Doublet info:
Details
Nucleotide types:
GG
Description:
None: None
Program used:
None
Has errors:
False
Source
PDB id:
3KNH:X4:X3
Extra
PDB:
ATOM 1 O3' G A 3 109.466 -26.584 -17.841 1.00 95.64 O
ATOM 2 P G A 4 110.935 -25.946 -17.999 1.00 96.34 P
ATOM 3 OP1 G A 4 111.073 -25.552 -19.431 1.00 94.95 O
ATOM 4 OP2 G A 4 111.916 -26.904 -17.403 1.00 95.86 O
ATOM 5 O5' G A 4 110.882 -24.637 -17.073 1.00 94.46 O
ATOM 6 C5' G A 4 110.180 -23.456 -17.496 1.00 91.53 C
ATOM 7 C4' G A 4 110.127 -22.424 -16.384 1.00 88.97 C
ATOM 8 O4' G A 4 109.426 -22.980 -15.242 1.00 88.21 O
ATOM 9 C3' G A 4 111.458 -21.957 -15.818 1.00 88.08 C
ATOM 10 O3' G A 4 112.044 -20.921 -16.595 1.00 88.86 O
ATOM 11 C2' G A 4 111.079 -21.492 -14.422 1.00 86.81 C
ATOM 12 O2' G A 4 110.516 -20.201 -14.428 1.00 85.50 O
ATOM 13 C1' G A 4 110.011 -22.513 -14.040 1.00 87.25 C
ATOM 14 N9 G A 4 110.612 -23.660 -13.368 1.00 88.45 N
ATOM 15 C8 G A 4 110.799 -24.918 -13.894 1.00 88.00 C
ATOM 16 N7 G A 4 111.416 -25.728 -13.079 1.00 89.21 N
ATOM 17 C5 G A 4 111.645 -24.964 -11.938 1.00 90.07 C
ATOM 18 C6 G A 4 112.299 -25.300 -10.707 1.00 90.83 C
ATOM 19 O6 G A 4 112.844 -26.365 -10.385 1.00 92.12 O
ATOM 20 N1 G A 4 112.293 -24.232 -9.815 1.00 90.10 N
ATOM 21 C2 G A 4 111.755 -22.998 -10.072 1.00 90.23 C
ATOM 22 N2 G A 4 111.869 -22.102 -9.094 1.00 90.57 N
ATOM 23 N3 G A 4 111.156 -22.665 -11.209 1.00 89.85 N
ATOM 24 C4 G A 4 111.138 -23.690 -12.092 1.00 89.47 C
ATOM 25 P G A 5 113.650 -20.755 -16.618 1.00 89.45 P
ATOM 26 OP1 G A 5 114.003 -19.920 -17.796 1.00 90.18 O
ATOM 27 OP2 G A 5 114.291 -22.087 -16.454 1.00 89.23 O
ATOM 28 O5' G A 5 113.960 -19.948 -15.281 1.00 88.46 O
TER
ATOM 1 O3' C B 2 108.834 -32.565 -17.543 1.00100.33 O
ATOM 2 P G B 3 110.054 -31.518 -17.551 1.00100.02 P
ATOM 3 OP1 G B 3 110.442 -31.232 -18.961 1.00 99.71 O
ATOM 4 OP2 G B 3 111.067 -32.063 -16.607 1.00 99.59 O
ATOM 5 O5' G B 3 109.416 -30.200 -16.914 1.00 98.59 O
ATOM 6 C5' G B 3 108.280 -29.582 -17.521 1.00 96.35 C
ATOM 7 C4' G B 3 107.976 -28.246 -16.877 1.00 94.80 C
ATOM 8 O4' G B 3 107.426 -28.430 -15.551 1.00 95.33 O
ATOM 9 C3' G B 3 109.138 -27.293 -16.658 1.00 94.41 C
ATOM 10 O3' G B 3 109.466 -26.584 -17.841 1.00 95.64 O
ATOM 11 C2' G B 3 108.607 -26.354 -15.581 1.00 93.45 C
ATOM 12 O2' G B 3 107.828 -25.306 -16.114 1.00 92.76 O
ATOM 13 C1' G B 3 107.695 -27.276 -14.774 1.00 94.07 C
ATOM 14 N9 G B 3 108.237 -27.666 -13.476 1.00 93.99 N
ATOM 15 C8 G B 3 108.662 -28.910 -13.068 1.00 93.71 C
ATOM 16 N7 G B 3 109.072 -28.927 -11.827 1.00 94.03 N
ATOM 17 C5 G B 3 108.916 -27.614 -11.395 1.00 93.92 C
ATOM 18 C6 G B 3 109.185 -27.007 -10.122 1.00 93.56 C
ATOM 19 O6 G B 3 109.632 -27.530 -9.090 1.00 93.28 O
ATOM 20 N1 G B 3 108.870 -25.652 -10.128 1.00 92.51 N
ATOM 21 C2 G B 3 108.360 -24.967 -11.203 1.00 92.37 C
ATOM 22 N2 G B 3 108.114 -23.670 -11.015 1.00 91.65 N
ATOM 23 N3 G B 3 108.106 -25.513 -12.380 1.00 93.02 N
ATOM 24 C4 G B 3 108.406 -26.826 -12.404 1.00 93.57 C
