Doublet info:
Details
Nucleotide types:
GG
Description:
None: None
Program used:
None
Has errors:
False
Source
PDB id:
3KNI:A1340:A1299
Extra
PDB:
ATOM 1 O3' A A1339 6.543 -34.906 -28.326 1.00 50.31 O
ATOM 2 P G A1340 7.077 -35.247 -26.851 1.00 60.97 P
ATOM 3 OP1 G A1340 6.077 -34.773 -25.840 1.00 53.37 O
ATOM 4 OP2 G A1340 8.481 -34.748 -26.778 1.00 58.86 O
ATOM 5 O5' G A1340 7.105 -36.842 -26.834 1.00 53.86 O
ATOM 6 C5' G A1340 8.130 -37.549 -26.133 1.00 56.55 C
ATOM 7 C4' G A1340 7.539 -38.256 -24.953 1.00 52.72 C
ATOM 8 O4' G A1340 6.296 -38.806 -25.403 1.00 50.20 O
ATOM 9 C3' G A1340 8.322 -39.455 -24.423 1.00 54.46 C
ATOM 10 O3' G A1340 9.388 -39.248 -23.452 1.00 64.48 O
ATOM 11 C2' G A1340 7.270 -40.503 -24.086 1.00 52.99 C
ATOM 12 O2' G A1340 7.242 -40.692 -22.705 1.00 59.95 O
ATOM 13 C1' G A1340 5.955 -39.866 -24.566 1.00 52.19 C
ATOM 14 N9 G A1340 5.034 -40.726 -25.303 1.00 52.32 N
ATOM 15 C8 G A1340 5.343 -41.537 -26.366 1.00 55.96 C
ATOM 16 N7 G A1340 4.310 -42.186 -26.833 1.00 51.70 N
ATOM 17 C5 G A1340 3.254 -41.782 -26.030 1.00 53.00 C
ATOM 18 C6 G A1340 1.890 -42.155 -26.059 1.00 54.77 C
ATOM 19 O6 G A1340 1.322 -42.936 -26.824 1.00 58.69 O
ATOM 20 N1 G A1340 1.162 -41.513 -25.072 1.00 50.16 N
ATOM 21 C2 G A1340 1.674 -40.619 -24.181 1.00 52.49 C
ATOM 22 N2 G A1340 0.791 -40.084 -23.327 1.00 55.83 N
ATOM 23 N3 G A1340 2.950 -40.265 -24.130 1.00 51.47 N
ATOM 24 C4 G A1340 3.679 -40.880 -25.080 1.00 50.00 C
ATOM 25 P C A1341 9.202 -38.360 -22.092 1.00 67.77 P
ATOM 26 OP1 C A1341 8.836 -36.954 -22.417 1.00 57.11 O
ATOM 27 OP2 C A1341 10.439 -38.601 -21.324 1.00 64.33 O
ATOM 28 O5' C A1341 7.986 -38.992 -21.244 1.00 62.37 O
TER
ATOM 1 O3' G B1298 9.804 -43.827 -34.493 1.00 43.17 O
ATOM 2 P G B1299 10.237 -44.026 -32.953 1.00 40.19 P
ATOM 3 OP1 G B1299 11.727 -44.046 -32.975 1.00 40.12 O
ATOM 4 OP2 G B1299 9.492 -45.185 -32.400 1.00 51.12 O
ATOM 5 O5' G B1299 9.739 -42.714 -32.188 1.00 39.73 O
ATOM 6 C5' G B1299 10.436 -41.482 -32.328 1.00 49.58 C
ATOM 7 C4' G B1299 9.966 -40.455 -31.312 1.00 50.74 C
ATOM 8 O4' G B1299 8.588 -40.083 -31.548 1.00 49.68 O
ATOM 9 C3' G B1299 10.082 -40.790 -29.834 1.00 50.49 C
ATOM 10 O3' G B1299 10.550 -39.630 -29.173 1.00 51.69 O
