ClaRNA

Doublet info:

Details

Nucleotide types: GG
Description: None: None
Program used: None
Has errors: False

Source

PDB id: 3L3C:R34:R83

Extra

PDB:
ATOM 1 O3' U A 33 19.374 6.120 73.962 1.00 59.04 O
ATOM 2 P G A 34 18.867 4.659 73.568 1.00 58.46 P
ATOM 3 OP1 G A 34 19.024 4.527 72.102 1.00 58.46 O
ATOM 4 OP2 G A 34 17.553 4.420 74.207 1.00 58.61 O
ATOM 5 O5' G A 34 19.951 3.719 74.266 1.00 58.77 O
ATOM 6 C5' G A 34 19.992 3.637 75.686 1.00 59.26 C
ATOM 7 C4' G A 34 20.801 2.443 76.159 1.00 59.52 C
ATOM 8 O4' G A 34 20.117 1.194 75.858 1.00 59.36 O
ATOM 9 C3' G A 34 22.177 2.302 75.526 1.00 59.70 C
ATOM 10 O3' G A 34 23.102 3.155 76.184 1.00 60.42 O
ATOM 11 C2' G A 34 22.446 0.817 75.752 1.00 59.43 C
ATOM 12 O2' G A 34 22.814 0.500 77.079 1.00 59.64 O
ATOM 13 C1' G A 34 21.069 0.224 75.446 1.00 59.12 C
ATOM 14 N9 G A 34 20.885 -0.080 74.024 1.00 58.25 N
ATOM 15 C8 G A 34 19.959 0.474 73.175 1.00 57.88 C
ATOM 16 N7 G A 34 20.032 0.018 71.957 1.00 57.89 N
ATOM 17 C5 G A 34 21.075 -0.897 71.995 1.00 57.56 C
ATOM 18 C6 G A 34 21.617 -1.707 70.967 1.00 57.40 C
ATOM 19 O6 G A 34 21.263 -1.769 69.783 1.00 57.07 O
ATOM 20 N1 G A 34 22.673 -2.502 71.419 1.00 57.71 N
ATOM 21 C2 G A 34 23.145 -2.506 72.715 1.00 58.35 C
ATOM 22 N2 G A 34 24.172 -3.329 72.986 1.00 58.45 N
ATOM 23 N3 G A 34 22.640 -1.749 73.685 1.00 58.33 N
ATOM 24 C4 G A 34 21.611 -0.970 73.260 1.00 57.91 C
ATOM 25 P G A 35 24.229 3.935 75.353 1.00 61.58 P
ATOM 26 OP1 G A 35 24.850 4.930 76.259 1.00 61.53 O
ATOM 27 OP2 G A 35 23.667 4.376 74.055 1.00 61.15 O
ATOM 28 O5' G A 35 25.298 2.779 75.076 1.00 61.72 O
TER

ATOM 1 O3' C B 82 11.641 0.434 70.205 1.00 59.81 O
ATOM 2 P G B 83 12.728 1.536 70.607 1.00 60.59 P
ATOM 3 OP1 G B 83 12.009 2.786 70.937 1.00 60.91 O
ATOM 4 OP2 G B 83 13.778 1.542 69.563 1.00 59.86 O
ATOM 5 O5' G B 83 13.347 0.951 71.962 1.00 61.47 O
ATOM 6 C5' G B 83 12.623 1.064 73.181 1.00 63.04 C
ATOM 7 C4' G B 83 13.516 0.754 74.369 1.00 64.27 C
ATOM 8 O4' G B 83 14.274 -0.453 74.100 1.00 64.17 O
ATOM 9 C3' G B 83 14.552 1.824 74.688 1.00 65.35 C
ATOM 10 O3' G B 83 14.836 1.826 76.081 1.00 67.71 O
ATOM 11 C2' G B 83 15.755 1.365 73.873 1.00 64.94 C
ATOM 12 O2' G B 83 16.979 1.822 74.413 1.00 65.29 O
ATOM 13 C1' G B 83 15.652 -0.150 74.010 1.00 64.01 C
ATOM 14 N9 G B 83 16.210 -0.876 72.872 1.00 63.03 N
ATOM 15 C8 G B 83 15.869 -0.729 71.549 1.00 62.81 C
ATOM 16 N7 G B 83 16.536 -1.515 70.750 1.00 62.56 N
ATOM 17 C5 G B 83 17.373 -2.230 71.597 1.00 62.05 C
ATOM 18 C6 G B 83 18.328 -3.232 71.302 1.00 62.02 C
ATOM 19 O6 G B 83 18.633 -3.700 70.196 1.00 61.75 O
ATOM 20 N1 G B 83 18.960 -3.697 72.453 1.00 62.36 N
ATOM 21 C2 G B 83 18.701 -3.250 73.727 1.00 62.55 C
ATOM 22 N2 G B 83 19.411 -3.818 74.712 1.00 62.59 N
ATOM 23 N3 G B 83 17.808 -2.312 74.017 1.00 62.34 N
ATOM 24 C4 G B 83 17.184 -1.849 72.907 1.00 62.36 C
ATOM 25 P C B 84 14.052 2.824 77.056 1.00 70.10 P
ATOM 26 OP1 C B 84 14.172 4.190 76.500 1.00 70.50 O
ATOM 27 OP2 C B 84 14.496 2.549 78.441 1.00 69.73 O
ATOM 28 O5' C B 84 12.530 2.359 76.896 1.00 71.55 O
TER

Atoms:
OP1: (19.024,4.527,72.102)
OP2: (17.553,4.420,74.207)
C3': (22.177,2.302,75.526)
C1': (21.069,0.224,75.446)
C5': (19.992,3.637,75.686)
O6: (21.263,-1.769,69.783)
O4': (20.117,1.194,75.858)
C8: (19.959,0.474,73.175)
C2: (23.145,-2.506,72.715)
C6: (21.617,-1.707,70.967)
C5: (21.075,-0.897,71.995)
C4: (21.611,-0.970,73.260)
P: (18.867,4.659,73.568)
C4': (20.801,2.443,76.159)
C2': (22.446,0.817,75.752)
O2': (22.814,0.500,77.079)
N1: (22.673,-2.502,71.419)
N2: (24.172,-3.329,72.986)
N3: (22.640,-1.749,73.685)
N7: (20.032,0.018,71.957)
N9: (20.885,-0.080,74.024)
O5': (19.951,3.719,74.266)
O3': (23.102,3.155,76.184)
OP1: (12.009,2.786,70.937)
OP2: (13.778,1.542,69.563)
C3': (14.552,1.824,74.688)
C1': (15.652,-0.150,74.010)
C5': (12.623,1.064,73.181)
O6: (18.633,-3.700,70.196)
O4': (14.274,-0.453,74.100)
C8: (15.869,-0.729,71.549)
C2: (18.701,-3.250,73.727)
C6: (18.328,-3.232,71.302)
C5: (17.373,-2.230,71.597)
C4: (17.184,-1.849,72.907)
P: (12.728,1.536,70.607)
C4': (13.516,0.754,74.369)
C2': (15.755,1.365,73.873)
O2': (16.979,1.822,74.413)
N1: (18.960,-3.697,72.453)
N2: (19.411,-3.818,74.712)
N3: (17.808,-2.312,74.017)
N7: (16.536,-1.515,70.750)
N9: (16.210,-0.876,72.872)
O5': (13.347,0.951,71.962)
O3': (14.836,1.826,76.081)
Image (generated by PyMOL):
PyMOL image
show in jmol