ClaRNA

Doublet info:

Details

Nucleotide types: GG
Description: None: None
Program used: None
Has errors: False

Source

PDB id: 3HHN:C103:C102

Extra

PDB:
ATOM 1 O3' G A 102 -14.464 17.596 5.014 1.00 75.78 O
ATOM 2 P G A 103 -15.062 16.240 4.413 1.00 77.72 P
ATOM 3 OP1 G A 103 -15.535 16.535 3.042 1.00 64.54 O
ATOM 4 OP2 G A 103 -15.989 15.651 5.406 1.00 65.90 O
ATOM 5 O5' G A 103 -13.759 15.320 4.311 1.00 67.71 O
ATOM 6 C5' G A 103 -12.699 15.711 3.452 1.00 67.40 C
ATOM 7 C4' G A 103 -11.361 15.363 4.072 1.00 73.95 C
ATOM 8 O4' G A 103 -11.196 16.117 5.300 1.00 75.99 O
ATOM 9 C3' G A 103 -11.194 13.916 4.512 1.00 77.79 C
ATOM 10 O3' G A 103 -10.858 13.080 3.406 1.00 87.60 O
ATOM 11 C2' G A 103 -10.042 14.067 5.500 1.00 67.02 C
ATOM 12 O2' G A 103 -8.793 14.241 4.862 1.00 70.63 O
ATOM 13 C1' G A 103 -10.453 15.345 6.224 1.00 65.43 C
ATOM 14 N9 G A 103 -11.290 15.053 7.380 1.00 55.62 N
ATOM 15 C8 G A 103 -12.660 14.963 7.421 1.00 55.81 C
ATOM 16 N7 G A 103 -13.123 14.673 8.607 1.00 51.06 N
ATOM 17 C5 G A 103 -11.986 14.558 9.398 1.00 45.43 C
ATOM 18 C6 G A 103 -11.856 14.259 10.773 1.00 46.70 C
ATOM 19 O6 G A 103 -12.749 14.025 11.597 1.00 55.23 O
ATOM 20 N1 G A 103 -10.524 14.243 11.174 1.00 46.30 N
ATOM 21 C2 G A 103 -9.452 14.487 10.349 1.00 45.92 C
ATOM 22 N2 G A 103 -8.242 14.427 10.919 1.00 49.88 N
ATOM 23 N3 G A 103 -9.557 14.771 9.058 1.00 45.67 N
ATOM 24 C4 G A 103 -10.850 14.788 8.655 1.00 52.00 C
ATOM 25 P U A 104 -10.788 11.488 3.580 1.00 98.69 P
ATOM 26 OP1 U A 104 -10.525 10.902 2.246 1.00 97.35 O
ATOM 27 OP2 U A 104 -11.936 11.015 4.386 1.00 56.42 O
ATOM 28 O5' U A 104 -9.473 11.316 4.461 1.00 69.25 O
TER