ATOM 25 P G B 4 110.935 -25.946 -17.999 1.00 96.34 P
ATOM 26 OP1 G B 4 111.073 -25.552 -19.431 1.00 94.95 O
ATOM 27 OP2 G B 4 111.916 -26.904 -17.403 1.00 95.86 O
ATOM 28 O5' G B 4 110.882 -24.637 -17.073 1.00 94.46 O
TER
ATOM 2 P G A 4 110.935 -25.946 -17.999 1.00 96.34 P
ATOM 3 OP1 G A 4 111.073 -25.552 -19.431 1.00 94.95 O
ATOM 4 OP2 G A 4 111.916 -26.904 -17.403 1.00 95.86 O
ATOM 5 O5' G A 4 110.882 -24.637 -17.073 1.00 94.46 O
ATOM 6 C5' G A 4 110.180 -23.456 -17.496 1.00 91.53 C
ATOM 7 C4' G A 4 110.127 -22.424 -16.384 1.00 88.97 C
ATOM 8 O4' G A 4 109.426 -22.980 -15.242 1.00 88.21 O
ATOM 9 C3' G A 4 111.458 -21.957 -15.818 1.00 88.08 C
ATOM 10 O3' G A 4 112.044 -20.921 -16.595 1.00 88.86 O
ATOM 11 C2' G A 4 111.079 -21.492 -14.422 1.00 86.81 C
ATOM 12 O2' G A 4 110.516 -20.201 -14.428 1.00 85.50 O
ATOM 13 C1' G A 4 110.011 -22.513 -14.040 1.00 87.25 C
ATOM 14 N9 G A 4 110.612 -23.660 -13.368 1.00 88.45 N
ATOM 15 C8 G A 4 110.799 -24.918 -13.894 1.00 88.00 C
ATOM 16 N7 G A 4 111.416 -25.728 -13.079 1.00 89.21 N
ATOM 17 C5 G A 4 111.645 -24.964 -11.938 1.00 90.07 C
ATOM 18 C6 G A 4 112.299 -25.300 -10.707 1.00 90.83 C
ATOM 19 O6 G A 4 112.844 -26.365 -10.385 1.00 92.12 O
ATOM 20 N1 G A 4 112.293 -24.232 -9.815 1.00 90.10 N
ATOM 21 C2 G A 4 111.755 -22.998 -10.072 1.00 90.23 C
ATOM 22 N2 G A 4 111.869 -22.102 -9.094 1.00 90.57 N
ATOM 23 N3 G A 4 111.156 -22.665 -11.209 1.00 89.85 N
ATOM 24 C4 G A 4 111.138 -23.690 -12.092 1.00 89.47 C
ATOM 25 P G A 5 113.650 -20.755 -16.618 1.00 89.45 P
ATOM 26 OP1 G A 5 114.003 -19.920 -17.796 1.00 90.18 O
ATOM 27 OP2 G A 5 114.291 -22.087 -16.454 1.00 89.23 O
ATOM 28 O5' G A 5 113.960 -19.948 -15.281 1.00 88.46 O
TER
ATOM 1 O3' C B 2 108.834 -32.565 -17.543 1.00100.33 O
ATOM 2 P G B 3 110.054 -31.518 -17.551 1.00100.02 P
ATOM 3 OP1 G B 3 110.442 -31.232 -18.961 1.00 99.71 O
ATOM 4 OP2 G B 3 111.067 -32.063 -16.607 1.00 99.59 O
ATOM 5 O5' G B 3 109.416 -30.200 -16.914 1.00 98.59 O
ATOM 6 C5' G B 3 108.280 -29.582 -17.521 1.00 96.35 C
ATOM 7 C4' G B 3 107.976 -28.246 -16.877 1.00 94.80 C
ATOM 8 O4' G B 3 107.426 -28.430 -15.551 1.00 95.33 O
ATOM 9 C3' G B 3 109.138 -27.293 -16.658 1.00 94.41 C
ATOM 10 O3' G B 3 109.466 -26.584 -17.841 1.00 95.64 O
ATOM 11 C2' G B 3 108.607 -26.354 -15.581 1.00 93.45 C
ATOM 12 O2' G B 3 107.828 -25.306 -16.114 1.00 92.76 O
ATOM 13 C1' G B 3 107.695 -27.276 -14.774 1.00 94.07 C
ATOM 14 N9 G B 3 108.237 -27.666 -13.476 1.00 93.99 N
ATOM 15 C8 G B 3 108.662 -28.910 -13.068 1.00 93.71 C
ATOM 16 N7 G B 3 109.072 -28.927 -11.827 1.00 94.03 N
ATOM 17 C5 G B 3 108.916 -27.614 -11.395 1.00 93.92 C
ATOM 18 C6 G B 3 109.185 -27.007 -10.122 1.00 93.56 C
ATOM 19 O6 G B 3 109.632 -27.530 -9.090 1.00 93.28 O
ATOM 20 N1 G B 3 108.870 -25.652 -10.128 1.00 92.51 N
ATOM 21 C2 G B 3 108.360 -24.967 -11.203 1.00 92.37 C
ATOM 22 N2 G B 3 108.114 -23.670 -11.015 1.00 91.65 N
ATOM 23 N3 G B 3 108.106 -25.513 -12.380 1.00 93.02 N
ATOM 24 C4 G B 3 108.406 -26.826 -12.404 1.00 93.57 C
