Doublet info:
Details
Nucleotide types:
GG
Description:
None: None
Program used:
None
Has errors:
False
Source
PDB id:
3SKZ:B25:B24
Extra
PDB:
ATOM 1 O3' G A 24 4.733 -4.185 -10.778 1.00 46.35 O
ATOM 2 P G A 25 4.649 -4.055 -9.177 1.00 46.15 P
ATOM 3 OP1 G A 25 3.465 -4.831 -8.723 1.00 50.46 O
ATOM 4 OP2 G A 25 4.714 -2.607 -8.863 1.00 39.37 O
ATOM 5 O5' G A 25 5.984 -4.775 -8.683 1.00 54.44 O
ATOM 6 C5' G A 25 6.136 -6.189 -8.758 1.00 44.92 C
ATOM 7 C4' G A 25 7.540 -6.575 -9.183 1.00 40.92 C
ATOM 8 O4' G A 25 7.759 -6.191 -10.570 1.00 32.10 O
ATOM 9 C3' G A 25 8.685 -5.893 -8.432 1.00 36.96 C
ATOM 10 O3' G A 25 8.977 -6.477 -7.177 1.00 33.76 O
ATOM 11 C2' G A 25 9.821 -5.984 -9.430 1.00 38.30 C
ATOM 12 O2' G A 25 10.324 -7.316 -9.492 1.00 31.40 O
ATOM 13 C1' G A 25 9.067 -5.692 -10.725 1.00 41.42 C
ATOM 14 N9 G A 25 8.971 -4.243 -11.003 1.00 41.87 N
ATOM 15 C8 G A 25 7.822 -3.493 -10.988 1.00 31.08 C
ATOM 16 N7 G A 25 8.026 -2.239 -11.284 1.00 30.42 N
ATOM 17 C5 G A 25 9.387 -2.157 -11.532 1.00 36.97 C
ATOM 18 C6 G A 25 10.176 -1.036 -11.901 1.00 44.27 C
ATOM 19 O6 G A 25 9.797 0.136 -12.101 1.00 42.22 O
ATOM 20 N1 G A 25 11.527 -1.405 -12.016 1.00 45.70 N
ATOM 21 C2 G A 25 12.051 -2.675 -11.815 1.00 37.08 C
ATOM 22 N2 G A 25 13.378 -2.826 -11.986 1.00 24.57 N
ATOM 23 N3 G A 25 11.318 -3.728 -11.485 1.00 22.66 N
ATOM 24 C4 G A 25 10.001 -3.390 -11.360 1.00 43.80 C
ATOM 25 P C A 26 9.265 -5.531 -5.917 1.00 50.32 P
ATOM 26 OP1 C A 26 9.148 -6.379 -4.707 1.00 49.86 O
ATOM 27 OP2 C A 26 8.380 -4.352 -6.043 1.00 51.16 O
ATOM 28 O5' C A 26 10.787 -5.089 -6.141 1.00 38.28 O
TER
ATOM 1 O3' G B 23 4.950 -9.740 -12.552 1.00 42.99 O
ATOM 2 P G B 24 4.428 -9.234 -11.123 1.00 61.51 P
ATOM 3 OP1 G B 24 5.547 -9.391 -10.164 1.00 63.60 O
ATOM 4 OP2 G B 24 3.152 -9.933 -10.859 1.00 65.59 O
ATOM 5 O5' G B 24 4.158 -7.697 -11.378 1.00 37.73 O
ATOM 6 C5' G B 24 4.953 -6.986 -12.303 1.00 41.12 C
ATOM 7 C4' G B 24 4.335 -5.671 -12.665 1.00 37.03 C
ATOM 8 O4' G B 24 3.229 -5.875 -13.565 1.00 31.70 O
ATOM 9 C3' G B 24 3.741 -4.874 -11.520 1.00 40.45 C
ATOM 10 O3' G B 24 4.733 -4.185 -10.778 1.00 46.35 O