ATOM 11 C2' G B1299 8.648 -41.079 -29.408 1.00 52.58 C
ATOM 12 O2' G B1299 8.389 -40.714 -28.066 1.00 58.85 O
ATOM 13 C1' G B1299 7.847 -40.183 -30.347 1.00 52.18 C
ATOM 14 N9 G B1299 6.577 -40.817 -30.664 1.00 52.62 N
ATOM 15 C8 G B1299 6.356 -41.772 -31.631 1.00 54.12 C
ATOM 16 N7 G B1299 5.120 -42.183 -31.678 1.00 54.48 N
ATOM 17 C5 G B1299 4.481 -41.454 -30.687 1.00 56.46 C
ATOM 18 C6 G B1299 3.128 -41.475 -30.268 1.00 56.48 C
ATOM 19 O6 G B1299 2.197 -42.159 -30.718 1.00 59.82 O
ATOM 20 N1 G B1299 2.904 -40.592 -29.218 1.00 49.11 N
ATOM 21 C2 G B1299 3.864 -39.787 -28.646 1.00 52.46 C
ATOM 22 N2 G B1299 3.449 -39.024 -27.633 1.00 60.46 N
ATOM 23 N3 G B1299 5.137 -39.744 -29.035 1.00 50.43 N
ATOM 24 C4 G B1299 5.370 -40.602 -30.050 1.00 52.33 C
ATOM 25 P C B1300 12.095 -39.538 -28.748 1.00 64.45 P
ATOM 26 OP1 C B1300 12.163 -38.571 -27.619 1.00 53.83 O
ATOM 27 OP2 C B1300 12.903 -39.289 -29.986 1.00 62.03 O
ATOM 28 O5' C B1300 12.409 -40.990 -28.156 1.00 60.55 O
TER
ATOM 2 P G A1340 7.077 -35.247 -26.851 1.00 60.97 P
ATOM 3 OP1 G A1340 6.077 -34.773 -25.840 1.00 53.37 O
ATOM 4 OP2 G A1340 8.481 -34.748 -26.778 1.00 58.86 O
ATOM 5 O5' G A1340 7.105 -36.842 -26.834 1.00 53.86 O
ATOM 6 C5' G A1340 8.130 -37.549 -26.133 1.00 56.55 C
ATOM 7 C4' G A1340 7.539 -38.256 -24.953 1.00 52.72 C
ATOM 8 O4' G A1340 6.296 -38.806 -25.403 1.00 50.20 O
ATOM 9 C3' G A1340 8.322 -39.455 -24.423 1.00 54.46 C
ATOM 10 O3' G A1340 9.388 -39.248 -23.452 1.00 64.48 O
ATOM 11 C2' G A1340 7.270 -40.503 -24.086 1.00 52.99 C
ATOM 12 O2' G A1340 7.242 -40.692 -22.705 1.00 59.95 O
ATOM 13 C1' G A1340 5.955 -39.866 -24.566 1.00 52.19 C
ATOM 14 N9 G A1340 5.034 -40.726 -25.303 1.00 52.32 N
ATOM 15 C8 G A1340 5.343 -41.537 -26.366 1.00 55.96 C
ATOM 16 N7 G A1340 4.310 -42.186 -26.833 1.00 51.70 N
ATOM 17 C5 G A1340 3.254 -41.782 -26.030 1.00 53.00 C
ATOM 18 C6 G A1340 1.890 -42.155 -26.059 1.00 54.77 C
ATOM 19 O6 G A1340 1.322 -42.936 -26.824 1.00 58.69 O
ATOM 20 N1 G A1340 1.162 -41.513 -25.072 1.00 50.16 N
ATOM 21 C2 G A1340 1.674 -40.619 -24.181 1.00 52.49 C
ATOM 22 N2 G A1340 0.791 -40.084 -23.327 1.00 55.83 N
ATOM 23 N3 G A1340 2.950 -40.265 -24.130 1.00 51.47 N
