ClaRNA

Doublet info:

Details

Nucleotide types: GG
Description: None: None
Program used: None
Has errors: False

Source

PDB id: 3R8O:A556:A555

Extra

PDB:
ATOM 1 O3' G A 555 -26.294 64.185 77.750 1.00 11.22 O
ATOM 2 P G A 556 -25.779 65.674 77.417 1.00 2.85 P
ATOM 3 OP1 G A 556 -24.906 65.581 76.227 1.00 2.85 O
ATOM 4 OP2 G A 556 -25.219 66.229 78.653 1.00 2.85 O
ATOM 5 O5' G A 556 -27.118 66.457 77.027 1.00 2.85 O
ATOM 6 C5' G A 556 -27.403 66.802 75.671 1.00 2.85 C
ATOM 7 C4' G A 556 -28.706 66.212 75.264 1.00 2.85 C
ATOM 8 O4' G A 556 -29.005 65.143 76.190 1.00 2.85 O
ATOM 9 C3' G A 556 -29.915 67.144 75.360 1.00 2.85 C
ATOM 10 O3' G A 556 -30.164 67.880 74.181 1.00 2.85 O
ATOM 11 C2' G A 556 -31.035 66.199 75.705 1.00 2.85 C
ATOM 12 O2' G A 556 -31.435 65.453 74.562 1.00 2.85 O
ATOM 13 C1' G A 556 -30.321 65.270 76.654 1.00 2.85 C
ATOM 14 N9 G A 556 -30.287 65.813 78.027 1.00 3.04 N
ATOM 15 C8 G A 556 -29.180 66.170 78.759 1.00 3.04 C
ATOM 16 N7 G A 556 -29.476 66.601 79.956 1.00 3.04 N
ATOM 17 C5 G A 556 -30.869 66.531 80.042 1.00 3.04 C
ATOM 18 C6 G A 556 -31.783 66.867 81.098 1.00 3.04 C
ATOM 19 O6 G A 556 -31.566 67.316 82.250 1.00 3.04 O
ATOM 20 N1 G A 556 -33.111 66.636 80.736 1.00 3.04 N
ATOM 21 C2 G A 556 -33.535 66.152 79.549 1.00 3.04 C
ATOM 22 N2 G A 556 -34.856 66.013 79.474 1.00 3.04 N
ATOM 23 N3 G A 556 -32.720 65.845 78.556 1.00 3.04 N
ATOM 24 C4 G A 556 -31.397 66.048 78.852 1.00 3.04 C
ATOM 25 P A A 557 -29.072 68.908 73.627 1.00 9.62 P
ATOM 26 OP1 A A 557 -29.804 69.942 72.852 1.00 9.62 O
ATOM 27 OP2 A A 557 -28.025 68.105 72.931 1.00 9.62 O
ATOM 28 O5' A A 557 -28.468 69.540 74.978 1.00 9.62 O
TER

