Doublet info:
Details
Nucleotide types:
GG
Description:
None: None
Program used:
None
Has errors:
False
Source
PDB id:
1YIT:02681:02499
Extra
PDB:
ATOM 1 O3' A A2680 42.171 162.432 107.872 1.00 36.51 O
ATOM 2 P G A2681 41.426 163.289 109.004 1.00 39.51 P
ATOM 3 OP1 G A2681 40.653 164.293 108.233 1.00 39.28 O
ATOM 4 OP2 G A2681 42.416 163.747 110.013 1.00 38.16 O
ATOM 5 O5' G A2681 40.418 162.257 109.696 1.00 37.68 O
ATOM 6 C5' G A2681 39.289 161.739 108.975 1.00 36.87 C
ATOM 7 C4' G A2681 38.737 160.490 109.637 1.00 38.14 C
ATOM 8 O4' G A2681 39.777 159.484 109.773 1.00 38.42 O
ATOM 9 C3' G A2681 38.244 160.582 111.071 1.00 37.60 C
ATOM 10 O3' G A2681 36.971 161.203 111.190 1.00 38.84 O
ATOM 11 C2' G A2681 38.125 159.107 111.429 1.00 36.51 C
ATOM 12 O2' G A2681 36.950 158.518 110.922 1.00 36.53 O
ATOM 13 C1' G A2681 39.345 158.516 110.715 1.00 37.89 C
ATOM 14 N9 G A2681 40.397 158.260 111.691 1.00 38.29 N
ATOM 15 C8 G A2681 40.644 157.065 112.319 1.00 37.77 C
ATOM 16 N7 G A2681 41.554 157.152 113.248 1.00 37.59 N
ATOM 17 C5 G A2681 41.952 158.478 113.217 1.00 38.86 C
ATOM 18 C6 G A2681 42.893 159.165 114.012 1.00 40.12 C
ATOM 19 O6 G A2681 43.550 158.735 114.966 1.00 42.53 O
ATOM 20 N1 G A2681 43.026 160.492 113.618 1.00 41.30 N
ATOM 21 C2 G A2681 42.327 161.087 112.598 1.00 41.73 C
ATOM 22 N2 G A2681 42.633 162.366 112.343 1.00 41.89 N
ATOM 23 N3 G A2681 41.406 160.467 111.876 1.00 40.64 N
ATOM 24 C4 G A2681 41.277 159.170 112.233 1.00 39.64 C
ATOM 25 P A A2682 36.629 162.099 112.491 1.00 39.79 P
ATOM 26 OP1 A A2682 35.153 162.281 112.501 1.00 39.49 O
ATOM 27 OP2 A A2682 37.521 163.290 112.470 1.00 38.93 O
ATOM 28 O5' A A2682 37.015 161.189 113.743 1.00 37.17 O
TER
ATOM 1 O3' G B2498 41.579 154.797 116.788 1.00 37.62 O
ATOM 2 P G B2499 39.992 154.970 117.018 1.00 37.52 P
ATOM 3 OP1 G B2499 39.840 156.013 118.062 1.00 37.43 O
ATOM 4 OP2 G B2499 39.354 153.639 117.214 1.00 36.57 O
ATOM 5 O5' G B2499 39.502 155.565 115.623 1.00 38.44 O
ATOM 6 C5' G B2499 38.122 155.515 115.221 1.00 38.68 C
ATOM 7 C4' G B2499 38.021 155.556 113.712 1.00 38.10 C
ATOM 8 O4' G B2499 38.766 154.444 113.149 1.00 38.21 O
ATOM 9 C3' G B2499 36.618 155.386 113.160 1.00 38.47 C
ATOM 10 O3' G B2499 35.912 156.624 113.153 1.00 40.20 O
ATOM 11 C2' G B2499 36.883 154.834 111.768 1.00 36.48 C
ATOM 12 O2' G B2499 37.304 155.833 110.868 1.00 34.83 O
ATOM 13 C1' G B2499 38.062 153.901 112.043 1.00 36.65 C
ATOM 14 N9 G B2499 37.661 152.538 112.385 1.00 36.33 N
ATOM 15 C8 G B2499 37.985 151.842 113.526 1.00 35.98 C
ATOM 16 N7 G B2499 37.469 150.644 113.560 1.00 36.29 N
ATOM 17 C5 G B2499 36.765 150.539 112.370 1.00 36.09 C
ATOM 18 C6 G B2499 36.012 149.465 111.848 1.00 36.24 C
ATOM 19 O6 G B2499 35.803 148.359 112.352 1.00 37.68 O
ATOM 20 N1 G B2499 35.475 149.773 110.605 1.00 35.34 N
ATOM 21 C2 G B2499 35.642 150.963 109.949 1.00 37.24 C
ATOM 22 N2 G B2499 35.045 151.073 108.759 1.00 39.03 N
ATOM 23 N3 G B2499 36.345 151.975 110.424 1.00 37.95 N
