Doublet info:
Details
Nucleotide types:
GG
Description:
None: None
Program used:
None
Has errors:
False
Source
PDB id:
3NDB:M127:M126
Extra
PDB:
ATOM 1 O3' G A 126 -32.566 33.579-129.152 1.00102.36 O
ATOM 2 P G A 127 -33.108 33.979-130.594 1.00100.08 P
ATOM 3 OP1 G A 127 -32.163 34.973-131.160 1.00104.33 O
ATOM 4 OP2 G A 127 -34.522 34.374-130.535 1.00 99.37 O
ATOM 5 O5' G A 127 -33.000 32.536-131.309 1.00 99.97 O
ATOM 6 C5' G A 127 -31.820 31.713-131.222 1.00100.55 C
ATOM 7 C4' G A 127 -30.548 32.402-131.717 1.00102.45 C
ATOM 8 O4' G A 127 -30.093 33.391-130.758 1.00104.12 O
ATOM 9 C3' G A 127 -29.369 31.455-131.867 1.00105.58 C
ATOM 10 O3' G A 127 -29.157 30.985-133.174 1.00106.89 O
ATOM 11 C2' G A 127 -28.126 32.160-131.328 1.00111.36 C
ATOM 12 O2' G A 127 -27.194 32.622-132.286 1.00115.68 O
ATOM 13 C1' G A 127 -28.710 33.262-130.464 1.00112.98 C
ATOM 14 N9 G A 127 -28.633 32.800-129.099 1.00117.42 N
ATOM 15 C8 G A 127 -29.521 33.145-128.127 1.00118.28 C
ATOM 16 N7 G A 127 -29.259 32.583-126.985 1.00127.47 N
ATOM 17 C5 G A 127 -28.134 31.810-127.212 1.00132.28 C
ATOM 18 C6 G A 127 -27.414 30.995-126.310 1.00145.69 C
ATOM 19 O6 G A 127 -27.654 30.784-125.113 1.00156.88 O
ATOM 20 N1 G A 127 -26.327 30.385-126.922 1.00149.15 N
ATOM 21 C2 G A 127 -25.996 30.548-128.242 1.00140.57 C
ATOM 22 N2 G A 127 -24.914 29.871-128.649 1.00146.33 N
ATOM 23 N3 G A 127 -26.667 31.321-129.094 1.00129.66 N
ATOM 24 C4 G A 127 -27.729 31.929-128.516 1.00125.62 C
ATOM 25 P U A 128 -28.832 29.429-133.146 1.00110.11 P
ATOM 26 OP1 U A 128 -29.009 28.827-134.494 1.00112.43 O
ATOM 27 OP2 U A 128 -29.607 28.913-131.992 1.00110.12 O
ATOM 28 O5' U A 128 -27.265 29.368-132.811 1.00116.35 O
TER
ATOM 1 O3' G B 125 -34.408 37.619-125.235 1.00158.08 O
ATOM 2 P G B 126 -34.923 37.405-126.736 1.00109.94 P
ATOM 3 OP1 G B 126 -34.165 38.327-127.613 1.00114.29 O
ATOM 4 OP2 G B 126 -36.403 37.480-126.782 1.00105.76 O
ATOM 5 O5' G B 126 -34.385 35.905-126.959 1.00106.82 O
ATOM 6 C5' G B 126 -32.992 35.566-126.780 1.00110.43 C
ATOM 7 C4' G B 126 -32.837 34.057-126.840 1.00110.32 C
ATOM 8 O4' G B 126 -33.542 33.399-125.754 1.00115.35 O
ATOM 9 C3' G B 126 -33.453 33.422-128.070 1.00103.65 C
ATOM 10 O3' G B 126 -32.566 33.579-129.152 1.00102.36 O
ATOM 11 C2' G B 126 -33.673 31.976-127.620 1.00107.65 C
ATOM 12 O2' G B 126 -32.523 31.147-127.654 1.00111.17 O
ATOM 13 C1' G B 126 -34.144 32.195-126.188 1.00113.79 C
ATOM 14 N9 G B 126 -35.598 32.342-126.036 1.00113.18 N
ATOM 15 C8 G B 126 -36.304 33.525-126.050 1.00109.18 C
ATOM 16 N7 G B 126 -37.591 33.375-125.891 1.00110.74 N
ATOM 17 C5 G B 126 -37.765 32.008-125.755 1.00116.94 C
ATOM 18 C6 G B 126 -38.954 31.268-125.551 1.00124.90 C
ATOM 19 O6 G B 126 -40.113 31.701-125.447 1.00126.69 O
ATOM 20 N1 G B 126 -38.701 29.893-125.458 1.00134.99 N
ATOM 21 C2 G B 126 -37.454 29.301-125.558 1.00135.55 C
ATOM 22 N2 G B 126 -37.415 27.959-125.449 1.00147.89 N
ATOM 23 N3 G B 126 -36.329 29.996-125.754 1.00127.37 N
ATOM 24 C4 G B 126 -36.550 31.345-125.840 1.00118.96 C
