Doublet info:
Details
Nucleotide types:
GG
Description:
None: None
Program used:
None
Has errors:
False
Source
PDB id:
1YHQ:02681:02499
Extra
PDB:
ATOM 1 O3' A A2680 41.947 161.909 108.184 1.00 30.43 O
ATOM 2 P G A2681 41.288 162.818 109.331 1.00 32.96 P
ATOM 3 OP1 G A2681 40.593 163.903 108.601 1.00 32.96 O
ATOM 4 OP2 G A2681 42.323 163.160 110.340 1.00 33.32 O
ATOM 5 O5' G A2681 40.215 161.869 110.034 1.00 30.23 O
ATOM 6 C5' G A2681 39.105 161.351 109.298 1.00 29.11 C
ATOM 7 C4' G A2681 38.573 160.088 109.939 1.00 29.63 C
ATOM 8 O4' G A2681 39.633 159.104 110.082 1.00 30.36 O
ATOM 9 C3' G A2681 38.073 160.165 111.372 1.00 30.09 C
ATOM 10 O3' G A2681 36.796 160.782 111.478 1.00 31.42 O
ATOM 11 C2' G A2681 37.964 158.682 111.709 1.00 29.33 C
ATOM 12 O2' G A2681 36.811 158.083 111.157 1.00 31.57 O
ATOM 13 C1' G A2681 39.203 158.117 111.006 1.00 28.73 C
ATOM 14 N9 G A2681 40.246 157.845 111.991 1.00 28.63 N
ATOM 15 C8 G A2681 40.474 156.632 112.595 1.00 29.33 C
ATOM 16 N7 G A2681 41.361 156.692 113.549 1.00 28.19 N
ATOM 17 C5 G A2681 41.767 158.018 113.562 1.00 27.49 C
ATOM 18 C6 G A2681 42.688 158.677 114.404 1.00 29.11 C
ATOM 19 O6 G A2681 43.299 158.224 115.382 1.00 32.21 O
ATOM 20 N1 G A2681 42.860 160.005 114.033 1.00 27.81 N
ATOM 21 C2 G A2681 42.208 160.625 113.001 1.00 29.42 C
ATOM 22 N2 G A2681 42.574 161.898 112.762 1.00 27.58 N
ATOM 23 N3 G A2681 41.285 160.037 112.247 1.00 28.03 N
ATOM 24 C4 G A2681 41.125 158.738 112.575 1.00 27.88 C
ATOM 25 P A A2682 36.409 161.617 112.804 1.00 31.24 P
ATOM 26 OP1 A A2682 34.927 161.735 112.792 1.00 33.42 O
ATOM 27 OP2 A A2682 37.246 162.847 112.870 1.00 31.51 O
ATOM 28 O5' A A2682 36.816 160.680 114.027 1.00 31.00 O
TER
ATOM 1 O3' G B2498 41.313 154.337 117.230 1.00 32.34 O
ATOM 2 P G B2499 39.716 154.482 117.426 1.00 32.96 P
ATOM 3 OP1 G B2499 39.495 155.576 118.387 1.00 34.39 O
ATOM 4 OP2 G B2499 39.128 153.144 117.696 1.00 31.81 O
ATOM 5 O5' G B2499 39.223 154.976 115.992 1.00 34.20 O
ATOM 6 C5' G B2499 37.866 154.792 115.553 1.00 32.19 C
ATOM 7 C4' G B2499 37.781 154.947 114.048 1.00 32.51 C
ATOM 8 O4' G B2499 38.596 153.935 113.387 1.00 32.32 O
ATOM 9 C3' G B2499 36.390 154.782 113.457 1.00 31.71 C
ATOM 10 O3' G B2499 35.693 156.023 113.491 1.00 34.66 O
ATOM 11 C2' G B2499 36.693 154.312 112.042 1.00 30.21 C
ATOM 12 O2' G B2499 37.119 155.369 111.215 1.00 30.69 O
ATOM 13 C1' G B2499 37.883 153.384 112.290 1.00 27.77 C
ATOM 14 N9 G B2499 37.478 152.029 112.661 1.00 25.71 N
ATOM 15 C8 G B2499 37.783 151.370 113.828 1.00 26.16 C
ATOM 16 N7 G B2499 37.272 150.172 113.890 1.00 26.32 N
ATOM 17 C5 G B2499 36.594 150.027 112.690 1.00 25.53 C
ATOM 18 C6 G B2499 35.860 148.937 112.190 1.00 25.69 C
ATOM 19 O6 G B2499 35.654 147.850 112.725 1.00 28.86 O
ATOM 20 N1 G B2499 35.338 149.202 110.927 1.00 23.99 N
ATOM 21 C2 G B2499 35.504 150.373 110.242 1.00 25.45 C
ATOM 22 N2 G B2499 34.912 150.452 109.049 1.00 26.29 N
ATOM 23 N3 G B2499 36.198 151.401 110.697 1.00 26.91 N
