ClaRNA

Doublet info:

Details

Nucleotide types: GG
Description: None: None
Program used: None
Has errors: False

Source

PDB id: 3L3C:S126:S125

Extra

PDB:
ATOM 1 O3' G A 125 29.654 6.230 92.405 1.00 83.99 O
ATOM 2 P G A 126 30.153 4.714 92.572 1.00 86.41 P
ATOM 3 OP1 G A 126 28.969 3.893 92.916 1.00 86.48 O
ATOM 4 OP2 G A 126 31.344 4.671 93.453 1.00 86.06 O
ATOM 5 O5' G A 126 30.597 4.347 91.080 1.00 88.20 O
ATOM 6 C5' G A 126 29.743 4.649 89.975 1.00 91.14 C
ATOM 7 C4' G A 126 30.556 5.102 88.776 1.00 93.40 C
ATOM 8 O4' G A 126 31.407 6.205 89.172 1.00 93.59 O
ATOM 9 C3' G A 126 31.513 4.058 88.219 1.00 95.18 C
ATOM 10 O3' G A 126 30.867 3.247 87.231 1.00 98.26 O
ATOM 11 C2' G A 126 32.650 4.905 87.649 1.00 94.53 C
ATOM 12 O2' G A 126 32.361 5.441 86.370 1.00 94.57 O
ATOM 13 C1' G A 126 32.724 6.030 88.676 1.00 93.65 C
ATOM 14 N9 G A 126 33.646 5.836 89.804 1.00 92.76 N
ATOM 15 C8 G A 126 33.304 5.669 91.125 1.00 92.39 C
ATOM 16 N7 G A 126 34.317 5.534 91.931 1.00 92.16 N
ATOM 17 C5 G A 126 35.416 5.620 91.092 1.00 92.07 C
ATOM 18 C6 G A 126 36.796 5.541 91.404 1.00 91.82 C
ATOM 19 O6 G A 126 37.316 5.376 92.515 1.00 91.53 O
ATOM 20 N1 G A 126 37.594 5.676 90.268 1.00 91.79 N
ATOM 21 C2 G A 126 37.116 5.862 88.988 1.00 92.15 C
ATOM 22 N2 G A 126 38.038 5.970 88.019 1.00 92.17 N
ATOM 23 N3 G A 126 35.821 5.938 88.684 1.00 92.18 N
ATOM 24 C4 G A 126 35.026 5.810 89.780 1.00 92.29 C
ATOM 25 P U A 127 30.413 1.747 87.582 1.00100.45 P
ATOM 26 OP1 U A 127 30.456 0.959 86.327 1.00100.54 O
ATOM 27 OP2 U A 127 29.136 1.836 88.326 1.00100.36 O
ATOM 28 O5' U A 127 31.562 1.224 88.580 1.00102.00 O
TER

ATOM 1 O3' A B 124 29.939 9.580 97.753 1.00 73.87 O
ATOM 2 P G B 125 30.328 8.067 97.391 1.00 74.64 P
ATOM 3 OP1 G B 125 29.164 7.219 97.737 1.00 74.75 O
ATOM 4 OP2 G B 125 31.647 7.790 98.003 1.00 74.46 O
ATOM 5 O5' G B 125 30.495 8.071 95.797 1.00 75.69 O
ATOM 6 C5' G B 125 29.357 8.042 94.943 1.00 77.69 C
ATOM 7 C4' G B 125 29.731 8.387 93.514 1.00 79.37 C
ATOM 8 O4' G B 125 30.648 9.511 93.454 1.00 79.31 O
ATOM 9 C3' G B 125 30.500 7.308 92.776 1.00 80.88 C
ATOM 10 O3' G B 125 29.654 6.230 92.405 1.00 83.99 O
ATOM 11 C2' G B 125 31.034 8.121 91.597 1.00 80.11 C
ATOM 12 O2' G B 125 30.067 8.460 90.619 1.00 79.97 O
ATOM 13 C1' G B 125 31.516 9.363 92.339 1.00 79.05 C
ATOM 14 N9 G B 125 32.896 9.222 92.806 1.00 78.02 N
ATOM 15 C8 G B 125 33.307 9.046 94.106 1.00 77.93 C
ATOM 16 N7 G B 125 34.597 8.941 94.241 1.00 77.72 N
ATOM 17 C5 G B 125 35.079 9.048 92.946 1.00 77.47 C
ATOM 18 C6 G B 125 36.412 9.005 92.475 1.00 77.47 C
ATOM 19 O6 G B 125 37.444 8.860 93.144 1.00 77.72 O
ATOM 20 N1 G B 125 36.486 9.152 91.087 1.00 77.26 N
ATOM 21 C2 G B 125 35.395 9.318 90.262 1.00 77.18 C
ATOM 22 N2 G B 125 35.656 9.443 88.953 1.00 77.09 N
ATOM 23 N3 G B 125 34.137 9.360 90.695 1.00 77.34 N
ATOM 24 C4 G B 125 34.048 9.220 92.046 1.00 77.55 C
ATOM 25 P G B 126 30.153 4.714 92.572 1.00 86.41 P
ATOM 26 OP1 G B 126 28.969 3.893 92.916 1.00 86.48 O
ATOM 27 OP2 G B 126 31.344 4.671 93.453 1.00 86.06 O
ATOM 28 O5' G B 126 30.597 4.347 91.080 1.00 88.20 O
TER

Atoms:
OP1: (28.969,3.893,92.916)
OP2: (31.344,4.671,93.453)
C3': (31.513,4.058,88.219)
C1': (32.724,6.030,88.676)
C5': (29.743,4.649,89.975)
O6: (37.316,5.376,92.515)
O4': (31.407,6.205,89.172)
C8: (33.304,5.669,91.125)
C2: (37.116,5.862,88.988)
C6: (36.796,5.541,91.404)
C5: (35.416,5.620,91.092)
C4: (35.026,5.810,89.780)
P: (30.153,4.714,92.572)
C4': (30.556,5.102,88.776)
C2': (32.650,4.905,87.649)
O2': (32.361,5.441,86.370)
N1: (37.594,5.676,90.268)
N2: (38.038,5.970,88.019)
N3: (35.821,5.938,88.684)
N7: (34.317,5.534,91.931)
N9: (33.646,5.836,89.804)
O5': (30.597,4.347,91.080)
O3': (30.867,3.247,87.231)
OP1: (29.164,7.219,97.737)
OP2: (31.647,7.790,98.003)
C3': (30.500,7.308,92.776)
C1': (31.516,9.363,92.339)
C5': (29.357,8.042,94.943)
O6: (37.444,8.860,93.144)
O4': (30.648,9.511,93.454)
C8: (33.307,9.046,94.106)
C2: (35.395,9.318,90.262)
C6: (36.412,9.005,92.475)
C5: (35.079,9.048,92.946)
C4: (34.048,9.220,92.046)
P: (30.328,8.067,97.391)
C4': (29.731,8.387,93.514)
C2': (31.034,8.121,91.597)
O2': (30.067,8.460,90.619)
N1: (36.486,9.152,91.087)
N2: (35.656,9.443,88.953)
N3: (34.137,9.360,90.695)
N7: (34.597,8.941,94.241)
N9: (32.896,9.222,92.806)
O5': (30.495,8.071,95.797)
O3': (29.654,6.230,92.405)
Image (generated by PyMOL):
PyMOL image
show in jmol