ATOM 25 P G B 127 -33.108 33.979-130.594 1.00100.08 P
ATOM 26 OP1 G B 127 -32.163 34.973-131.160 1.00104.33 O
ATOM 27 OP2 G B 127 -34.522 34.374-130.535 1.00 99.37 O
ATOM 28 O5' G B 127 -33.000 32.536-131.309 1.00 99.97 O
TER
ATOM 2 P G A 127 -33.108 33.979-130.594 1.00100.08 P
ATOM 3 OP1 G A 127 -32.163 34.973-131.160 1.00104.33 O
ATOM 4 OP2 G A 127 -34.522 34.374-130.535 1.00 99.37 O
ATOM 5 O5' G A 127 -33.000 32.536-131.309 1.00 99.97 O
ATOM 6 C5' G A 127 -31.820 31.713-131.222 1.00100.55 C
ATOM 7 C4' G A 127 -30.548 32.402-131.717 1.00102.45 C
ATOM 8 O4' G A 127 -30.093 33.391-130.758 1.00104.12 O
ATOM 9 C3' G A 127 -29.369 31.455-131.867 1.00105.58 C
ATOM 10 O3' G A 127 -29.157 30.985-133.174 1.00106.89 O
ATOM 11 C2' G A 127 -28.126 32.160-131.328 1.00111.36 C
ATOM 12 O2' G A 127 -27.194 32.622-132.286 1.00115.68 O
ATOM 13 C1' G A 127 -28.710 33.262-130.464 1.00112.98 C
ATOM 14 N9 G A 127 -28.633 32.800-129.099 1.00117.42 N
ATOM 15 C8 G A 127 -29.521 33.145-128.127 1.00118.28 C
ATOM 16 N7 G A 127 -29.259 32.583-126.985 1.00127.47 N
ATOM 17 C5 G A 127 -28.134 31.810-127.212 1.00132.28 C
ATOM 18 C6 G A 127 -27.414 30.995-126.310 1.00145.69 C
ATOM 19 O6 G A 127 -27.654 30.784-125.113 1.00156.88 O
ATOM 20 N1 G A 127 -26.327 30.385-126.922 1.00149.15 N
ATOM 21 C2 G A 127 -25.996 30.548-128.242 1.00140.57 C
ATOM 22 N2 G A 127 -24.914 29.871-128.649 1.00146.33 N
ATOM 23 N3 G A 127 -26.667 31.321-129.094 1.00129.66 N
ATOM 24 C4 G A 127 -27.729 31.929-128.516 1.00125.62 C
ATOM 25 P U A 128 -28.832 29.429-133.146 1.00110.11 P
ATOM 26 OP1 U A 128 -29.009 28.827-134.494 1.00112.43 O
ATOM 27 OP2 U A 128 -29.607 28.913-131.992 1.00110.12 O
ATOM 28 O5' U A 128 -27.265 29.368-132.811 1.00116.35 O
TER
ATOM 1 O3' G B 125 -34.408 37.619-125.235 1.00158.08 O
ATOM 2 P G B 126 -34.923 37.405-126.736 1.00109.94 P
ATOM 3 OP1 G B 126 -34.165 38.327-127.613 1.00114.29 O
ATOM 4 OP2 G B 126 -36.403 37.480-126.782 1.00105.76 O
ATOM 5 O5' G B 126 -34.385 35.905-126.959 1.00106.82 O
ATOM 6 C5' G B 126 -32.992 35.566-126.780 1.00110.43 C
ATOM 7 C4' G B 126 -32.837 34.057-126.840 1.00110.32 C
ATOM 8 O4' G B 126 -33.542 33.399-125.754 1.00115.35 O
ATOM 9 C3' G B 126 -33.453 33.422-128.070 1.00103.65 C
ATOM 10 O3' G B 126 -32.566 33.579-129.152 1.00102.36 O
ATOM 11 C2' G B 126 -33.673 31.976-127.620 1.00107.65 C
ATOM 12 O2' G B 126 -32.523 31.147-127.654 1.00111.17 O
ATOM 13 C1' G B 126 -34.144 32.195-126.188 1.00113.79 C
ATOM 14 N9 G B 126 -35.598 32.342-126.036 1.00113.18 N
ATOM 15 C8 G B 126 -36.304 33.525-126.050 1.00109.18 C
ATOM 16 N7 G B 126 -37.591 33.375-125.891 1.00110.74 N
ATOM 17 C5 G B 126 -37.765 32.008-125.755 1.00116.94 C
ATOM 18 C6 G B 126 -38.954 31.268-125.551 1.00124.90 C
ATOM 19 O6 G B 126 -40.113 31.701-125.447 1.00126.69 O
ATOM 20 N1 G B 126 -38.701 29.893-125.458 1.00134.99 N
ATOM 21 C2 G B 126 -37.454 29.301-125.558 1.00135.55 C
ATOM 22 N2 G B 126 -37.415 27.959-125.449 1.00147.89 N
ATOM 23 N3 G B 126 -36.329 29.996-125.754 1.00127.37 N
ATOM 24 C4 G B 126 -36.550 31.345-125.840 1.00118.96 C