ATOM 1 O3' C B 554 -24.272 64.148 83.910 1.00 9.81 O
ATOM 2 P G B 555 -24.762 65.370 82.989 1.00 11.22 P
ATOM 3 OP1 G B 555 -23.566 65.925 82.314 1.00 11.22 O
ATOM 4 OP2 G B 555 -25.567 66.250 83.837 1.00 11.22 O
ATOM 5 O5' G B 555 -25.693 64.656 81.929 1.00 11.22 O
ATOM 6 C5' G B 555 -25.139 64.117 80.741 1.00 11.22 C
ATOM 7 C4' G B 555 -26.126 63.244 80.014 1.00 11.22 C
ATOM 8 O4' G B 555 -27.111 62.733 80.945 1.00 11.22 O
ATOM 9 C3' G B 555 -26.984 63.917 78.959 1.00 11.22 C
ATOM 10 O3' G B 555 -26.294 64.185 77.750 1.00 11.22 O
ATOM 11 C2' G B 555 -28.124 62.910 78.814 1.00 11.22 C
ATOM 12 O2' G B 555 -27.690 61.760 78.109 1.00 11.22 O
ATOM 13 C1' G B 555 -28.316 62.479 80.247 1.00 11.22 C
ATOM 14 N9 G B 555 -29.453 63.123 80.936 1.00 11.75 N
ATOM 15 C8 G B 555 -29.371 63.729 82.162 1.00 11.75 C
ATOM 16 N7 G B 555 -30.530 64.094 82.637 1.00 11.75 N
ATOM 17 C5 G B 555 -31.450 63.660 81.692 1.00 11.75 C
ATOM 18 C6 G B 555 -32.877 63.780 81.689 1.00 11.75 C
ATOM 19 O6 G B 555 -33.599 64.310 82.551 1.00 11.75 O
ATOM 20 N1 G B 555 -33.453 63.208 80.563 1.00 11.75 N
ATOM 21 C2 G B 555 -32.711 62.608 79.580 1.00 11.75 C
ATOM 22 N2 G B 555 -33.418 62.123 78.552 1.00 11.75 N
ATOM 23 N3 G B 555 -31.379 62.492 79.569 1.00 11.75 N
ATOM 24 C4 G B 555 -30.802 63.037 80.652 1.00 11.75 C
ATOM 25 P G B 556 -25.779 65.674 77.417 1.00 2.85 P
ATOM 26 OP1 G B 556 -24.906 65.581 76.227 1.00 2.85 O
ATOM 27 OP2 G B 556 -25.219 66.229 78.653 1.00 2.85 O
ATOM 28 O5' G B 556 -27.118 66.457 77.027 1.00 2.85 O
TER

Atoms:
OP1: (-24.906,65.581,76.227)
OP2: (-25.219,66.229,78.653)
C3': (-29.915,67.144,75.360)
C1': (-30.321,65.270,76.654)
C5': (-27.403,66.802,75.671)
O6: (-31.566,67.316,82.250)
O4': (-29.005,65.143,76.190)
C8: (-29.180,66.170,78.759)
C2: (-33.535,66.152,79.549)
C6: (-31.783,66.867,81.098)
C5: (-30.869,66.531,80.042)
C4: (-31.397,66.048,78.852)
P: (-25.779,65.674,77.417)
C4': (-28.706,66.212,75.264)
C2': (-31.035,66.199,75.705)
O2': (-31.435,65.453,74.562)
N1: (-33.111,66.636,80.736)
N2: (-34.856,66.013,79.474)
N3: (-32.720,65.845,78.556)
N7: (-29.476,66.601,79.956)
N9: (-30.287,65.813,78.027)
O5': (-27.118,66.457,77.027)
O3': (-30.164,67.880,74.181)
OP1: (-23.566,65.925,82.314)
OP2: (-25.567,66.250,83.837)
C3': (-26.984,63.917,78.959)
C1': (-28.316,62.479,80.247)
C5': (-25.139,64.117,80.741)
O6: (-33.599,64.310,82.551)
O4': (-27.111,62.733,80.945)
C8: (-29.371,63.729,82.162)
C2: (-32.711,62.608,79.580)
C6: (-32.877,63.780,81.689)
C5: (-31.450,63.660,81.692)
C4: (-30.802,63.037,80.652)
P: (-24.762,65.370,82.989)
C4': (-26.126,63.244,80.014)
C2': (-28.124,62.910,78.814)
O2': (-27.690,61.760,78.109)
N1: (-33.453,63.208,80.563)
N2: (-33.418,62.123,78.552)
N3: (-31.379,62.492,79.569)
N7: (-30.530,64.094,82.637)
N9: (-29.453,63.123,80.936)
O5': (-25.693,64.656,81.929)
O3': (-26.294,64.185,77.750)
Image (generated by PyMOL):
PyMOL image
show in jmol