ATOM 11 C2' G B 24 2.769 -3.945 -12.240 1.00 39.36 C
ATOM 12 O2' G B 24 3.454 -2.813 -12.754 1.00 38.56 O
ATOM 13 C1' G B 24 2.308 -4.819 -13.423 1.00 38.84 C
ATOM 14 N9 G B 24 0.961 -5.387 -13.218 1.00 41.68 N
ATOM 15 C8 G B 24 0.648 -6.693 -12.897 1.00 44.13 C
ATOM 16 N7 G B 24 -0.638 -6.905 -12.786 1.00 48.86 N
ATOM 17 C5 G B 24 -1.208 -5.668 -13.055 1.00 50.96 C
ATOM 18 C6 G B 24 -2.571 -5.287 -13.080 1.00 47.23 C
ATOM 19 O6 G B 24 -3.546 -6.002 -12.853 1.00 46.87 O
ATOM 20 N1 G B 24 -2.727 -3.939 -13.395 1.00 43.60 N
ATOM 21 C2 G B 24 -1.693 -3.067 -13.656 1.00 47.13 C
ATOM 22 N2 G B 24 -2.041 -1.804 -13.945 1.00 46.12 N
ATOM 23 N3 G B 24 -0.405 -3.406 -13.635 1.00 47.27 N
ATOM 24 C4 G B 24 -0.240 -4.717 -13.332 1.00 48.33 C
ATOM 25 P G B 25 4.649 -4.055 -9.177 1.00 46.15 P
ATOM 26 OP1 G B 25 3.465 -4.831 -8.723 1.00 50.46 O
ATOM 27 OP2 G B 25 4.714 -2.607 -8.863 1.00 39.37 O
ATOM 28 O5' G B 25 5.984 -4.775 -8.683 1.00 54.44 O
TER
ATOM 2 P G A 25 4.649 -4.055 -9.177 1.00 46.15 P
ATOM 3 OP1 G A 25 3.465 -4.831 -8.723 1.00 50.46 O
ATOM 4 OP2 G A 25 4.714 -2.607 -8.863 1.00 39.37 O
ATOM 5 O5' G A 25 5.984 -4.775 -8.683 1.00 54.44 O
ATOM 6 C5' G A 25 6.136 -6.189 -8.758 1.00 44.92 C
ATOM 7 C4' G A 25 7.540 -6.575 -9.183 1.00 40.92 C
ATOM 8 O4' G A 25 7.759 -6.191 -10.570 1.00 32.10 O
ATOM 9 C3' G A 25 8.685 -5.893 -8.432 1.00 36.96 C
ATOM 10 O3' G A 25 8.977 -6.477 -7.177 1.00 33.76 O
ATOM 11 C2' G A 25 9.821 -5.984 -9.430 1.00 38.30 C
ATOM 12 O2' G A 25 10.324 -7.316 -9.492 1.00 31.40 O
ATOM 13 C1' G A 25 9.067 -5.692 -10.725 1.00 41.42 C
ATOM 14 N9 G A 25 8.971 -4.243 -11.003 1.00 41.87 N
ATOM 15 C8 G A 25 7.822 -3.493 -10.988 1.00 31.08 C
ATOM 16 N7 G A 25 8.026 -2.239 -11.284 1.00 30.42 N
ATOM 17 C5 G A 25 9.387 -2.157 -11.532 1.00 36.97 C
ATOM 18 C6 G A 25 10.176 -1.036 -11.901 1.00 44.27 C
ATOM 19 O6 G A 25 9.797 0.136 -12.101 1.00 42.22 O
ATOM 20 N1 G A 25 11.527 -1.405 -12.016 1.00 45.70 N
ATOM 21 C2 G A 25 12.051 -2.675 -11.815 1.00 37.08 C
ATOM 22 N2 G A 25 13.378 -2.826 -11.986 1.00 24.57 N
ATOM 23 N3 G A 25 11.318 -3.728 -11.485 1.00 22.66 N