ATOM 24 C4 G B2499 36.876 151.696 111.631 1.00 36.73 C
ATOM 25 P U B2500 34.339 156.643 113.484 1.00 39.30 P
ATOM 26 OP1 U B2500 33.930 158.066 113.565 1.00 38.20 O
ATOM 27 OP2 U B2500 34.083 155.744 114.630 1.00 39.52 O
ATOM 28 O5' U B2500 33.683 155.984 112.195 1.00 38.50 O
TER
ATOM 2 P G A2681 41.426 163.289 109.004 1.00 39.51 P
ATOM 3 OP1 G A2681 40.653 164.293 108.233 1.00 39.28 O
ATOM 4 OP2 G A2681 42.416 163.747 110.013 1.00 38.16 O
ATOM 5 O5' G A2681 40.418 162.257 109.696 1.00 37.68 O
ATOM 6 C5' G A2681 39.289 161.739 108.975 1.00 36.87 C
ATOM 7 C4' G A2681 38.737 160.490 109.637 1.00 38.14 C
ATOM 8 O4' G A2681 39.777 159.484 109.773 1.00 38.42 O
ATOM 9 C3' G A2681 38.244 160.582 111.071 1.00 37.60 C
ATOM 10 O3' G A2681 36.971 161.203 111.190 1.00 38.84 O
ATOM 11 C2' G A2681 38.125 159.107 111.429 1.00 36.51 C
ATOM 12 O2' G A2681 36.950 158.518 110.922 1.00 36.53 O
ATOM 13 C1' G A2681 39.345 158.516 110.715 1.00 37.89 C
ATOM 14 N9 G A2681 40.397 158.260 111.691 1.00 38.29 N
ATOM 15 C8 G A2681 40.644 157.065 112.319 1.00 37.77 C
ATOM 16 N7 G A2681 41.554 157.152 113.248 1.00 37.59 N
ATOM 17 C5 G A2681 41.952 158.478 113.217 1.00 38.86 C
ATOM 18 C6 G A2681 42.893 159.165 114.012 1.00 40.12 C
ATOM 19 O6 G A2681 43.550 158.735 114.966 1.00 42.53 O
ATOM 20 N1 G A2681 43.026 160.492 113.618 1.00 41.30 N
ATOM 21 C2 G A2681 42.327 161.087 112.598 1.00 41.73 C
ATOM 22 N2 G A2681 42.633 162.366 112.343 1.00 41.89 N
ATOM 23 N3 G A2681 41.406 160.467 111.876 1.00 40.64 N
ATOM 24 C4 G A2681 41.277 159.170 112.233 1.00 39.64 C
ATOM 25 P A A2682 36.629 162.099 112.491 1.00 39.79 P
ATOM 26 OP1 A A2682 35.153 162.281 112.501 1.00 39.49 O
ATOM 27 OP2 A A2682 37.521 163.290 112.470 1.00 38.93 O
ATOM 28 O5' A A2682 37.015 161.189 113.743 1.00 37.17 O
TER
ATOM 1 O3' G B2498 41.579 154.797 116.788 1.00 37.62 O
ATOM 2 P G B2499 39.992 154.970 117.018 1.00 37.52 P
ATOM 3 OP1 G B2499 39.840 156.013 118.062 1.00 37.43 O
ATOM 4 OP2 G B2499 39.354 153.639 117.214 1.00 36.57 O
ATOM 5 O5' G B2499 39.502 155.565 115.623 1.00 38.44 O
ATOM 6 C5' G B2499 38.122 155.515 115.221 1.00 38.68 C
ATOM 7 C4' G B2499 38.021 155.556 113.712 1.00 38.10 C
ATOM 8 O4' G B2499 38.766 154.444 113.149 1.00 38.21 O
ATOM 9 C3' G B2499 36.618 155.386 113.160 1.00 38.47 C
ATOM 10 O3' G B2499 35.912 156.624 113.153 1.00 40.20 O
ATOM 11 C2' G B2499 36.883 154.834 111.768 1.00 36.48 C
ATOM 12 O2' G B2499 37.304 155.833 110.868 1.00 34.83 O
ATOM 13 C1' G B2499 38.062 153.901 112.043 1.00 36.65 C
ATOM 14 N9 G B2499 37.661 152.538 112.385 1.00 36.33 N
ATOM 15 C8 G B2499 37.985 151.842 113.526 1.00 35.98 C
ATOM 16 N7 G B2499 37.469 150.644 113.560 1.00 36.29 N
ATOM 17 C5 G B2499 36.765 150.539 112.370 1.00 36.09 C
ATOM 18 C6 G B2499 36.012 149.465 111.848 1.00 36.24 C
ATOM 19 O6 G B2499 35.803 148.359 112.352 1.00 37.68 O
ATOM 20 N1 G B2499 35.475 149.773 110.605 1.00 35.34 N
ATOM 21 C2 G B2499 35.642 150.963 109.949 1.00 37.24 C
ATOM 22 N2 G B2499 35.045 151.073 108.759 1.00 39.03 N
ATOM 23 N3 G B2499 36.345 151.975 110.424 1.00 37.95 N
