Doublet info:
Details
Nucleotide types:
GG
Description:
None: None
Program used:
None
Has errors:
False
Source
PDB id:
3SKZ:A12:A11
Extra
PDB:
ATOM 1 O3' G A 11 3.603 -3.276 -43.718 1.00 45.51 O
ATOM 2 P G A 12 2.551 -3.550 -42.537 1.00 57.33 P
ATOM 3 OP1 G A 12 1.294 -2.873 -42.923 1.00 55.79 O
ATOM 4 OP2 G A 12 3.205 -3.164 -41.267 1.00 62.65 O
ATOM 5 O5' G A 12 2.366 -5.129 -42.587 1.00 33.97 O
ATOM 6 C5' G A 12 1.117 -5.697 -42.939 1.00 41.07 C
ATOM 7 C4' G A 12 1.287 -7.054 -43.560 1.00 38.98 C
ATOM 8 O4' G A 12 1.931 -6.926 -44.849 1.00 38.60 O
ATOM 9 C3' G A 12 2.181 -8.002 -42.806 1.00 34.98 C
ATOM 10 O3' G A 12 1.534 -8.599 -41.706 1.00 26.24 O
ATOM 11 C2' G A 12 2.607 -8.978 -43.892 1.00 34.81 C
ATOM 12 O2' G A 12 1.547 -9.869 -44.201 1.00 31.99 O
ATOM 13 C1' G A 12 2.783 -8.027 -45.068 1.00 37.80 C
ATOM 14 N9 G A 12 4.171 -7.526 -45.188 1.00 40.64 N
ATOM 15 C8 G A 12 4.620 -6.230 -45.051 1.00 35.96 C
ATOM 16 N7 G A 12 5.916 -6.106 -45.251 1.00 30.89 N
ATOM 17 C5 G A 12 6.340 -7.394 -45.542 1.00 26.26 C
ATOM 18 C6 G A 12 7.626 -7.898 -45.834 1.00 26.83 C
ATOM 19 O6 G A 12 8.690 -7.272 -45.905 1.00 32.91 O
ATOM 20 N1 G A 12 7.606 -9.273 -46.057 1.00 25.06 N
ATOM 21 C2 G A 12 6.490 -10.069 -46.022 1.00 25.33 C
ATOM 22 N2 G A 12 6.644 -11.378 -46.273 1.00 25.71 N
ATOM 23 N3 G A 12 5.291 -9.609 -45.757 1.00 29.75 N
ATOM 24 C4 G A 12 5.283 -8.277 -45.522 1.00 34.98 C
ATOM 25 P G A 13 2.313 -8.753 -40.313 1.00 46.65 P
ATOM 26 OP1 G A 13 1.307 -9.154 -39.301 1.00 47.14 O
ATOM 27 OP2 G A 13 3.088 -7.505 -40.098 1.00 31.33 O
ATOM 28 O5' G A 13 3.296 -9.965 -40.600 1.00 36.00 O
TER
ATOM 1 O3' A B 10 0.800 -1.920 -47.146 1.00 34.09 O
ATOM 2 P G B 11 1.225 -0.515 -47.805 1.00 36.27 P
ATOM 3 OP1 G B 11 0.285 0.508 -47.301 1.00 34.43 O
ATOM 4 OP2 G B 11 1.338 -0.726 -49.263 1.00 46.93 O
ATOM 5 O5' G B 11 2.666 -0.255 -47.194 1.00 53.94 O
ATOM 6 C5' G B 11 2.911 -0.396 -45.803 1.00 36.55 C
ATOM 7 C4' G B 11 3.718 -1.635 -45.515 1.00 41.92 C
ATOM 8 O4' G B 11 5.027 -1.506 -46.126 1.00 41.90 O
ATOM 9 C3' G B 11 3.958 -1.933 -44.024 1.00 44.76 C
ATOM 10 O3' G B 11 3.603 -3.276 -43.718 1.00 45.51 O
ATOM 11 C2' G B 11 5.464 -1.761 -43.839 1.00 39.00 C
ATOM 12 O2' G B 11 6.033 -2.670 -42.927 1.00 47.82 O
ATOM 13 C1' G B 11 6.003 -1.998 -45.230 1.00 40.04 C
ATOM 14 N9 G B 11 7.274 -1.323 -45.481 1.00 37.51 N
ATOM 15 C8 G B 11 7.551 0.023 -45.437 1.00 37.94 C
ATOM 16 N7 G B 11 8.809 0.279 -45.678 1.00 40.47 N
ATOM 17 C5 G B 11 9.381 -0.976 -45.883 1.00 43.16 C
ATOM 18 C6 G B 11 10.711 -1.340 -46.198 1.00 44.91 C
ATOM 19 O6 G B 11 11.666 -0.577 -46.355 1.00 46.60 O
ATOM 20 N1 G B 11 10.866 -2.719 -46.321 1.00 39.68 N
ATOM 21 C2 G B 11 9.857 -3.633 -46.157 1.00 41.57 C
ATOM 22 N2 G B 11 10.189 -4.919 -46.307 1.00 43.48 N
ATOM 23 N3 G B 11 8.612 -3.315 -45.858 1.00 38.25 N