ATOM 24 C4 G A1340 3.679 -40.880 -25.080 1.00 50.00 C
ATOM 25 P C A1341 9.202 -38.360 -22.092 1.00 67.77 P
ATOM 26 OP1 C A1341 8.836 -36.954 -22.417 1.00 57.11 O
ATOM 27 OP2 C A1341 10.439 -38.601 -21.324 1.00 64.33 O
ATOM 28 O5' C A1341 7.986 -38.992 -21.244 1.00 62.37 O
TER
ATOM 1 O3' G B1298 9.804 -43.827 -34.493 1.00 43.17 O
ATOM 2 P G B1299 10.237 -44.026 -32.953 1.00 40.19 P
ATOM 3 OP1 G B1299 11.727 -44.046 -32.975 1.00 40.12 O
ATOM 4 OP2 G B1299 9.492 -45.185 -32.400 1.00 51.12 O
ATOM 5 O5' G B1299 9.739 -42.714 -32.188 1.00 39.73 O
ATOM 6 C5' G B1299 10.436 -41.482 -32.328 1.00 49.58 C
ATOM 7 C4' G B1299 9.966 -40.455 -31.312 1.00 50.74 C
ATOM 8 O4' G B1299 8.588 -40.083 -31.548 1.00 49.68 O
ATOM 9 C3' G B1299 10.082 -40.790 -29.834 1.00 50.49 C
ATOM 10 O3' G B1299 10.550 -39.630 -29.173 1.00 51.69 O
ATOM 11 C2' G B1299 8.648 -41.079 -29.408 1.00 52.58 C
ATOM 12 O2' G B1299 8.389 -40.714 -28.066 1.00 58.85 O
ATOM 13 C1' G B1299 7.847 -40.183 -30.347 1.00 52.18 C
ATOM 14 N9 G B1299 6.577 -40.817 -30.664 1.00 52.62 N
ATOM 15 C8 G B1299 6.356 -41.772 -31.631 1.00 54.12 C
ATOM 16 N7 G B1299 5.120 -42.183 -31.678 1.00 54.48 N
ATOM 17 C5 G B1299 4.481 -41.454 -30.687 1.00 56.46 C
ATOM 18 C6 G B1299 3.128 -41.475 -30.268 1.00 56.48 C
ATOM 19 O6 G B1299 2.197 -42.159 -30.718 1.00 59.82 O
ATOM 20 N1 G B1299 2.904 -40.592 -29.218 1.00 49.11 N
ATOM 21 C2 G B1299 3.864 -39.787 -28.646 1.00 52.46 C
ATOM 22 N2 G B1299 3.449 -39.024 -27.633 1.00 60.46 N
ATOM 23 N3 G B1299 5.137 -39.744 -29.035 1.00 50.43 N
ATOM 24 C4 G B1299 5.370 -40.602 -30.050 1.00 52.33 C
ATOM 25 P C B1300 12.095 -39.538 -28.748 1.00 64.45 P
ATOM 26 OP1 C B1300 12.163 -38.571 -27.619 1.00 53.83 O
ATOM 27 OP2 C B1300 12.903 -39.289 -29.986 1.00 62.03 O
ATOM 28 O5' C B1300 12.409 -40.990 -28.156 1.00 60.55 O
TER
Atoms:
OP1: (6.077,-34.773,-25.840)
OP2: (8.481,-34.748,-26.778)
C3': (8.322,-39.455,-24.423)
C1': (5.955,-39.866,-24.566)
C5': (8.130,-37.549,-26.133)
O6: (1.322,-42.936,-26.824)
O4': (6.296,-38.806,-25.403)
C8: (5.343,-41.537,-26.366)
C2: (1.674,-40.619,-24.181)
C6: (1.890,-42.155,-26.059)
C5: (3.254,-41.782,-26.030)
C4: (3.679,-40.880,-25.080)
P: (7.077,-35.247,-26.851)
C4': (7.539,-38.256,-24.953)