ATOM 24 C4 G B2499 36.876 151.696 111.631 1.00 36.73 C
ATOM 25 P U B2500 34.339 156.643 113.484 1.00 39.30 P
ATOM 26 OP1 U B2500 33.930 158.066 113.565 1.00 38.20 O
ATOM 27 OP2 U B2500 34.083 155.744 114.630 1.00 39.52 O
ATOM 28 O5' U B2500 33.683 155.984 112.195 1.00 38.50 O
TER
Atoms:
OP1: (40.653,164.293,108.233)
OP2: (42.416,163.747,110.013)
C3': (38.244,160.582,111.071)
C1': (39.345,158.516,110.715)
C5': (39.289,161.739,108.975)
O6: (43.550,158.735,114.966)
O4': (39.777,159.484,109.773)
C8: (40.644,157.065,112.319)
C2: (42.327,161.087,112.598)
C6: (42.893,159.165,114.012)
C5: (41.952,158.478,113.217)
C4: (41.277,159.170,112.233)
P: (41.426,163.289,109.004)
C4': (38.737,160.490,109.637)
C2': (38.125,159.107,111.429)
O2': (36.950,158.518,110.922)
N1: (43.026,160.492,113.618)
N2: (42.633,162.366,112.343)
N3: (41.406,160.467,111.876)
N7: (41.554,157.152,113.248)
N9: (40.397,158.260,111.691)
O5': (40.418,162.257,109.696)
O3': (36.971,161.203,111.190)
OP2: (42.416,163.747,110.013)
C3': (38.244,160.582,111.071)
C1': (39.345,158.516,110.715)
C5': (39.289,161.739,108.975)
O6: (43.550,158.735,114.966)
O4': (39.777,159.484,109.773)
C8: (40.644,157.065,112.319)
C2: (42.327,161.087,112.598)
C6: (42.893,159.165,114.012)
C5: (41.952,158.478,113.217)
C4: (41.277,159.170,112.233)
P: (41.426,163.289,109.004)
C4': (38.737,160.490,109.637)
C2': (38.125,159.107,111.429)
O2': (36.950,158.518,110.922)
N1: (43.026,160.492,113.618)
N2: (42.633,162.366,112.343)
N3: (41.406,160.467,111.876)
N7: (41.554,157.152,113.248)
N9: (40.397,158.260,111.691)
O5': (40.418,162.257,109.696)
O3': (36.971,161.203,111.190)
OP1: (39.840,156.013,118.062)
OP2: (39.354,153.639,117.214)
C3': (36.618,155.386,113.160)
C1': (38.062,153.901,112.043)
C5': (38.122,155.515,115.221)
O6: (35.803,148.359,112.352)
O4': (38.766,154.444,113.149)
C8: (37.985,151.842,113.526)
C2: (35.642,150.963,109.949)
C6: (36.012,149.465,111.848)
C5: (36.765,150.539,112.370)
C4: (36.876,151.696,111.631)
P: (39.992,154.970,117.018)
C4': (38.021,155.556,113.712)
C2': (36.883,154.834,111.768)
O2': (37.304,155.833,110.868)
N1: (35.475,149.773,110.605)
N2: (35.045,151.073,108.759)
N3: (36.345,151.975,110.424)
N7: (37.469,150.644,113.560)
N9: (37.661,152.538,112.385)
O5': (39.502,155.565,115.623)
O3': (35.912,156.624,113.153)
OP2: (39.354,153.639,117.214)
C3': (36.618,155.386,113.160)
C1': (38.062,153.901,112.043)
C5': (38.122,155.515,115.221)
O6: (35.803,148.359,112.352)
O4': (38.766,154.444,113.149)
C8: (37.985,151.842,113.526)
C2: (35.642,150.963,109.949)
C6: (36.012,149.465,111.848)
C5: (36.765,150.539,112.370)
C4: (36.876,151.696,111.631)
P: (39.992,154.970,117.018)
C4': (38.021,155.556,113.712)
C2': (36.883,154.834,111.768)
O2': (37.304,155.833,110.868)
N1: (35.475,149.773,110.605)
N2: (35.045,151.073,108.759)
N3: (36.345,151.975,110.424)
N7: (37.469,150.644,113.560)
N9: (37.661,152.538,112.385)
O5': (39.502,155.565,115.623)
O3': (35.912,156.624,113.153)
Image (generated by PyMOL):