ATOM 25 P G B 127 -33.108 33.979-130.594 1.00100.08 P
ATOM 26 OP1 G B 127 -32.163 34.973-131.160 1.00104.33 O
ATOM 27 OP2 G B 127 -34.522 34.374-130.535 1.00 99.37 O
ATOM 28 O5' G B 127 -33.000 32.536-131.309 1.00 99.97 O
TER
Atoms:
OP1: (-32.163,34.973,-131.160)
OP2: (-34.522,34.374,-130.535)
C3': (-29.369,31.455,-131.867)
C1': (-28.710,33.262,-130.464)
C5': (-31.820,31.713,-131.222)
O6: (-27.654,30.784,-125.113)
O4': (-30.093,33.391,-130.758)
C8: (-29.521,33.145,-128.127)
C2: (-25.996,30.548,-128.242)
C6: (-27.414,30.995,-126.310)
C5: (-28.134,31.810,-127.212)
C4: (-27.729,31.929,-128.516)
P: (-33.108,33.979,-130.594)
C4': (-30.548,32.402,-131.717)
C2': (-28.126,32.160,-131.328)
O2': (-27.194,32.622,-132.286)
N1: (-26.327,30.385,-126.922)
N2: (-24.914,29.871,-128.649)
N3: (-26.667,31.321,-129.094)
N7: (-29.259,32.583,-126.985)
N9: (-28.633,32.800,-129.099)
O5': (-33.000,32.536,-131.309)
O3': (-29.157,30.985,-133.174)
OP2: (-34.522,34.374,-130.535)
C3': (-29.369,31.455,-131.867)
C1': (-28.710,33.262,-130.464)
C5': (-31.820,31.713,-131.222)
O6: (-27.654,30.784,-125.113)
O4': (-30.093,33.391,-130.758)
C8: (-29.521,33.145,-128.127)
C2: (-25.996,30.548,-128.242)
C6: (-27.414,30.995,-126.310)
C5: (-28.134,31.810,-127.212)
C4: (-27.729,31.929,-128.516)
P: (-33.108,33.979,-130.594)
C4': (-30.548,32.402,-131.717)
C2': (-28.126,32.160,-131.328)
O2': (-27.194,32.622,-132.286)
N1: (-26.327,30.385,-126.922)
N2: (-24.914,29.871,-128.649)
N3: (-26.667,31.321,-129.094)
N7: (-29.259,32.583,-126.985)
N9: (-28.633,32.800,-129.099)
O5': (-33.000,32.536,-131.309)
O3': (-29.157,30.985,-133.174)
OP1: (-34.165,38.327,-127.613)
OP2: (-36.403,37.480,-126.782)
C3': (-33.453,33.422,-128.070)
C1': (-34.144,32.195,-126.188)
C5': (-32.992,35.566,-126.780)
O6: (-40.113,31.701,-125.447)
O4': (-33.542,33.399,-125.754)
C8: (-36.304,33.525,-126.050)
C2: (-37.454,29.301,-125.558)
C6: (-38.954,31.268,-125.551)
C5: (-37.765,32.008,-125.755)
C4: (-36.550,31.345,-125.840)
P: (-34.923,37.405,-126.736)
C4': (-32.837,34.057,-126.840)
C2': (-33.673,31.976,-127.620)
O2': (-32.523,31.147,-127.654)
N1: (-38.701,29.893,-125.458)
N2: (-37.415,27.959,-125.449)
N3: (-36.329,29.996,-125.754)
N7: (-37.591,33.375,-125.891)
N9: (-35.598,32.342,-126.036)
O5': (-34.385,35.905,-126.959)
O3': (-32.566,33.579,-129.152)
OP2: (-36.403,37.480,-126.782)
C3': (-33.453,33.422,-128.070)
C1': (-34.144,32.195,-126.188)
C5': (-32.992,35.566,-126.780)
O6: (-40.113,31.701,-125.447)
O4': (-33.542,33.399,-125.754)
C8: (-36.304,33.525,-126.050)
C2: (-37.454,29.301,-125.558)
C6: (-38.954,31.268,-125.551)
C5: (-37.765,32.008,-125.755)
C4: (-36.550,31.345,-125.840)
P: (-34.923,37.405,-126.736)
C4': (-32.837,34.057,-126.840)
C2': (-33.673,31.976,-127.620)
O2': (-32.523,31.147,-127.654)
N1: (-38.701,29.893,-125.458)
N2: (-37.415,27.959,-125.449)
N3: (-36.329,29.996,-125.754)
N7: (-37.591,33.375,-125.891)
N9: (-35.598,32.342,-126.036)
O5': (-34.385,35.905,-126.959)
O3': (-32.566,33.579,-129.152)
Image (generated by PyMOL):