ATOM 25 P G B 4 110.935 -25.946 -17.999 1.00 96.34 P
ATOM 26 OP1 G B 4 111.073 -25.552 -19.431 1.00 94.95 O
ATOM 27 OP2 G B 4 111.916 -26.904 -17.403 1.00 95.86 O
ATOM 28 O5' G B 4 110.882 -24.637 -17.073 1.00 94.46 O
TER
Atoms:
OP1: (111.073,-25.552,-19.431)
OP2: (111.916,-26.904,-17.403)
C3': (111.458,-21.957,-15.818)
C1': (110.011,-22.513,-14.040)
C5': (110.180,-23.456,-17.496)
O6: (112.844,-26.365,-10.385)
O4': (109.426,-22.980,-15.242)
C8: (110.799,-24.918,-13.894)
C2: (111.755,-22.998,-10.072)
C6: (112.299,-25.300,-10.707)
C5: (111.645,-24.964,-11.938)
C4: (111.138,-23.690,-12.092)
P: (110.935,-25.946,-17.999)
C4': (110.127,-22.424,-16.384)
C2': (111.079,-21.492,-14.422)
O2': (110.516,-20.201,-14.428)
N1: (112.293,-24.232,-9.815)
N2: (111.869,-22.102,-9.094)
N3: (111.156,-22.665,-11.209)
N7: (111.416,-25.728,-13.079)
N9: (110.612,-23.660,-13.368)
O5': (110.882,-24.637,-17.073)
O3': (112.044,-20.921,-16.595)
OP2: (111.916,-26.904,-17.403)
C3': (111.458,-21.957,-15.818)
C1': (110.011,-22.513,-14.040)
C5': (110.180,-23.456,-17.496)
O6: (112.844,-26.365,-10.385)
O4': (109.426,-22.980,-15.242)
C8: (110.799,-24.918,-13.894)
C2: (111.755,-22.998,-10.072)
C6: (112.299,-25.300,-10.707)
C5: (111.645,-24.964,-11.938)
C4: (111.138,-23.690,-12.092)
P: (110.935,-25.946,-17.999)
C4': (110.127,-22.424,-16.384)
C2': (111.079,-21.492,-14.422)
O2': (110.516,-20.201,-14.428)
N1: (112.293,-24.232,-9.815)
N2: (111.869,-22.102,-9.094)
N3: (111.156,-22.665,-11.209)
N7: (111.416,-25.728,-13.079)
N9: (110.612,-23.660,-13.368)
O5': (110.882,-24.637,-17.073)
O3': (112.044,-20.921,-16.595)
OP1: (110.442,-31.232,-18.961)
OP2: (111.067,-32.063,-16.607)
C3': (109.138,-27.293,-16.658)
C1': (107.695,-27.276,-14.774)
C5': (108.280,-29.582,-17.521)
O6: (109.632,-27.530,-9.090)
O4': (107.426,-28.430,-15.551)
C8: (108.662,-28.910,-13.068)
C2: (108.360,-24.967,-11.203)
C6: (109.185,-27.007,-10.122)
C5: (108.916,-27.614,-11.395)
C4: (108.406,-26.826,-12.404)
P: (110.054,-31.518,-17.551)
C4': (107.976,-28.246,-16.877)
C2': (108.607,-26.354,-15.581)
O2': (107.828,-25.306,-16.114)
N1: (108.870,-25.652,-10.128)
N2: (108.114,-23.670,-11.015)
N3: (108.106,-25.513,-12.380)
N7: (109.072,-28.927,-11.827)
N9: (108.237,-27.666,-13.476)
O5': (109.416,-30.200,-16.914)
O3': (109.466,-26.584,-17.841)
OP2: (111.067,-32.063,-16.607)
C3': (109.138,-27.293,-16.658)
C1': (107.695,-27.276,-14.774)
C5': (108.280,-29.582,-17.521)
O6: (109.632,-27.530,-9.090)
O4': (107.426,-28.430,-15.551)
C8: (108.662,-28.910,-13.068)
C2: (108.360,-24.967,-11.203)
C6: (109.185,-27.007,-10.122)
C5: (108.916,-27.614,-11.395)
C4: (108.406,-26.826,-12.404)
P: (110.054,-31.518,-17.551)
C4': (107.976,-28.246,-16.877)
C2': (108.607,-26.354,-15.581)
O2': (107.828,-25.306,-16.114)
N1: (108.870,-25.652,-10.128)
N2: (108.114,-23.670,-11.015)
N3: (108.106,-25.513,-12.380)
N7: (109.072,-28.927,-11.827)
N9: (108.237,-27.666,-13.476)
O5': (109.416,-30.200,-16.914)
O3': (109.466,-26.584,-17.841)
Image (generated by PyMOL):