ClaRNA

Doublet info:

Details

Nucleotide types: GG
Description: None: None
Program used: None
Has errors: False

Source

PDB id: 3F1F:A1820:A1819

Extra

PDB:
ATOM 1 O3' G A1819 5.885 150.551 119.826 1.00 46.48 O
ATOM 2 P G A1820 6.204 150.426 118.255 1.00 36.86 P
ATOM 3 OP1 G A1820 7.575 149.889 118.167 1.00 36.95 O
ATOM 4 OP2 G A1820 5.837 151.672 117.533 1.00 45.94 O
ATOM 5 O5' G A1820 5.141 149.330 117.783 1.00 45.00 O
ATOM 6 C5' G A1820 5.114 148.046 118.399 1.00 43.91 C
ATOM 7 C4' G A1820 3.710 147.480 118.537 1.00 31.68 C
ATOM 8 O4' G A1820 3.041 148.062 119.689 1.00 48.74 O
ATOM 9 C3' G A1820 2.800 147.769 117.358 1.00 36.64 C
ATOM 10 O3' G A1820 2.955 146.751 116.418 1.00 39.39 O
ATOM 11 C2' G A1820 1.434 147.688 118.027 1.00 41.57 C
ATOM 12 O2' G A1820 1.054 146.356 118.263 1.00 37.82 O
ATOM 13 C1' G A1820 1.695 148.393 119.358 1.00 50.49 C
ATOM 14 N9 G A1820 1.506 149.859 119.309 1.00 47.93 N
ATOM 15 C8 G A1820 2.466 150.822 119.512 1.00 43.67 C
ATOM 16 N7 G A1820 2.026 152.040 119.405 1.00 46.01 N
ATOM 17 C5 G A1820 0.684 151.886 119.107 1.00 43.39 C
ATOM 18 C6 G A1820 -0.295 152.876 118.874 1.00 54.36 C
ATOM 19 O6 G A1820 -0.149 154.112 118.899 1.00 54.99 O
ATOM 20 N1 G A1820 -1.534 152.301 118.592 1.00 48.03 N
ATOM 21 C2 G A1820 -1.779 150.945 118.545 1.00 47.89 C
ATOM 22 N2 G A1820 -3.039 150.569 118.261 1.00 57.06 N
ATOM 23 N3 G A1820 -0.860 150.011 118.763 1.00 43.16 N
ATOM 24 C4 G A1820 0.345 150.555 119.039 1.00 39.58 C
ATOM 25 P U A1821 2.719 146.990 114.851 1.00 34.56 P
ATOM 26 OP1 U A1821 2.545 145.650 114.240 1.00 42.72 O
ATOM 27 OP2 U A1821 3.759 147.897 114.313 1.00 33.04 O
ATOM 28 O5' U A1821 1.303 147.731 114.831 1.00 34.41 O
TER

ATOM 1 O3' A B1818 4.286 149.675 124.147 1.00 58.59 O
ATOM 2 P G B1819 5.542 148.732 124.443 1.00 43.28 P
ATOM 3 OP1 G B1819 5.143 147.312 124.270 1.00 41.73 O
ATOM 4 OP2 G B1819 6.163 149.222 125.707 1.00 39.60 O
ATOM 5 O5' G B1819 6.504 149.090 123.223 1.00 36.92 O
ATOM 6 C5' G B1819 7.056 150.393 123.116 1.00 44.19 C
ATOM 7 C4' G B1819 6.280 151.275 122.155 1.00 52.18 C
ATOM 8 O4' G B1819 6.406 152.628 122.655 1.00 55.48 O
ATOM 9 C3' G B1819 6.749 151.290 120.692 1.00 55.36 C
ATOM 10 O3' G B1819 5.885 150.551 119.826 1.00 46.48 O
ATOM 11 C2' G B1819 6.727 152.777 120.321 1.00 58.88 C
ATOM 12 O2' G B1819 5.509 153.246 119.771 1.00 53.03 O
ATOM 13 C1' G B1819 6.979 153.450 121.659 1.00 69.66 C
ATOM 14 N9 G B1819 8.420 153.611 121.827 1.00 75.80 N
ATOM 15 C8 G B1819 9.388 152.751 121.364 1.00 65.67 C
ATOM 16 N7 G B1819 10.603 153.139 121.627 1.00 68.63 N
ATOM 17 C5 G B1819 10.433 154.341 122.294 1.00 78.75 C
ATOM 18 C6 G B1819 11.406 155.220 122.818 1.00 98.46 C
ATOM 19 O6 G B1819 12.641 155.080 122.778 1.00104.55 O
ATOM 20 N1 G B1819 10.821 156.339 123.429 1.00105.10 N
ATOM 21 C2 G B1819 9.466 156.578 123.518 1.00 87.30 C
ATOM 22 N2 G B1819 9.102 157.712 124.143 1.00 66.79 N
ATOM 23 N3 G B1819 8.544 155.752 123.022 1.00 91.44 N
ATOM 24 C4 G B1819 9.097 154.656 122.426 1.00 84.53 C
ATOM 25 P G B1820 6.204 150.426 118.255 1.00 36.86 P
ATOM 26 OP1 G B1820 7.575 149.889 118.167 1.00 36.95 O
ATOM 27 OP2 G B1820 5.837 151.672 117.533 1.00 45.94 O
ATOM 28 O5' G B1820 5.141 149.330 117.783 1.00 45.00 O
TER

Atoms:
OP1: (7.575,149.889,118.167)
OP2: (5.837,151.672,117.533)
C3': (2.800,147.769,117.358)
C1': (1.695,148.393,119.358)
C5': (5.114,148.046,118.399)
O6: (-0.149,154.112,118.899)
O4': (3.041,148.062,119.689)
C8: (2.466,150.822,119.512)
C2: (-1.779,150.945,118.545)
C6: (-0.295,152.876,118.874)
C5: (0.684,151.886,119.107)
C4: (0.345,150.555,119.039)
P: (6.204,150.426,118.255)
C4': (3.710,147.480,118.537)
C2': (1.434,147.688,118.027)
O2': (1.054,146.356,118.263)
N1: (-1.534,152.301,118.592)
N2: (-3.039,150.569,118.261)
N3: (-0.860,150.011,118.763)
N7: (2.026,152.040,119.405)
N9: (1.506,149.859,119.309)
O5': (5.141,149.330,117.783)
O3': (2.955,146.751,116.418)
OP1: (5.143,147.312,124.270)
OP2: (6.163,149.222,125.707)
C3': (6.749,151.290,120.692)
C1': (6.979,153.450,121.659)
C5': (7.056,150.393,123.116)
O6: (12.641,155.080,122.778)
O4': (6.406,152.628,122.655)
C8: (9.388,152.751,121.364)
C2: (9.466,156.578,123.518)
C6: (11.406,155.220,122.818)
C5: (10.433,154.341,122.294)
C4: (9.097,154.656,122.426)
P: (5.542,148.732,124.443)
C4': (6.280,151.275,122.155)
C2': (6.727,152.777,120.321)
O2': (5.509,153.246,119.771)
N1: (10.821,156.339,123.429)
N2: (9.102,157.712,124.143)
N3: (8.544,155.752,123.022)
N7: (10.603,153.139,121.627)
N9: (8.420,153.611,121.827)
O5': (6.504,149.090,123.223)
O3': (5.885,150.551,119.826)
Image (generated by PyMOL):
PyMOL image
show in jmol