ClaRNA

Doublet info:

Details

Nucleotide types: GG
Description: None: None
Program used: None
Has errors: False

Source

PDB id: 2OIU:Q1:Q0

Extra

PDB:
ATOM 1 O3' G A 0 -11.356 1.704 -44.023 1.00 70.78 O
ATOM 2 P G A 1 -10.620 1.685 -45.450 1.00 72.10 P
ATOM 3 OP1 G A 1 -10.203 3.066 -45.840 1.00 71.50 O
ATOM 4 OP2 G A 1 -11.552 1.008 -46.384 1.00 71.26 O
ATOM 5 O5' G A 1 -9.322 0.823 -45.108 1.00 69.85 O
ATOM 6 C5' G A 1 -8.370 1.433 -44.284 1.00 71.44 C
ATOM 7 C4' G A 1 -7.524 0.484 -43.454 1.00 72.89 C
ATOM 8 O4' G A 1 -8.104 0.415 -42.133 1.00 73.86 O
ATOM 9 C3' G A 1 -7.415 -0.949 -43.927 1.00 74.19 C
ATOM 10 O3' G A 1 -6.271 -1.130 -44.686 1.00 76.06 O
ATOM 11 C2' G A 1 -7.291 -1.717 -42.625 1.00 75.13 C
ATOM 12 O2' G A 1 -6.010 -1.662 -42.070 1.00 77.88 O
ATOM 13 C1' G A 1 -8.222 -0.933 -41.725 1.00 73.33 C
ATOM 14 N9 G A 1 -9.628 -1.361 -41.781 1.00 72.88 N
ATOM 15 C8 G A 1 -10.660 -0.702 -42.400 1.00 71.42 C
ATOM 16 N7 G A 1 -11.791 -1.323 -42.267 1.00 70.92 N
ATOM 17 C5 G A 1 -11.504 -2.463 -41.537 1.00 71.64 C
ATOM 18 C6 G A 1 -12.353 -3.501 -41.084 1.00 71.12 C
ATOM 19 O6 G A 1 -13.560 -3.622 -41.266 1.00 71.79 O
ATOM 20 N1 G A 1 -11.670 -4.477 -40.370 1.00 71.80 N
ATOM 21 C2 G A 1 -10.323 -4.451 -40.106 1.00 72.28 C
ATOM 22 N2 G A 1 -9.860 -5.488 -39.405 1.00 71.63 N
ATOM 23 N3 G A 1 -9.501 -3.468 -40.502 1.00 72.79 N
ATOM 24 C4 G A 1 -10.161 -2.509 -41.223 1.00 72.62 C
ATOM 25 P A A 2 -6.341 -2.055 -45.998 1.00 82.06 P
ATOM 26 OP1 A A 2 -4.937 -2.093 -46.504 1.00 81.87 O
ATOM 27 OP2 A A 2 -7.464 -1.716 -46.927 1.00 77.97 O
ATOM 28 O5' A A 2 -6.665 -3.498 -45.329 1.00 81.17 O
TER