ATOM 1 O3' C B 101 -19.308 19.758 8.005 1.00 61.34 O
ATOM 2 P G B 102 -18.997 18.299 7.415 1.00 65.04 P
ATOM 3 OP1 G B 102 -19.633 18.224 6.081 1.00 69.84 O
ATOM 4 OP2 G B 102 -19.331 17.293 8.448 1.00 48.53 O
ATOM 5 O5' G B 102 -17.410 18.302 7.206 1.00 57.37 O
ATOM 6 C5' G B 102 -16.802 19.266 6.353 1.00 59.97 C
ATOM 7 C4' G B 102 -15.292 19.258 6.516 1.00 60.88 C
ATOM 8 O4' G B 102 -14.927 19.690 7.849 1.00 58.37 O
ATOM 9 C3' G B 102 -14.638 17.895 6.388 1.00 64.38 C
ATOM 10 O3' G B 102 -14.464 17.596 5.014 1.00 75.78 O
ATOM 11 C2' G B 102 -13.307 18.143 7.090 1.00 60.04 C
ATOM 12 O2' G B 102 -12.375 18.807 6.258 1.00 65.60 O
ATOM 13 C1' G B 102 -13.722 19.060 8.237 1.00 41.24 C
ATOM 14 N9 G B 102 -13.970 18.362 9.492 1.00 38.78 N
ATOM 15 C8 G B 102 -15.189 17.975 9.993 1.00 39.58 C
ATOM 16 N7 G B 102 -15.108 17.367 11.145 1.00 33.53 N
ATOM 17 C5 G B 102 -13.748 17.350 11.427 1.00 37.65 C
ATOM 18 C6 G B 102 -13.056 16.820 12.542 1.00 42.17 C
ATOM 19 O6 G B 102 -13.526 16.243 13.535 1.00 46.16 O
ATOM 20 N1 G B 102 -11.680 17.013 12.433 1.00 38.28 N
ATOM 21 C2 G B 102 -11.058 17.640 11.379 1.00 40.07 C
ATOM 22 N2 G B 102 -9.722 17.733 11.451 1.00 43.51 N
ATOM 23 N3 G B 102 -11.695 18.141 10.327 1.00 34.61 N
ATOM 24 C4 G B 102 -13.034 17.961 10.419 1.00 39.00 C
ATOM 25 P G B 103 -15.062 16.240 4.413 1.00 77.72 P
ATOM 26 OP1 G B 103 -15.535 16.535 3.042 1.00 64.54 O
ATOM 27 OP2 G B 103 -15.989 15.651 5.406 1.00 65.90 O
ATOM 28 O5' G B 103 -13.759 15.320 4.311 1.00 67.71 O
TER

Atoms:
OP1: (-15.535,16.535,3.042)
OP2: (-15.989,15.651,5.406)
C3': (-11.194,13.916,4.512)
C1': (-10.453,15.345,6.224)
C5': (-12.699,15.711,3.452)
O6: (-12.749,14.025,11.597)
O4': (-11.196,16.117,5.300)
C8: (-12.660,14.963,7.421)
C2: (-9.452,14.487,10.349)
C6: (-11.856,14.259,10.773)
C5: (-11.986,14.558,9.398)
C4: (-10.850,14.788,8.655)
P: (-15.062,16.240,4.413)
C4': (-11.361,15.363,4.072)
C2': (-10.042,14.067,5.500)
O2': (-8.793,14.241,4.862)
N1: (-10.524,14.243,11.174)
N2: (-8.242,14.427,10.919)
N3: (-9.557,14.771,9.058)
N7: (-13.123,14.673,8.607)
N9: (-11.290,15.053,7.380)
O5': (-13.759,15.320,4.311)
O3': (-10.858,13.080,3.406)
OP1: (-19.633,18.224,6.081)
OP2: (-19.331,17.293,8.448)
C3': (-14.638,17.895,6.388)
C1': (-13.722,19.060,8.237)
C5': (-16.802,19.266,6.353)
O6: (-13.526,16.243,13.535)
O4': (-14.927,19.690,7.849)
C8: (-15.189,17.975,9.993)
C2: (-11.058,17.640,11.379)
C6: (-13.056,16.820,12.542)
C5: (-13.748,17.350,11.427)
C4: (-13.034,17.961,10.419)
P: (-18.997,18.299,7.415)
C4': (-15.292,19.258,6.516)
C2': (-13.307,18.143,7.090)
O2': (-12.375,18.807,6.258)
N1: (-11.680,17.013,12.433)
N2: (-9.722,17.733,11.451)
N3: (-11.695,18.141,10.327)
N7: (-15.108,17.367,11.145)
N9: (-13.970,18.362,9.492)
O5': (-17.410,18.302,7.206)
O3': (-14.464,17.596,5.014)
Image (generated by PyMOL):
PyMOL image
show in jmol