.033 117.804 1.00 63.26 C
ATOM 16 O2 C A 112 57.765 33.317 116.833 1.00 62.45 O
ATOM 17 N3 C A 112 57.414 33.352 119.071 1.00 62.02 N
ATOM 18 C4 C A 112 56.632 33.012 120.098 1.00 62.56 C
ATOM 19 N4 C A 112 57.056 33.312 121.324 1.00 62.20 N
ATOM 20 C5 C A 112 55.380 32.339 119.911 1.00 63.40 C
ATOM 21 C6 C A 112 55.012 32.031 118.650 1.00 63.87 C
ATOM 22 P G A 113 54.519 29.712 112.240 1.00 65.42 P
ATOM 23 OP1 G A 113 53.586 28.654 112.676 1.00 65.92 O
ATOM 24 OP2 G A 113 55.688 29.364 111.376 1.00 64.40 O
ATOM 25 O5' G A 113 53.627 30.751 111.446 1.00 63.43 O
TER
ATOM 1 O3' C B 63 53.519 30.420 125.384 1.00 76.08 O
ATOM 2 P A B 64 52.743 31.821 125.234 1.00 77.71 P
ATOM 3 OP1 A B 64 52.321 32.233 126.601 1.00 78.11 O
ATOM 4 OP2 A B 64 51.723 31.723 124.159 1.00 77.40 O
ATOM 5 O5' A B 64 53.884 32.820 124.762 1.00 77.87 O
ATOM 6 C5' A B 64 55.129 32.931 125.478 1.00 80.55 C
ATOM 7 C4' A B 64 55.801 34.222 125.096 1.00 82.37 C
ATOM 8 O4' A B 64 55.960 34.246 123.657 1.00 83.64 O
ATOM 9 C3' A B 64 54.988 35.460 125.438 1.00 82.66 C
ATOM 10 O3' A B 64 55.321 35.811 126.788 1.00 80.88 O
ATOM 11 C2' A B 64 55.328 36.446 124.321 1.00 83.49 C
ATOM 12 O2' A B 64 56.535 37.135 124.530 1.00 86.11 O
ATOM 13 C1' A B 64 55.564 35.504 123.144 1.00 83.97 C
ATOM 14 N9 A B 64 54.463 35.267 122.221 1.00 84.31 N
ATOM 15 C8 A B 64 53.194 34.821 122.481 1.00 85.18 C
ATOM 16 N7 A B 64 52.494 34.568 121.400 1.00 85.02 N
ATOM 17 C5 A B 64 53.352 34.906 120.362 1.00 84.34 C
ATOM 18 C6 A B 64 53.222 34.844 118.965 1.00 84.28 C
ATOM 19 N6 A B 64 52.144 34.368 118.345 1.00 85.06 N
ATOM 20 N1 A B 64 54.259 35.276 118.216 1.00 83.57 N
ATOM 21 C2 A B 64 55.355 35.717 118.838 1.00 83.86 C
ATOM 22 N3 A B 64 55.606 35.801 120.140 1.00 84.47 N
ATOM 23 C4 A B 64 54.551 35.374 120.856 1.00 84.39 C
ATOM 24 P G B 65 55.857 37.285 127.163 1.00 78.90 P
ATOM 25 OP1 G B 65 55.592 37.404 128.613 1.00 80.09 O
ATOM 26 OP2 G B 65 55.335 38.329 126.239 1.00 79.17 O
ATOM 27 O5' G B 65 57.436 37.183 126.997 1.00 76.22 O
TER
ATOM 2 P C A 112 50.393 32.823 114.372 1.00 63.48 P
ATOM 3 OP1 C A 112 50.434 32.048 113.107 1.00 63.14 O
ATOM 4 OP2 C A 112 49.553 32.346 115.486 1.00 63.17 O
ATOM 5 O5' C A 112 51.892 32.942 114.905 1.00 61.98 O
ATOM 6 C5' C A 112 52.946 33.408 114.053 1.00 61.64 C
ATOM 7 C4' C A 112 54.221 32.634 114.307 1.00 62.81 C
ATOM 8 O4' C A 112 54.875 33.090 115.532 1.00 63.78 O