ATOM 1 O3' U B 70 -15.581 6.458 -42.797 1.00 67.62 O
ATOM 2 P G B 0 -15.502 5.811 -44.251 1.00 68.62 P
ATOM 3 OP1 G B 0 -14.786 6.834 -45.051 1.00 69.33 O
ATOM 4 OP2 G B 0 -16.842 5.385 -44.691 1.00 71.25 O
ATOM 5 O5' G B 0 -14.642 4.517 -43.967 1.00 68.42 O
ATOM 6 C5' G B 0 -13.285 4.699 -43.670 1.00 69.99 C
ATOM 7 C4' G B 0 -12.751 3.434 -43.044 1.00 72.35 C
ATOM 8 O4' G B 0 -13.622 3.042 -41.942 1.00 73.35 O
ATOM 9 C3' G B 0 -12.663 2.273 -44.018 1.00 72.34 C
ATOM 10 O3' G B 0 -11.356 1.704 -44.023 1.00 70.78 O
ATOM 11 C2' G B 0 -13.786 1.365 -43.524 1.00 74.18 C
ATOM 12 O2' G B 0 -13.549 -0.016 -43.693 1.00 78.01 O
ATOM 13 C1' G B 0 -13.944 1.682 -42.044 1.00 75.05 C
ATOM 14 N9 G B 0 -15.338 1.419 -41.740 1.00 75.55 N
ATOM 15 C8 G B 0 -16.412 2.058 -42.300 1.00 75.58 C
ATOM 16 N7 G B 0 -17.558 1.604 -41.880 1.00 75.40 N
ATOM 17 C5 G B 0 -17.227 0.587 -41.017 1.00 75.89 C
ATOM 18 C6 G B 0 -18.073 -0.276 -40.289 1.00 75.64 C
ATOM 19 O6 G B 0 -19.306 -0.282 -40.256 1.00 76.49 O
ATOM 20 N1 G B 0 -17.360 -1.184 -39.517 1.00 75.68 N
ATOM 21 C2 G B 0 -15.994 -1.252 -39.475 1.00 75.55 C
ATOM 22 N2 G B 0 -15.515 -2.193 -38.674 1.00 75.26 N
ATOM 23 N3 G B 0 -15.169 -0.447 -40.154 1.00 76.92 N
ATOM 24 C4 G B 0 -15.858 0.452 -40.913 1.00 76.46 C
ATOM 25 P G B 1 -10.620 1.685 -45.450 1.00 72.10 P
ATOM 26 OP1 G B 1 -10.203 3.066 -45.840 1.00 71.50 O
ATOM 27 OP2 G B 1 -11.552 1.008 -46.384 1.00 71.26 O
ATOM 28 O5' G B 1 -9.322 0.823 -45.108 1.00 69.85 O
TER

Atoms:
OP1: (-10.203,3.066,-45.840)
OP2: (-11.552,1.008,-46.384)
C3': (-7.415,-0.949,-43.927)
C1': (-8.222,-0.933,-41.725)
C5': (-8.370,1.433,-44.284)
O6: (-13.560,-3.622,-41.266)
O4': (-8.104,0.415,-42.133)
C8: (-10.660,-0.702,-42.400)
C2: (-10.323,-4.451,-40.106)
C6: (-12.353,-3.501,-41.084)
C5: (-11.504,-2.463,-41.537)
C4: (-10.161,-2.509,-41.223)
P: (-10.620,1.685,-45.450)
C4': (-7.524,0.484,-43.454)
C2': (-7.291,-1.717,-42.625)
O2': (-6.010,-1.662,-42.070)
N1: (-11.670,-4.477,-40.370)
N2: (-9.860,-5.488,-39.405)
N3: (-9.501,-3.468,-40.502)
N7: (-11.791,-1.323,-42.267)
N9: (-9.628,-1.361,-41.781)
O5': (-9.322,0.823,-45.108)
O3': (-6.271,-1.130,-44.686)
OP1: (-14.786,6.834,-45.051)
OP2: (-16.842,5.385,-44.691)
C3': (-12.663,2.273,-44.018)
C1': (-13.944,1.682,-42.044)
C5': (-13.285,4.699,-43.670)
O6: (-19.306,-0.282,-40.256)
O4': (-13.622,3.042,-41.942)
C8: (-16.412,2.058,-42.300)
C2: (-15.994,-1.252,-39.475)
C6: (-18.073,-0.276,-40.289)
C5: (-17.227,0.587,-41.017)
C4: (-15.858,0.452,-40.913)
P: (-15.502,5.811,-44.251)
C4': (-12.751,3.434,-43.044)
C2': (-13.786,1.365,-43.524)
O2': (-13.549,-0.016,-43.693)
N1: (-17.360,-1.184,-39.517)
N2: (-15.515,-2.193,-38.674)
N3: (-15.169,-0.447,-40.154)
N7: (-17.558,1.604,-41.880)
N9: (-15.338,1.419,-41.740)
O5': (-14.642,4.517,-43.967)
O3': (-11.356,1.704,-44.023)
Image (generated by PyMOL):
PyMOL image
show in jmol