ATOM 24 C4 G B2499 36.712 151.161 111.919 1.00 25.19 C
ATOM 25 P U B2500 34.128 156.061 113.858 1.00 34.95 P
ATOM 26 OP1 U B2500 33.748 157.495 113.898 1.00 34.47 O
ATOM 27 OP2 U B2500 33.855 155.197 115.031 1.00 32.31 O
ATOM 28 O5' U B2500 33.437 155.411 112.582 1.00 36.75 O
TER
ATOM 2 P G A2681 41.288 162.818 109.331 1.00 32.96 P
ATOM 3 OP1 G A2681 40.593 163.903 108.601 1.00 32.96 O
ATOM 4 OP2 G A2681 42.323 163.160 110.340 1.00 33.32 O
ATOM 5 O5' G A2681 40.215 161.869 110.034 1.00 30.23 O
ATOM 6 C5' G A2681 39.105 161.351 109.298 1.00 29.11 C
ATOM 7 C4' G A2681 38.573 160.088 109.939 1.00 29.63 C
ATOM 8 O4' G A2681 39.633 159.104 110.082 1.00 30.36 O
ATOM 9 C3' G A2681 38.073 160.165 111.372 1.00 30.09 C
ATOM 10 O3' G A2681 36.796 160.782 111.478 1.00 31.42 O
ATOM 11 C2' G A2681 37.964 158.682 111.709 1.00 29.33 C
ATOM 12 O2' G A2681 36.811 158.083 111.157 1.00 31.57 O
ATOM 13 C1' G A2681 39.203 158.117 111.006 1.00 28.73 C
ATOM 14 N9 G A2681 40.246 157.845 111.991 1.00 28.63 N
ATOM 15 C8 G A2681 40.474 156.632 112.595 1.00 29.33 C
ATOM 16 N7 G A2681 41.361 156.692 113.549 1.00 28.19 N
ATOM 17 C5 G A2681 41.767 158.018 113.562 1.00 27.49 C
ATOM 18 C6 G A2681 42.688 158.677 114.404 1.00 29.11 C
ATOM 19 O6 G A2681 43.299 158.224 115.382 1.00 32.21 O
ATOM 20 N1 G A2681 42.860 160.005 114.033 1.00 27.81 N
ATOM 21 C2 G A2681 42.208 160.625 113.001 1.00 29.42 C
ATOM 22 N2 G A2681 42.574 161.898 112.762 1.00 27.58 N
ATOM 23 N3 G A2681 41.285 160.037 112.247 1.00 28.03 N
ATOM 24 C4 G A2681 41.125 158.738 112.575 1.00 27.88 C
ATOM 25 P A A2682 36.409 161.617 112.804 1.00 31.24 P
ATOM 26 OP1 A A2682 34.927 161.735 112.792 1.00 33.42 O
ATOM 27 OP2 A A2682 37.246 162.847 112.870 1.00 31.51 O
ATOM 28 O5' A A2682 36.816 160.680 114.027 1.00 31.00 O
TER
ATOM 1 O3' G B2498 41.313 154.337 117.230 1.00 32.34 O
ATOM 2 P G B2499 39.716 154.482 117.426 1.00 32.96 P
ATOM 3 OP1 G B2499 39.495 155.576 118.387 1.00 34.39 O
ATOM 4 OP2 G B2499 39.128 153.144 117.696 1.00 31.81 O
ATOM 5 O5' G B2499 39.223 154.976 115.992 1.00 34.20 O
ATOM 6 C5' G B2499 37.866 154.792 115.553 1.00 32.19 C
ATOM 7 C4' G B2499 37.781 154.947 114.048 1.00 32.51 C
ATOM 8 O4' G B2499 38.596 153.935 113.387 1.00 32.32 O
ATOM 9 C3' G B2499 36.390 154.782 113.457 1.00 31.71 C
ATOM 10 O3' G B2499 35.693 156.023 113.491 1.00 34.66 O
ATOM 11 C2' G B2499 36.693 154.312 112.042 1.00 30.21 C
ATOM 12 O2' G B2499 37.119 155.369 111.215 1.00 30.69 O
ATOM 13 C1' G B2499 37.883 153.384 112.290 1.00 27.77 C
ATOM 14 N9 G B2499 37.478 152.029 112.661 1.00 25.71 N
ATOM 15 C8 G B2499 37.783 151.370 113.828 1.00 26.16 C
ATOM 16 N7 G B2499 37.272 150.172 113.890 1.00 26.32 N
ATOM 17 C5 G B2499 36.594 150.027 112.690 1.00 25.53 C
ATOM 18 C6 G B2499 35.860 148.937 112.190 1.00 25.69 C
ATOM 19 O6 G B2499 35.654 147.850 112.725 1.00 28.86 O
ATOM 20 N1 G B2499 35.338 149.202 110.927 1.00 23.99 N
ATOM 21 C2 G B2499 35.504 150.373 110.242 1.00 25.45 C
ATOM 22 N2 G B2499 34.912 150.452 109.049 1.00 26.29 N
ATOM 23 N3 G B2499 36.198 151.401 110.697 1.00 26.91 N
