ClaRNA

Doublet info:

Details

Nucleotide types: GG
Description: None: None
Program used: None
Has errors: False

Source

PDB id: 3KNH:A889:A888

Extra

PDB:
ATOM 1 O3' G A 888 104.461 35.894 -1.028 1.00 68.75 O
ATOM 2 P G A 889 104.649 36.538 -2.500 1.00 65.29 P
ATOM 3 OP1 G A 889 106.100 36.527 -2.868 1.00 46.99 O
ATOM 4 OP2 G A 889 103.875 37.807 -2.598 1.00 61.18 O
ATOM 5 O5' G A 889 103.913 35.464 -3.417 1.00 76.84 O
ATOM 6 C5' G A 889 103.431 35.790 -4.716 1.00 76.84 C
ATOM 7 C4' G A 889 102.861 34.555 -5.380 1.00 72.17 C
ATOM 8 O4' G A 889 103.846 33.498 -5.270 1.00 69.13 O
ATOM 9 C3' G A 889 101.602 33.970 -4.754 1.00 69.59 C
ATOM 10 O3' G A 889 100.417 34.558 -5.271 1.00 73.99 O
ATOM 11 C2' G A 889 101.693 32.512 -5.165 1.00 73.63 C
ATOM 12 O2' G A 889 101.261 32.333 -6.501 1.00 71.62 O
ATOM 13 C1' G A 889 103.198 32.264 -5.070 1.00 73.42 C
ATOM 14 N9 G A 889 103.568 31.758 -3.752 1.00 71.77 N
ATOM 15 C8 G A 889 103.838 32.488 -2.618 1.00 70.06 C
ATOM 16 N7 G A 889 104.099 31.743 -1.581 1.00 66.79 N
ATOM 17 C5 G A 889 104.008 30.443 -2.061 1.00 65.55 C
ATOM 18 C6 G A 889 104.185 29.192 -1.397 1.00 69.33 C
ATOM 19 O6 G A 889 104.467 28.977 -0.200 1.00 66.43 O
ATOM 20 N1 G A 889 103.995 28.119 -2.269 1.00 68.75 N
ATOM 21 C2 G A 889 103.668 28.231 -3.597 1.00 66.54 C
ATOM 22 N2 G A 889 103.506 27.081 -4.269 1.00 72.90 N
ATOM 23 N3 G A 889 103.505 29.383 -4.221 1.00 63.04 N
ATOM 24 C4 G A 889 103.688 30.438 -3.400 1.00 63.97 C
ATOM 25 P G A 890 99.568 35.572 -4.360 1.00 79.81 P
ATOM 26 OP1 G A 890 99.525 35.081 -2.963 1.00 81.62 O
ATOM 27 OP2 G A 890 98.303 35.856 -5.077 1.00 85.15 O
ATOM 28 O5' G A 890 100.447 36.900 -4.369 1.00 74.04 O
TER

ATOM 1 O3' C B 887 106.565 36.875 4.573 1.00 67.87 O
ATOM 2 P G B 888 106.563 37.156 2.990 1.00 71.46 P
ATOM 3 OP1 G B 888 107.472 36.164 2.350 1.00 67.97 O
ATOM 4 OP2 G B 888 106.799 38.607 2.792 1.00 64.57 O
ATOM 5 O5' G B 888 105.060 36.859 2.551 1.00 75.81 O
ATOM 6 C5' G B 888 104.648 35.552 2.154 1.00 73.16 C
ATOM 7 C4' G B 888 103.502 35.650 1.180 1.00 73.69 C
ATOM 8 O4' G B 888 102.346 36.174 1.881 1.00 77.65 O
ATOM 9 C3' G B 888 103.729 36.587 0.002 1.00 74.48 C
ATOM 10 O3' G B 888 104.461 35.894 -1.028 1.00 68.75 O
ATOM 11 C2' G B 888 102.305 37.042 -0.340 1.00 79.08 C
ATOM 12 O2' G B 888 101.579 36.169 -1.181 1.00 79.80 O
ATOM 13 C1' G B 888 101.634 37.058 1.042 1.00 79.04 C
ATOM 14 N9 G B 888 101.608 38.370 1.693 1.00 78.50 N
ATOM 15 C8 G B 888 102.644 38.992 2.356 1.00 78.11 C
ATOM 16 N7 G B 888 102.323 40.168 2.826 1.00 79.69 N
ATOM 17 C5 G B 888 100.994 40.337 2.455 1.00 81.04 C
ATOM 18 C6 G B 888 100.099 41.433 2.671 1.00 80.42 C
ATOM 19 O6 G B 888 100.317 42.508 3.246 1.00 78.39 O
ATOM 20 N1 G B 888 98.842 41.180 2.128 1.00 76.62 N
ATOM 21 C2 G B 888 98.485 40.030 1.460 1.00 76.69 C
ATOM 22 N2 G B 888 97.222 39.968 1.023 1.00 78.28 N
ATOM 23 N3 G B 888 99.305 39.013 1.239 1.00 76.40 N
ATOM 24 C4 G B 888 100.535 39.231 1.761 1.00 79.98 C
ATOM 25 P G B 889 104.649 36.538 -2.500 1.00 65.29 P
ATOM 26 OP1 G B 889 106.100 36.527 -2.868 1.00 46.99 O
ATOM 27 OP2 G B 889 103.875 37.807 -2.598 1.00 61.18 O
ATOM 28 O5' G B 889 103.913 35.464 -3.417 1.00 76.84 O
TER

Atoms:
OP1: (106.100,36.527,-2.868)
OP2: (103.875,37.807,-2.598)
C3': (101.602,33.970,-4.754)
C1': (103.198,32.264,-5.070)
C5': (103.431,35.790,-4.716)
O6: (104.467,28.977,-0.200)
O4': (103.846,33.498,-5.270)
C8: (103.838,32.488,-2.618)
C2: (103.668,28.231,-3.597)
C6: (104.185,29.192,-1.397)
C5: (104.008,30.443,-2.061)
C4: (103.688,30.438,-3.400)
P: (104.649,36.538,-2.500)
C4': (102.861,34.555,-5.380)
C2': (101.693,32.512,-5.165)
O2': (101.261,32.333,-6.501)
N1: (103.995,28.119,-2.269)
N2: (103.506,27.081,-4.269)
N3: (103.505,29.383,-4.221)
N7: (104.099,31.743,-1.581)
N9: (103.568,31.758,-3.752)
O5': (103.913,35.464,-3.417)
O3': (100.417,34.558,-5.271)
OP1: (107.472,36.164,2.350)
OP2: (106.799,38.607,2.792)
C3': (103.729,36.587,0.002)
C1': (101.634,37.058,1.042)
C5': (104.648,35.552,2.154)
O6: (100.317,42.508,3.246)
O4': (102.346,36.174,1.881)
C8: (102.644,38.992,2.356)
C2: (98.485,40.030,1.460)
C6: (100.099,41.433,2.671)
C5: (100.994,40.337,2.455)
C4: (100.535,39.231,1.761)
P: (106.563,37.156,2.990)
C4': (103.502,35.650,1.180)
C2': (102.305,37.042,-0.340)
O2': (101.579,36.169,-1.181)
N1: (98.842,41.180,2.128)
N2: (97.222,39.968,1.023)
N3: (99.305,39.013,1.239)
N7: (102.323,40.168,2.826)
N9: (101.608,38.370,1.693)
O5': (105.060,36.859,2.551)
O3': (104.461,35.894,-1.028)
Image (generated by PyMOL):
PyMOL image
show in jmol