ClaRNA

Doublet info:

Details

Nucleotide types: GG
Description: None: None
Program used: None
Has errors: False

Source

PDB id: 1M5V:E73:E72

Extra

PDB:
ATOM 1 O3' G A 72 -39.861 18.750 128.540 1.00199.55 O
ATOM 2 P G A 73 -40.720 17.682 129.377 1.00199.88 P
ATOM 3 OP1 G A 73 -42.160 17.963 129.154 1.00201.04 O
ATOM 4 OP2 G A 73 -40.179 17.673 130.760 1.00198.69 O
ATOM 5 O5' G A 73 -40.368 16.284 128.695 1.00200.10 O
ATOM 6 C5' G A 73 -40.762 16.001 127.353 1.00200.37 C
ATOM 7 C4' G A 73 -40.271 14.631 126.942 1.00200.96 C
ATOM 8 O4' G A 73 -38.817 14.623 126.960 1.00201.04 O
ATOM 9 C3' G A 73 -40.670 13.498 127.875 1.00201.04 C
ATOM 10 O3' G A 73 -41.960 12.980 127.561 1.00201.04 O
ATOM 11 C2' G A 73 -39.566 12.481 127.624 1.00200.73 C
ATOM 12 O2' G A 73 -39.743 11.756 126.424 1.00198.30 O
ATOM 13 C1' G A 73 -38.350 13.400 127.507 1.00201.04 C
ATOM 14 N9 G A 73 -37.751 13.694 128.806 1.00201.04 N
ATOM 15 C8 G A 73 -37.538 14.935 129.354 1.00201.02 C
ATOM 16 N7 G A 73 -36.995 14.887 130.540 1.00200.64 N
ATOM 17 C5 G A 73 -36.838 13.532 130.791 1.00200.46 C
ATOM 18 C6 G A 73 -36.302 12.864 131.920 1.00200.13 C
ATOM 19 O6 G A 73 -35.843 13.355 132.959 1.00199.44 O
ATOM 20 N1 G A 73 -36.332 11.483 131.758 1.00200.46 N
ATOM 21 C2 G A 73 -36.816 10.827 130.653 1.00200.68 C
ATOM 22 N2 G A 73 -36.758 9.487 130.688 1.00200.84 N
ATOM 23 N3 G A 73 -37.318 11.437 129.593 1.00200.69 N
ATOM 24 C4 G A 73 -37.298 12.780 129.729 1.00200.78 C
ATOM 25 P G A 74 -43.064 12.830 128.724 1.00201.04 P
ATOM 26 OP1 G A 74 -44.377 12.565 128.084 1.00201.00 O
ATOM 27 OP2 G A 74 -42.912 13.996 129.632 1.00199.48 O
ATOM 28 O5' G A 74 -42.630 11.523 129.528 1.00201.03 O
TER

ATOM 1 O3' G B 71 -35.946 22.952 130.721 1.00182.20 O
ATOM 2 P G B 72 -37.095 22.232 131.585 1.00185.76 P
ATOM 3 OP1 G B 72 -38.190 23.208 131.810 1.00186.82 O
ATOM 4 OP2 G B 72 -36.436 21.587 132.750 1.00185.47 O
ATOM 5 O5' G B 72 -37.637 21.085 130.622 1.00188.88 O
ATOM 6 C5' G B 72 -38.210 21.407 129.359 1.00193.87 C
ATOM 7 C4' G B 72 -37.980 20.282 128.381 1.00197.15 C
ATOM 8 O4' G B 72 -36.550 20.092 128.204 1.00198.61 O
ATOM 9 C3' G B 72 -38.480 18.919 128.830 1.00198.96 C
ATOM 10 O3' G B 72 -39.861 18.750 128.540 1.00199.55 O
ATOM 11 C2' G B 72 -37.605 17.981 128.014 1.00199.93 C
ATOM 12 O2' G B 72 -38.025 17.866 126.669 1.00200.46 O
ATOM 13 C1' G B 72 -36.262 18.708 128.078 1.00199.75 C
ATOM 14 N9 G B 72 -35.474 18.302 129.238 1.00200.16 N
ATOM 15 C8 G B 72 -35.259 19.019 130.390 1.00200.06 C
ATOM 16 N7 G B 72 -34.516 18.388 131.257 1.00200.13 N
ATOM 17 C5 G B 72 -34.220 17.180 130.639 1.00200.44 C
ATOM 18 C6 G B 72 -33.448 16.080 131.094 1.00200.64 C
ATOM 19 O6 G B 72 -32.849 15.948 132.170 1.00200.33 O
ATOM 20 N1 G B 72 -33.408 15.060 130.149 1.00201.04 N
ATOM 21 C2 G B 72 -34.030 15.092 128.924 1.00201.04 C
ATOM 22 N2 G B 72 -33.876 14.009 128.151 1.00201.03 N
ATOM 23 N3 G B 72 -34.752 16.111 128.489 1.00200.73 N
ATOM 24 C4 G B 72 -34.804 17.113 129.391 1.00200.43 C
ATOM 25 P G B 73 -40.720 17.682 129.377 1.00199.88 P
ATOM 26 OP1 G B 73 -42.160 17.963 129.154 1.00201.04 O
ATOM 27 OP2 G B 73 -40.179 17.673 130.760 1.00198.69 O
ATOM 28 O5' G B 73 -40.368 16.284 128.695 1.00200.10 O
TER

Atoms:
OP1: (-42.160,17.963,129.154)
OP2: (-40.179,17.673,130.760)
C3': (-40.670,13.498,127.875)
C1': (-38.350,13.400,127.507)
C5': (-40.762,16.001,127.353)
O6: (-35.843,13.355,132.959)
O4': (-38.817,14.623,126.960)
C8: (-37.538,14.935,129.354)
C2: (-36.816,10.827,130.653)
C6: (-36.302,12.864,131.920)
C5: (-36.838,13.532,130.791)
C4: (-37.298,12.780,129.729)
P: (-40.720,17.682,129.377)
C4': (-40.271,14.631,126.942)
C2': (-39.566,12.481,127.624)
O2': (-39.743,11.756,126.424)
N1: (-36.332,11.483,131.758)
N2: (-36.758,9.487,130.688)
N3: (-37.318,11.437,129.593)
N7: (-36.995,14.887,130.540)
N9: (-37.751,13.694,128.806)
O5': (-40.368,16.284,128.695)
O3': (-41.960,12.980,127.561)
OP1: (-38.190,23.208,131.810)
OP2: (-36.436,21.587,132.750)
C3': (-38.480,18.919,128.830)
C1': (-36.262,18.708,128.078)
C5': (-38.210,21.407,129.359)
O6: (-32.849,15.948,132.170)
O4': (-36.550,20.092,128.204)
C8: (-35.259,19.019,130.390)
C2: (-34.030,15.092,128.924)
C6: (-33.448,16.080,131.094)
C5: (-34.220,17.180,130.639)
C4: (-34.804,17.113,129.391)
P: (-37.095,22.232,131.585)
C4': (-37.980,20.282,128.381)
C2': (-37.605,17.981,128.014)
O2': (-38.025,17.866,126.669)
N1: (-33.408,15.060,130.149)
N2: (-33.876,14.009,128.151)
N3: (-34.752,16.111,128.489)
N7: (-34.516,18.388,131.257)
N9: (-35.474,18.302,129.238)
O5': (-37.637,21.085,130.622)
O3': (-39.861,18.750,128.540)
Image (generated by PyMOL):
PyMOL image
show in jmol