ATOM 24 C4 G B2499 36.712 151.161 111.919 1.00 25.19 C
ATOM 25 P U B2500 34.128 156.061 113.858 1.00 34.95 P
ATOM 26 OP1 U B2500 33.748 157.495 113.898 1.00 34.47 O
ATOM 27 OP2 U B2500 33.855 155.197 115.031 1.00 32.31 O
ATOM 28 O5' U B2500 33.437 155.411 112.582 1.00 36.75 O
TER
Atoms:
OP1: (40.593,163.903,108.601)
OP2: (42.323,163.160,110.340)
C3': (38.073,160.165,111.372)
C1': (39.203,158.117,111.006)
C5': (39.105,161.351,109.298)
O6: (43.299,158.224,115.382)
O4': (39.633,159.104,110.082)
C8: (40.474,156.632,112.595)
C2: (42.208,160.625,113.001)
C6: (42.688,158.677,114.404)
C5: (41.767,158.018,113.562)
C4: (41.125,158.738,112.575)
P: (41.288,162.818,109.331)
C4': (38.573,160.088,109.939)
C2': (37.964,158.682,111.709)
O2': (36.811,158.083,111.157)
N1: (42.860,160.005,114.033)
N2: (42.574,161.898,112.762)
N3: (41.285,160.037,112.247)
N7: (41.361,156.692,113.549)
N9: (40.246,157.845,111.991)
O5': (40.215,161.869,110.034)
O3': (36.796,160.782,111.478)
OP2: (42.323,163.160,110.340)
C3': (38.073,160.165,111.372)
C1': (39.203,158.117,111.006)
C5': (39.105,161.351,109.298)
O6: (43.299,158.224,115.382)
O4': (39.633,159.104,110.082)
C8: (40.474,156.632,112.595)
C2: (42.208,160.625,113.001)
C6: (42.688,158.677,114.404)
C5: (41.767,158.018,113.562)
C4: (41.125,158.738,112.575)
P: (41.288,162.818,109.331)
C4': (38.573,160.088,109.939)
C2': (37.964,158.682,111.709)
O2': (36.811,158.083,111.157)
N1: (42.860,160.005,114.033)
N2: (42.574,161.898,112.762)
N3: (41.285,160.037,112.247)
N7: (41.361,156.692,113.549)
N9: (40.246,157.845,111.991)
O5': (40.215,161.869,110.034)
O3': (36.796,160.782,111.478)
OP1: (39.495,155.576,118.387)
OP2: (39.128,153.144,117.696)
C3': (36.390,154.782,113.457)
C1': (37.883,153.384,112.290)
C5': (37.866,154.792,115.553)
O6: (35.654,147.850,112.725)
O4': (38.596,153.935,113.387)
C8: (37.783,151.370,113.828)
C2: (35.504,150.373,110.242)
C6: (35.860,148.937,112.190)
C5: (36.594,150.027,112.690)
C4: (36.712,151.161,111.919)
P: (39.716,154.482,117.426)
C4': (37.781,154.947,114.048)
C2': (36.693,154.312,112.042)
O2': (37.119,155.369,111.215)
N1: (35.338,149.202,110.927)
N2: (34.912,150.452,109.049)
N3: (36.198,151.401,110.697)
N7: (37.272,150.172,113.890)
N9: (37.478,152.029,112.661)
O5': (39.223,154.976,115.992)
O3': (35.693,156.023,113.491)
OP2: (39.128,153.144,117.696)
C3': (36.390,154.782,113.457)
C1': (37.883,153.384,112.290)
C5': (37.866,154.792,115.553)
O6: (35.654,147.850,112.725)
O4': (38.596,153.935,113.387)
C8: (37.783,151.370,113.828)
C2: (35.504,150.373,110.242)
C6: (35.860,148.937,112.190)
C5: (36.594,150.027,112.690)
C4: (36.712,151.161,111.919)
P: (39.716,154.482,117.426)
C4': (37.781,154.947,114.048)
C2': (36.693,154.312,112.042)
O2': (37.119,155.369,111.215)
N1: (35.338,149.202,110.927)
N2: (34.912,150.452,109.049)
N3: (36.198,151.401,110.697)
N7: (37.272,150.172,113.890)
N9: (37.478,152.029,112.661)
O5': (39.223,154.976,115.992)
O3': (35.693,156.023,113.491)
Image (generated by PyMOL):