ATOM 24 C4 G B 11 8.451 -1.978 -45.745 1.00 38.51 C
ATOM 25 P G B 12 2.551 -3.550 -42.537 1.00 57.33 P
ATOM 26 OP1 G B 12 1.294 -2.873 -42.923 1.00 55.79 O
ATOM 27 OP2 G B 12 3.205 -3.164 -41.267 1.00 62.65 O
ATOM 28 O5' G B 12 2.366 -5.129 -42.587 1.00 33.97 O
TER
ATOM 2 P G A 12 2.551 -3.550 -42.537 1.00 57.33 P
ATOM 3 OP1 G A 12 1.294 -2.873 -42.923 1.00 55.79 O
ATOM 4 OP2 G A 12 3.205 -3.164 -41.267 1.00 62.65 O
ATOM 5 O5' G A 12 2.366 -5.129 -42.587 1.00 33.97 O
ATOM 6 C5' G A 12 1.117 -5.697 -42.939 1.00 41.07 C
ATOM 7 C4' G A 12 1.287 -7.054 -43.560 1.00 38.98 C
ATOM 8 O4' G A 12 1.931 -6.926 -44.849 1.00 38.60 O
ATOM 9 C3' G A 12 2.181 -8.002 -42.806 1.00 34.98 C
ATOM 10 O3' G A 12 1.534 -8.599 -41.706 1.00 26.24 O
ATOM 11 C2' G A 12 2.607 -8.978 -43.892 1.00 34.81 C
ATOM 12 O2' G A 12 1.547 -9.869 -44.201 1.00 31.99 O
ATOM 13 C1' G A 12 2.783 -8.027 -45.068 1.00 37.80 C
ATOM 14 N9 G A 12 4.171 -7.526 -45.188 1.00 40.64 N
ATOM 15 C8 G A 12 4.620 -6.230 -45.051 1.00 35.96 C
ATOM 16 N7 G A 12 5.916 -6.106 -45.251 1.00 30.89 N
ATOM 17 C5 G A 12 6.340 -7.394 -45.542 1.00 26.26 C
ATOM 18 C6 G A 12 7.626 -7.898 -45.834 1.00 26.83 C
ATOM 19 O6 G A 12 8.690 -7.272 -45.905 1.00 32.91 O
ATOM 20 N1 G A 12 7.606 -9.273 -46.057 1.00 25.06 N
ATOM 21 C2 G A 12 6.490 -10.069 -46.022 1.00 25.33 C
ATOM 22 N2 G A 12 6.644 -11.378 -46.273 1.00 25.71 N
ATOM 23 N3 G A 12 5.291 -9.609 -45.757 1.00 29.75 N
ATOM 24 C4 G A 12 5.283 -8.277 -45.522 1.00 34.98 C
ATOM 25 P G A 13 2.313 -8.753 -40.313 1.00 46.65 P
ATOM 26 OP1 G A 13 1.307 -9.154 -39.301 1.00 47.14 O
ATOM 27 OP2 G A 13 3.088 -7.505 -40.098 1.00 31.33 O
ATOM 28 O5' G A 13 3.296 -9.965 -40.600 1.00 36.00 O
TER
ATOM 1 O3' A B 10 0.800 -1.920 -47.146 1.00 34.09 O
ATOM 2 P G B 11 1.225 -0.515 -47.805 1.00 36.27 P
ATOM 3 OP1 G B 11 0.285 0.508 -47.301 1.00 34.43 O
ATOM 4 OP2 G B 11 1.338 -0.726 -49.263 1.00 46.93 O
ATOM 5 O5' G B 11 2.666 -0.255 -47.194 1.00 53.94 O
ATOM 6 C5' G B 11 2.911 -0.396 -45.803 1.00 36.55 C
ATOM 7 C4' G B 11 3.718 -1.635 -45.515 1.00 41.92 C
ATOM 8 O4' G B 11 5.027 -1.506 -46.126 1.00 41.90 O
ATOM 9 C3' G B 11 3.958 -1.933 -44.024 1.00 44.76 C
ATOM 10 O3' G B 11 3.603 -3.276 -43.718 1.00 45.51 O
ATOM 11 C2' G B 11 5.464 -1.761 -43.839 1.00 39.00 C
ATOM 12 O2' G B 11 6.033 -2.670 -42.927 1.00 47.82 O
ATOM 13 C1' G B 11 6.003 -1.998 -45.230 1.00 40.04 C
ATOM 14 N9 G B 11 7.274 -1.323 -45.481 1.00 37.51 N
ATOM 15 C8 G B 11 7.551 0.023 -45.437 1.00 37.94 C
ATOM 16 N7 G B 11 8.809 0.279 -45.678 1.00 40.47 N
ATOM 17 C5 G B 11 9.381 -0.976 -45.883 1.00 43.16 C
ATOM 18 C6 G B 11 10.711 -1.340 -46.198 1.00 44.91 C
ATOM 19 O6 G B 11 11.666 -0.577 -46.355 1.00 46.60 O
ATOM 20 N1 G B 11 10.866 -2.719 -46.321 1.00 39.68 N
ATOM 21 C2 G B 11 9.857 -3.633 -46.157 1.00 41.57 C
ATOM 22 N2 G B 11 10.189 -4.919 -46.307 1.00 43.48 N
