ClaRNA

Doublet info:

Details

Nucleotide types: GG
Description: None: None
Program used: None
Has errors: False

Source

PDB id: 3AKZ:F46:F6

Extra

PDB:
ATOM 1 O3' U A 45 18.818 48.384 83.471 1.00 42.58 O
ATOM 2 P G A 46 17.994 47.647 84.640 1.00 40.81 P
ATOM 3 OP1 G A 46 18.313 48.335 85.917 1.00 41.47 O
ATOM 4 OP2 G A 46 18.215 46.183 84.524 1.00 41.56 O
ATOM 5 O5' G A 46 16.471 47.952 84.291 1.00 37.97 O
ATOM 6 C5' G A 46 16.009 47.938 82.942 1.00 36.64 C
ATOM 7 C4' G A 46 14.596 48.463 82.879 1.00 35.91 C
ATOM 8 O4' G A 46 13.701 47.524 83.531 1.00 36.73 O
ATOM 9 C3' G A 46 14.387 49.774 83.617 1.00 36.81 C
ATOM 10 O3' G A 46 14.712 50.880 82.781 1.00 36.74 O
ATOM 11 C2' G A 46 12.908 49.713 83.975 1.00 36.88 C
ATOM 12 O2' G A 46 12.059 50.057 82.899 1.00 36.81 O
ATOM 13 C1' G A 46 12.744 48.228 84.304 1.00 36.11 C
ATOM 14 N9 G A 46 12.990 47.917 85.708 1.00 36.59 N
ATOM 15 C8 G A 46 13.998 47.133 86.214 1.00 36.64 C
ATOM 16 N7 G A 46 13.970 47.036 87.514 1.00 36.37 N
ATOM 17 C5 G A 46 12.875 47.801 87.892 1.00 36.96 C
ATOM 18 C6 G A 46 12.345 48.072 89.180 1.00 37.96 C
ATOM 19 O6 G A 46 12.752 47.677 90.281 1.00 36.59 O
ATOM 20 N1 G A 46 11.226 48.896 89.107 1.00 39.83 N
ATOM 21 C2 G A 46 10.685 49.395 87.946 1.00 39.68 C
ATOM 22 N2 G A 46 9.601 50.171 88.083 1.00 38.89 N
ATOM 23 N3 G A 46 11.171 49.150 86.740 1.00 38.98 N
ATOM 24 C4 G A 46 12.258 48.351 86.788 1.00 37.29 C
ATOM 25 P G A 47 15.428 52.170 83.415 1.00 33.23 P
ATOM 26 OP1 G A 47 15.766 53.088 82.300 1.00 34.82 O
ATOM 27 OP2 G A 47 16.495 51.715 84.341 1.00 34.62 O
ATOM 28 O5' G A 47 14.275 52.849 84.274 1.00 32.65 O
TER

ATOM 1 O3' G B 5 17.687 37.848 87.377 1.00 32.93 O
ATOM 2 P G B 6 18.254 39.343 87.207 1.00 31.44 P
ATOM 3 OP1 G B 6 19.736 39.294 87.154 1.00 31.67 O
ATOM 4 OP2 G B 6 17.583 40.188 88.229 1.00 26.81 O
ATOM 5 O5' G B 6 17.710 39.777 85.775 1.00 34.22 O
ATOM 6 C5' G B 6 17.935 41.085 85.267 1.00 35.19 C
ATOM 7 C4' G B 6 16.798 41.491 84.363 1.00 32.86 C
ATOM 8 O4' G B 6 15.549 41.375 85.094 1.00 32.00 O
ATOM 9 C3' G B 6 16.873 42.917 83.833 1.00 32.77 C
ATOM 10 O3' G B 6 16.351 42.924 82.512 1.00 34.36 O
ATOM 11 C2' G B 6 15.935 43.676 84.770 1.00 32.84 C
ATOM 12 O2' G B 6 15.357 44.819 84.175 1.00 32.01 O
ATOM 13 C1' G B 6 14.880 42.617 85.092 1.00 32.21 C
ATOM 14 N9 G B 6 14.264 42.782 86.405 1.00 30.48 N
ATOM 15 C8 G B 6 14.725 42.253 87.587 1.00 29.81 C
ATOM 16 N7 G B 6 13.983 42.564 88.613 1.00 29.61 N
ATOM 17 C5 G B 6 12.967 43.345 88.081 1.00 28.43 C
ATOM 18 C6 G B 6 11.865 43.971 88.718 1.00 26.77 C
ATOM 19 O6 G B 6 11.559 43.959 89.917 1.00 24.85 O
ATOM 20 N1 G B 6 11.077 44.668 87.809 1.00 24.92 N
ATOM 21 C2 G B 6 11.317 44.755 86.462 1.00 25.49 C
ATOM 22 N2 G B 6 10.435 45.482 85.760 1.00 25.07 N
ATOM 23 N3 G B 6 12.342 44.176 85.851 1.00 27.80 N
ATOM 24 C4 G B 6 13.122 43.491 86.718 1.00 29.02 C
ATOM 25 P U B 7 17.343 42.683 81.269 1.00 35.13 P
ATOM 26 OP1 U B 7 16.615 42.978 80.007 1.00 35.68 O
ATOM 27 OP2 U B 7 17.960 41.347 81.464 1.00 35.51 O
ATOM 28 O5' U B 7 18.481 43.780 81.466 1.00 34.42 O
TER

Atoms:
OP1: (18.313,48.335,85.917)
OP2: (18.215,46.183,84.524)
C3': (14.387,49.774,83.617)
C1': (12.744,48.228,84.304)
C5': (16.009,47.938,82.942)
O6: (12.752,47.677,90.281)
O4': (13.701,47.524,83.531)
C8: (13.998,47.133,86.214)
C2: (10.685,49.395,87.946)
C6: (12.345,48.072,89.180)
C5: (12.875,47.801,87.892)
C4: (12.258,48.351,86.788)
P: (17.994,47.647,84.640)
C4': (14.596,48.463,82.879)
C2': (12.908,49.713,83.975)
O2': (12.059,50.057,82.899)
N1: (11.226,48.896,89.107)
N2: (9.601,50.171,88.083)
N3: (11.171,49.150,86.740)
N7: (13.970,47.036,87.514)
N9: (12.990,47.917,85.708)
O5': (16.471,47.952,84.291)
O3': (14.712,50.880,82.781)
OP1: (19.736,39.294,87.154)
OP2: (17.583,40.188,88.229)
C3': (16.873,42.917,83.833)
C1': (14.880,42.617,85.092)
C5': (17.935,41.085,85.267)
O6: (11.559,43.959,89.917)
O4': (15.549,41.375,85.094)
C8: (14.725,42.253,87.587)
C2: (11.317,44.755,86.462)
C6: (11.865,43.971,88.718)
C5: (12.967,43.345,88.081)
C4: (13.122,43.491,86.718)
P: (18.254,39.343,87.207)
C4': (16.798,41.491,84.363)
C2': (15.935,43.676,84.770)
O2': (15.357,44.819,84.175)
N1: (11.077,44.668,87.809)
N2: (10.435,45.482,85.760)
N3: (12.342,44.176,85.851)
N7: (13.983,42.564,88.613)
N9: (14.264,42.782,86.405)
O5': (17.710,39.777,85.775)
O3': (16.351,42.924,82.512)
Image (generated by PyMOL):
PyMOL image
show in jmol