ATOM 24 C4 G A 25 10.001 -3.390 -11.360 1.00 43.80 C
ATOM 25 P C A 26 9.265 -5.531 -5.917 1.00 50.32 P
ATOM 26 OP1 C A 26 9.148 -6.379 -4.707 1.00 49.86 O
ATOM 27 OP2 C A 26 8.380 -4.352 -6.043 1.00 51.16 O
ATOM 28 O5' C A 26 10.787 -5.089 -6.141 1.00 38.28 O
TER
ATOM 1 O3' G B 23 4.950 -9.740 -12.552 1.00 42.99 O
ATOM 2 P G B 24 4.428 -9.234 -11.123 1.00 61.51 P
ATOM 3 OP1 G B 24 5.547 -9.391 -10.164 1.00 63.60 O
ATOM 4 OP2 G B 24 3.152 -9.933 -10.859 1.00 65.59 O
ATOM 5 O5' G B 24 4.158 -7.697 -11.378 1.00 37.73 O
ATOM 6 C5' G B 24 4.953 -6.986 -12.303 1.00 41.12 C
ATOM 7 C4' G B 24 4.335 -5.671 -12.665 1.00 37.03 C
ATOM 8 O4' G B 24 3.229 -5.875 -13.565 1.00 31.70 O
ATOM 9 C3' G B 24 3.741 -4.874 -11.520 1.00 40.45 C
ATOM 10 O3' G B 24 4.733 -4.185 -10.778 1.00 46.35 O
ATOM 11 C2' G B 24 2.769 -3.945 -12.240 1.00 39.36 C
ATOM 12 O2' G B 24 3.454 -2.813 -12.754 1.00 38.56 O
ATOM 13 C1' G B 24 2.308 -4.819 -13.423 1.00 38.84 C
ATOM 14 N9 G B 24 0.961 -5.387 -13.218 1.00 41.68 N
ATOM 15 C8 G B 24 0.648 -6.693 -12.897 1.00 44.13 C
ATOM 16 N7 G B 24 -0.638 -6.905 -12.786 1.00 48.86 N
ATOM 17 C5 G B 24 -1.208 -5.668 -13.055 1.00 50.96 C
ATOM 18 C6 G B 24 -2.571 -5.287 -13.080 1.00 47.23 C
ATOM 19 O6 G B 24 -3.546 -6.002 -12.853 1.00 46.87 O
ATOM 20 N1 G B 24 -2.727 -3.939 -13.395 1.00 43.60 N
ATOM 21 C2 G B 24 -1.693 -3.067 -13.656 1.00 47.13 C
ATOM 22 N2 G B 24 -2.041 -1.804 -13.945 1.00 46.12 N
ATOM 23 N3 G B 24 -0.405 -3.406 -13.635 1.00 47.27 N
ATOM 24 C4 G B 24 -0.240 -4.717 -13.332 1.00 48.33 C
ATOM 25 P G B 25 4.649 -4.055 -9.177 1.00 46.15 P
ATOM 26 OP1 G B 25 3.465 -4.831 -8.723 1.00 50.46 O
ATOM 27 OP2 G B 25 4.714 -2.607 -8.863 1.00 39.37 O
ATOM 28 O5' G B 25 5.984 -4.775 -8.683 1.00 54.44 O
TER
Atoms:
OP1: (3.465,-4.831,-8.723)
OP2: (4.714,-2.607,-8.863)
C3': (8.685,-5.893,-8.432)
C1': (9.067,-5.692,-10.725)
C5': (6.136,-6.189,-8.758)
O6: (9.797,0.136,-12.101)
O4': (7.759,-6.191,-10.570)
C8: (7.822,-3.493,-10.988)
C2: (12.051,-2.675,-11.815)
C6: (10.176,-1.036,-11.901)
C5: (9.387,-2.157,-11.532)
C4: (10.001,-3.390,-11.360)
P: (4.649,-4.055,-9.177)
C4': (7.540,-6.575,-9.183)