ATOM 23 N3 G B 11 8.612 -3.315 -45.858 1.00 38.25 N
ATOM 24 C4 G B 11 8.451 -1.978 -45.745 1.00 38.51 C
ATOM 25 P G B 12 2.551 -3.550 -42.537 1.00 57.33 P
ATOM 26 OP1 G B 12 1.294 -2.873 -42.923 1.00 55.79 O
ATOM 27 OP2 G B 12 3.205 -3.164 -41.267 1.00 62.65 O
ATOM 28 O5' G B 12 2.366 -5.129 -42.587 1.00 33.97 O
TER
Atoms:
OP1: (1.294,-2.873,-42.923)
OP2: (3.205,-3.164,-41.267)
C3': (2.181,-8.002,-42.806)
C1': (2.783,-8.027,-45.068)
C5': (1.117,-5.697,-42.939)
O6: (8.690,-7.272,-45.905)
O4': (1.931,-6.926,-44.849)
C8: (4.620,-6.230,-45.051)
C2: (6.490,-10.069,-46.022)
C6: (7.626,-7.898,-45.834)
C5: (6.340,-7.394,-45.542)
C4: (5.283,-8.277,-45.522)
P: (2.551,-3.550,-42.537)
C4': (1.287,-7.054,-43.560)
C2': (2.607,-8.978,-43.892)
O2': (1.547,-9.869,-44.201)
N1: (7.606,-9.273,-46.057)
N2: (6.644,-11.378,-46.273)
N3: (5.291,-9.609,-45.757)
N7: (5.916,-6.106,-45.251)
N9: (4.171,-7.526,-45.188)
O5': (2.366,-5.129,-42.587)
O3': (1.534,-8.599,-41.706)
OP2: (3.205,-3.164,-41.267)
C3': (2.181,-8.002,-42.806)
C1': (2.783,-8.027,-45.068)
C5': (1.117,-5.697,-42.939)
O6: (8.690,-7.272,-45.905)
O4': (1.931,-6.926,-44.849)
C8: (4.620,-6.230,-45.051)
C2: (6.490,-10.069,-46.022)
C6: (7.626,-7.898,-45.834)
C5: (6.340,-7.394,-45.542)
C4: (5.283,-8.277,-45.522)
P: (2.551,-3.550,-42.537)
C4': (1.287,-7.054,-43.560)
C2': (2.607,-8.978,-43.892)
O2': (1.547,-9.869,-44.201)
N1: (7.606,-9.273,-46.057)
N2: (6.644,-11.378,-46.273)
N3: (5.291,-9.609,-45.757)
N7: (5.916,-6.106,-45.251)
N9: (4.171,-7.526,-45.188)
O5': (2.366,-5.129,-42.587)
O3': (1.534,-8.599,-41.706)
OP1: (0.285,0.508,-47.301)
OP2: (1.338,-0.726,-49.263)
C3': (3.958,-1.933,-44.024)
C1': (6.003,-1.998,-45.230)
C5': (2.911,-0.396,-45.803)
O6: (11.666,-0.577,-46.355)
O4': (5.027,-1.506,-46.126)
C8: (7.551,0.023,-45.437)
C2: (9.857,-3.633,-46.157)
C6: (10.711,-1.340,-46.198)
C5: (9.381,-0.976,-45.883)
C4: (8.451,-1.978,-45.745)
P: (1.225,-0.515,-47.805)
C4': (3.718,-1.635,-45.515)
C2': (5.464,-1.761,-43.839)
O2': (6.033,-2.670,-42.927)
N1: (10.866,-2.719,-46.321)
N2: (10.189,-4.919,-46.307)
N3: (8.612,-3.315,-45.858)
N7: (8.809,0.279,-45.678)
N9: (7.274,-1.323,-45.481)
O5': (2.666,-0.255,-47.194)
O3': (3.603,-3.276,-43.718)
OP2: (1.338,-0.726,-49.263)
C3': (3.958,-1.933,-44.024)
C1': (6.003,-1.998,-45.230)
C5': (2.911,-0.396,-45.803)
O6: (11.666,-0.577,-46.355)
O4': (5.027,-1.506,-46.126)
C8: (7.551,0.023,-45.437)
C2: (9.857,-3.633,-46.157)
C6: (10.711,-1.340,-46.198)
C5: (9.381,-0.976,-45.883)
C4: (8.451,-1.978,-45.745)
P: (1.225,-0.515,-47.805)
C4': (3.718,-1.635,-45.515)
C2': (5.464,-1.761,-43.839)
O2': (6.033,-2.670,-42.927)
N1: (10.866,-2.719,-46.321)
N2: (10.189,-4.919,-46.307)
N3: (8.612,-3.315,-45.858)
N7: (8.809,0.279,-45.678)
N9: (7.274,-1.323,-45.481)
O5': (2.666,-0.255,-47.194)
O3': (3.603,-3.276,-43.718)
Image (generated by PyMOL):