ATOM 9 C3' C A 112 54.083 31.120 114.431 1.00 63.75 C
ATOM 10 O3' C A 112 55.031 30.509 113.555 1.00 64.12 O
ATOM 11 C2' C A 112 54.391 30.884 115.916 1.00 64.11 C
ATOM 12 O2' C A 112 54.896 29.592 116.167 1.00 65.15 O
ATOM 13 C1' C A 112 55.435 31.975 116.180 1.00 63.88 C
ATOM 14 N1 C A 112 55.812 32.348 117.582 1.00 63.78 N
ATOM 15 C2 C A 112 57.046 33.033 117.804 1.00 63.26 C
ATOM 16 O2 C A 112 57.765 33.317 116.833 1.00 62.45 O
ATOM 17 N3 C A 112 57.414 33.352 119.071 1.00 62.02 N
ATOM 18 C4 C A 112 56.632 33.012 120.098 1.00 62.56 C
ATOM 19 N4 C A 112 57.056 33.312 121.324 1.00 62.20 N
ATOM 20 C5 C A 112 55.380 32.339 119.911 1.00 63.40 C
ATOM 21 C6 C A 112 55.012 32.031 118.650 1.00 63.87 C
ATOM 22 P G A 113 54.519 29.712 112.240 1.00 65.42 P
ATOM 23 OP1 G A 113 53.586 28.654 112.676 1.00 65.92 O
ATOM 24 OP2 G A 113 55.688 29.364 111.376 1.00 64.40 O
ATOM 25 O5' G A 113 53.627 30.751 111.446 1.00 63.43 O
TER
ATOM 1 O3' C B 63 53.519 30.420 125.384 1.00 76.08 O
ATOM 2 P A B 64 52.743 31.821 125.234 1.00 77.71 P
ATOM 3 OP1 A B 64 52.321 32.233 126.601 1.00 78.11 O
ATOM 4 OP2 A B 64 51.723 31.723 124.159 1.00 77.40 O
ATOM 5 O5' A B 64 53.884 32.820 124.762 1.00 77.87 O
ATOM 6 C5' A B 64 55.129 32.931 125.478 1.00 80.55 C
ATOM 7 C4' A B 64 55.801 34.222 125.096 1.00 82.37 C
ATOM 8 O4' A B 64 55.960 34.246 123.657 1.00 83.64 O
ATOM 9 C3' A B 64 54.988 35.460 125.438 1.00 82.66 C
ATOM 10 O3' A B 64 55.321 35.811 126.788 1.00 80.88 O
ATOM 11 C2' A B 64 55.328 36.446 124.321 1.00 83.49 C
ATOM 12 O2' A B 64 56.535 37.135 124.530 1.00 86.11 O
ATOM 13 C1' A B 64 55.564 35.504 123.144 1.00 83.97 C
ATOM 14 N9 A B 64 54.463 35.267 122.221 1.00 84.31 N
ATOM 15 C8 A B 64 53.194 34.821 122.481 1.00 85.18 C
ATOM 16 N7 A B 64 52.494 34.568 121.400 1.00 85.02 N
ATOM 17 C5 A B 64 53.352 34.906 120.362 1.00 84.34 C
ATOM 18 C6 A B 64 53.222 34.844 118.965 1.00 84.28 C
ATOM 19 N6 A B 64 52.144 34.368 118.345 1.00 85.06 N
ATOM 20 N1 A B 64 54.259 35.276 118.216 1.00 83.57 N
ATOM 21 C2 A B 64 55.355 35.717 118.838 1.00 83.86 C
ATOM 22 N3 A B 64 55.606 35.801 120.140 1.00 84.47 N
ATOM 23 C4 A B 64 54.551 35.374 120.856 1.00 84.39 C
ATOM 24 P G B 65 55.857 37.285 127.163 1.00 78.90 P
ATOM 25 OP1 G B 65 55.592 37.404 128.613 1.00 80.09 O
ATOM 26 OP2 G B 65 55.335 38.329 126.239 1.00 79.17 O
ATOM 27 O5' G B 65 57.436 37.183 126.997 1.00 76.22 O