C2': (9.821,-5.984,-9.430)
O2': (10.324,-7.316,-9.492)
N1: (11.527,-1.405,-12.016)
N2: (13.378,-2.826,-11.986)
N3: (11.318,-3.728,-11.485)
N7: (8.026,-2.239,-11.284)
N9: (8.971,-4.243,-11.003)
O5': (5.984,-4.775,-8.683)
O3': (8.977,-6.477,-7.177)
OP2: (4.714,-2.607,-8.863)
C3': (8.685,-5.893,-8.432)
C1': (9.067,-5.692,-10.725)
C5': (6.136,-6.189,-8.758)
O6: (9.797,0.136,-12.101)
O4': (7.759,-6.191,-10.570)
C8: (7.822,-3.493,-10.988)
C2: (12.051,-2.675,-11.815)
C6: (10.176,-1.036,-11.901)
C5: (9.387,-2.157,-11.532)
C4: (10.001,-3.390,-11.360)
P: (4.649,-4.055,-9.177)
C4': (7.540,-6.575,-9.183)
C2': (9.821,-5.984,-9.430)
O2': (10.324,-7.316,-9.492)
N1: (11.527,-1.405,-12.016)
N2: (13.378,-2.826,-11.986)
N3: (11.318,-3.728,-11.485)
N7: (8.026,-2.239,-11.284)
N9: (8.971,-4.243,-11.003)
O5': (5.984,-4.775,-8.683)
O3': (8.977,-6.477,-7.177)
OP1: (5.547,-9.391,-10.164)
OP2: (3.152,-9.933,-10.859)
C3': (3.741,-4.874,-11.520)
C1': (2.308,-4.819,-13.423)
C5': (4.953,-6.986,-12.303)
O6: (-3.546,-6.002,-12.853)
O4': (3.229,-5.875,-13.565)
C8: (0.648,-6.693,-12.897)
C2: (-1.693,-3.067,-13.656)
C6: (-2.571,-5.287,-13.080)
C5: (-1.208,-5.668,-13.055)
C4: (-0.240,-4.717,-13.332)
P: (4.428,-9.234,-11.123)
C4': (4.335,-5.671,-12.665)
C2': (2.769,-3.945,-12.240)
O2': (3.454,-2.813,-12.754)
N1: (-2.727,-3.939,-13.395)
N2: (-2.041,-1.804,-13.945)
N3: (-0.405,-3.406,-13.635)
N7: (-0.638,-6.905,-12.786)
N9: (0.961,-5.387,-13.218)
O5': (4.158,-7.697,-11.378)
O3': (4.733,-4.185,-10.778)
OP2: (3.152,-9.933,-10.859)
C3': (3.741,-4.874,-11.520)
C1': (2.308,-4.819,-13.423)
C5': (4.953,-6.986,-12.303)
O6: (-3.546,-6.002,-12.853)
O4': (3.229,-5.875,-13.565)
C8: (0.648,-6.693,-12.897)
C2: (-1.693,-3.067,-13.656)
C6: (-2.571,-5.287,-13.080)
C5: (-1.208,-5.668,-13.055)
C4: (-0.240,-4.717,-13.332)
P: (4.428,-9.234,-11.123)
C4': (4.335,-5.671,-12.665)
C2': (2.769,-3.945,-12.240)
O2': (3.454,-2.813,-12.754)
N1: (-2.727,-3.939,-13.395)
N2: (-2.041,-1.804,-13.945)
N3: (-0.405,-3.406,-13.635)
N7: (-0.638,-6.905,-12.786)
N9: (0.961,-5.387,-13.218)
O5': (4.158,-7.697,-11.378)
O3': (4.733,-4.185,-10.778)
Image (generated by PyMOL):