ClaRNA

Doublet info:

Details

Nucleotide types: GG
Description: None: None
Program used: None
Has errors: False

Source

PDB id: 3SLM:A12:A11

Extra

PDB:
ATOM 1 O3' G A 11 7.051 0.773 30.012 1.00 35.06 O
ATOM 2 P G A 12 6.035 -0.268 30.675 1.00 35.90 P
ATOM 3 OP1 G A 12 6.026 -1.466 29.827 1.00 40.43 O
ATOM 4 OP2 G A 12 4.767 0.454 30.897 1.00 34.78 O
ATOM 5 O5' G A 12 6.723 -0.597 32.065 1.00 38.02 O
ATOM 6 C5' G A 12 7.159 -1.906 32.375 1.00 33.33 C
ATOM 7 C4' G A 12 8.187 -1.872 33.468 1.00 31.39 C
ATOM 8 O4' G A 12 9.426 -1.337 32.940 1.00 27.08 O
ATOM 9 C3' G A 12 7.870 -0.949 34.635 1.00 26.27 C
ATOM 10 O3' G A 12 6.964 -1.505 35.570 1.00 23.13 O
ATOM 11 C2' G A 12 9.247 -0.664 35.208 1.00 25.61 C
ATOM 12 O2' G A 12 9.705 -1.767 35.966 1.00 27.48 O
ATOM 13 C1' G A 12 10.082 -0.584 33.937 1.00 27.27 C
ATOM 14 N9 G A 12 10.256 0.801 33.455 1.00 27.19 N
ATOM 15 C8 G A 12 9.765 1.338 32.294 1.00 32.32 C
ATOM 16 N7 G A 12 10.116 2.586 32.112 1.00 30.68 N
ATOM 17 C5 G A 12 10.894 2.887 33.213 1.00 25.45 C
ATOM 18 C6 G A 12 11.541 4.096 33.562 1.00 25.42 C
ATOM 19 O6 G A 12 11.565 5.171 32.950 1.00 25.54 O
ATOM 20 N1 G A 12 12.207 3.972 34.768 1.00 25.10 N
ATOM 21 C2 G A 12 12.252 2.828 35.522 1.00 27.49 C
ATOM 22 N2 G A 12 12.977 2.898 36.645 1.00 29.51 N
ATOM 23 N3 G A 12 11.640 1.701 35.211 1.00 24.71 N
ATOM 24 C4 G A 12 10.987 1.800 34.048 1.00 23.41 C
ATOM 25 P G A 13 5.817 -0.585 36.225 1.00 26.65 P
ATOM 26 OP1 G A 13 4.886 -1.483 36.947 1.00 24.54 O
ATOM 27 OP2 G A 13 5.272 0.276 35.138 1.00 26.19 O
ATOM 28 O5' G A 13 6.630 0.298 37.272 1.00 22.72 O
TER

ATOM 1 O3' A B 10 9.097 -2.270 27.293 1.00 30.92 O
ATOM 2 P G B 11 9.107 -1.817 25.749 1.00 33.88 P
ATOM 3 OP1 G B 11 8.045 -2.573 25.060 1.00 34.31 O
ATOM 4 OP2 G B 11 10.517 -1.952 25.263 1.00 35.57 O
ATOM 5 O5' G B 11 8.718 -0.282 25.817 1.00 35.65 O
ATOM 6 C5' G B 11 7.569 0.160 26.516 1.00 33.69 C
ATOM 7 C4' G B 11 7.949 0.870 27.786 1.00 34.26 C
ATOM 8 O4' G B 11 8.645 2.104 27.474 1.00 32.60 O
ATOM 9 C3' G B 11 6.790 1.242 28.700 1.00 35.23 C
ATOM 10 O3' G B 11 7.051 0.773 30.012 1.00 35.06 O
ATOM 11 C2' G B 11 6.771 2.772 28.689 1.00 31.53 C
ATOM 12 O2' G B 11 6.377 3.351 29.909 1.00 36.66 O
ATOM 13 C1' G B 11 8.207 3.117 28.352 1.00 32.69 C
ATOM 14 N9 G B 11 8.364 4.411 27.685 1.00 35.73 N
ATOM 15 C8 G B 11 7.830 4.780 26.477 1.00 35.31 C
ATOM 16 N7 G B 11 8.144 5.995 26.128 1.00 35.30 N
ATOM 17 C5 G B 11 8.930 6.462 27.171 1.00 35.58 C
ATOM 18 C6 G B 11 9.562 7.717 27.354 1.00 36.80 C
ATOM 19 O6 G B 11 9.535 8.686 26.589 1.00 40.95 O
ATOM 20 N1 G B 11 10.284 7.788 28.546 1.00 33.57 N
ATOM 21 C2 G B 11 10.370 6.767 29.457 1.00 30.20 C
ATOM 22 N2 G B 11 11.093 7.002 30.562 1.00 24.56 N
ATOM 23 N3 G B 11 9.782 5.591 29.296 1.00 35.75 N
ATOM 24 C4 G B 11 9.082 5.499 28.140 1.00 37.28 C
ATOM 25 P G B 12 6.035 -0.268 30.675 1.00 35.90 P
ATOM 26 OP1 G B 12 6.026 -1.466 29.827 1.00 40.43 O
ATOM 27 OP2 G B 12 4.767 0.454 30.897 1.00 34.78 O
ATOM 28 O5' G B 12 6.723 -0.597 32.065 1.00 38.02 O
TER

Atoms:
OP1: (6.026,-1.466,29.827)
OP2: (4.767,0.454,30.897)
C3': (7.870,-0.949,34.635)
C1': (10.082,-0.584,33.937)
C5': (7.159,-1.906,32.375)
O6: (11.565,5.171,32.950)
O4': (9.426,-1.337,32.940)
C8: (9.765,1.338,32.294)
C2: (12.252,2.828,35.522)
C6: (11.541,4.096,33.562)
C5: (10.894,2.887,33.213)
C4: (10.987,1.800,34.048)
P: (6.035,-0.268,30.675)
C4': (8.187,-1.872,33.468)
C2': (9.247,-0.664,35.208)
O2': (9.705,-1.767,35.966)
N1: (12.207,3.972,34.768)
N2: (12.977,2.898,36.645)
N3: (11.640,1.701,35.211)
N7: (10.116,2.586,32.112)
N9: (10.256,0.801,33.455)
O5': (6.723,-0.597,32.065)
O3': (6.964,-1.505,35.570)
OP1: (8.045,-2.573,25.060)
OP2: (10.517,-1.952,25.263)
C3': (6.790,1.242,28.700)
C1': (8.207,3.117,28.352)
C5': (7.569,0.160,26.516)
O6: (9.535,8.686,26.589)
O4': (8.645,2.104,27.474)
C8: (7.830,4.780,26.477)
C2: (10.370,6.767,29.457)
C6: (9.562,7.717,27.354)
C5: (8.930,6.462,27.171)
C4: (9.082,5.499,28.140)
P: (9.107,-1.817,25.749)
C4': (7.949,0.870,27.786)
C2': (6.771,2.772,28.689)
O2': (6.377,3.351,29.909)
N1: (10.284,7.788,28.546)
N2: (11.093,7.002,30.562)
N3: (9.782,5.591,29.296)
N7: (8.144,5.995,26.128)
N9: (8.364,4.411,27.685)
O5': (8.718,-0.282,25.817)
O3': (7.051,0.773,30.012)
Image (generated by PyMOL):
PyMOL image
show in jmol