C2': (7.270,-40.503,-24.086)
O2': (7.242,-40.692,-22.705)
N1: (1.162,-41.513,-25.072)
N2: (0.791,-40.084,-23.327)
N3: (2.950,-40.265,-24.130)
N7: (4.310,-42.186,-26.833)
N9: (5.034,-40.726,-25.303)
O5': (7.105,-36.842,-26.834)
O3': (9.388,-39.248,-23.452)
OP2: (8.481,-34.748,-26.778)
C3': (8.322,-39.455,-24.423)
C1': (5.955,-39.866,-24.566)
C5': (8.130,-37.549,-26.133)
O6: (1.322,-42.936,-26.824)
O4': (6.296,-38.806,-25.403)
C8: (5.343,-41.537,-26.366)
C2: (1.674,-40.619,-24.181)
C6: (1.890,-42.155,-26.059)
C5: (3.254,-41.782,-26.030)
C4: (3.679,-40.880,-25.080)
P: (7.077,-35.247,-26.851)
C4': (7.539,-38.256,-24.953)
C2': (7.270,-40.503,-24.086)
O2': (7.242,-40.692,-22.705)
N1: (1.162,-41.513,-25.072)
N2: (0.791,-40.084,-23.327)
N3: (2.950,-40.265,-24.130)
N7: (4.310,-42.186,-26.833)
N9: (5.034,-40.726,-25.303)
O5': (7.105,-36.842,-26.834)
O3': (9.388,-39.248,-23.452)
OP1: (11.727,-44.046,-32.975)
OP2: (9.492,-45.185,-32.400)
C3': (10.082,-40.790,-29.834)
C1': (7.847,-40.183,-30.347)
C5': (10.436,-41.482,-32.328)
O6: (2.197,-42.159,-30.718)
O4': (8.588,-40.083,-31.548)
C8: (6.356,-41.772,-31.631)
C2: (3.864,-39.787,-28.646)
C6: (3.128,-41.475,-30.268)
C5: (4.481,-41.454,-30.687)
C4: (5.370,-40.602,-30.050)
P: (10.237,-44.026,-32.953)
C4': (9.966,-40.455,-31.312)
C2': (8.648,-41.079,-29.408)
O2': (8.389,-40.714,-28.066)
N1: (2.904,-40.592,-29.218)
N2: (3.449,-39.024,-27.633)
N3: (5.137,-39.744,-29.035)
N7: (5.120,-42.183,-31.678)
N9: (6.577,-40.817,-30.664)
O5': (9.739,-42.714,-32.188)
O3': (10.550,-39.630,-29.173)
OP2: (9.492,-45.185,-32.400)
C3': (10.082,-40.790,-29.834)
C1': (7.847,-40.183,-30.347)
C5': (10.436,-41.482,-32.328)
O6: (2.197,-42.159,-30.718)
O4': (8.588,-40.083,-31.548)
C8: (6.356,-41.772,-31.631)
C2: (3.864,-39.787,-28.646)
C6: (3.128,-41.475,-30.268)
C5: (4.481,-41.454,-30.687)
C4: (5.370,-40.602,-30.050)
P: (10.237,-44.026,-32.953)
C4': (9.966,-40.455,-31.312)
C2': (8.648,-41.079,-29.408)
O2': (8.389,-40.714,-28.066)
N1: (2.904,-40.592,-29.218)
N2: (3.449,-39.024,-27.633)
N3: (5.137,-39.744,-29.035)
N7: (5.120,-42.183,-31.678)
N9: (6.577,-40.817,-30.664)
O5': (9.739,-42.714,-32.188)
O3': (10.550,-39.630,-29.173)
Image (generated by PyMOL):