TER
Atoms:
C2: (57.046,33.033,117.804)
OP1: (50.434,32.048,113.107)
OP2: (49.553,32.346,115.486)
C4: (56.632,33.012,120.098)
O5': (51.892,32.942,114.905)
C3': (54.083,31.120,114.431)
C1': (55.435,31.975,116.180)
O4': (54.875,33.090,115.532)
C5': (52.946,33.408,114.053)
P: (50.393,32.823,114.372)
O2: (57.765,33.317,116.833)
C4': (54.221,32.634,114.307)
C2': (54.391,30.884,115.916)
O2': (54.896,29.592,116.167)
N1: (55.812,32.348,117.582)
N3: (57.414,33.352,119.071)
N4: (57.056,33.312,121.324)
C6: (55.012,32.031,118.650)
C5: (55.380,32.339,119.911)
O3': (55.031,30.509,113.555)
OP1: (50.434,32.048,113.107)
OP2: (49.553,32.346,115.486)
C4: (56.632,33.012,120.098)
O5': (51.892,32.942,114.905)
C3': (54.083,31.120,114.431)
C1': (55.435,31.975,116.180)
O4': (54.875,33.090,115.532)
C5': (52.946,33.408,114.053)
P: (50.393,32.823,114.372)
O2: (57.765,33.317,116.833)
C4': (54.221,32.634,114.307)
C2': (54.391,30.884,115.916)
O2': (54.896,29.592,116.167)
N1: (55.812,32.348,117.582)
N3: (57.414,33.352,119.071)
N4: (57.056,33.312,121.324)
C6: (55.012,32.031,118.650)
C5: (55.380,32.339,119.911)
O3': (55.031,30.509,113.555)
OP1: (52.321,32.233,126.601)
OP2: (51.723,31.723,124.159)
C3': (54.988,35.460,125.438)
C1': (55.564,35.504,123.144)
C5': (55.129,32.931,125.478)
O4': (55.960,34.246,123.657)
C8: (53.194,34.821,122.481)
O2': (56.535,37.135,124.530)
C6: (53.222,34.844,118.965)
C5: (53.352,34.906,120.362)
C4: (54.551,35.374,120.856)
P: (52.743,31.821,125.234)
C4': (55.801,34.222,125.096)
C2': (55.328,36.446,124.321)
C2: (55.355,35.717,118.838)
N1: (54.259,35.276,118.216)
N3: (55.606,35.801,120.140)
N6: (52.144,34.368,118.345)
N7: (52.494,34.568,121.400)
N9: (54.463,35.267,122.221)
O5': (53.884,32.820,124.762)
O3': (55.321,35.811,126.788)
OP2: (51.723,31.723,124.159)
C3': (54.988,35.460,125.438)
C1': (55.564,35.504,123.144)
C5': (55.129,32.931,125.478)
O4': (55.960,34.246,123.657)
C8: (53.194,34.821,122.481)
O2': (56.535,37.135,124.530)
C6: (53.222,34.844,118.965)
C5: (53.352,34.906,120.362)
C4: (54.551,35.374,120.856)
P: (52.743,31.821,125.234)
C4': (55.801,34.222,125.096)
C2': (55.328,36.446,124.321)
C2: (55.355,35.717,118.838)
N1: (54.259,35.276,118.216)
N3: (55.606,35.801,120.140)
N6: (52.144,34.368,118.345)
N7: (52.494,34.568,121.400)
N9: (54.463,35.267,122.221)
O5': (53.884,32.820,124.762)
O3': (55.321,35.811,126.788)
Image (generated by PyMOL):