Doublet info:
Details
Nucleotide types:
GG
Description:
None: None
Program used:
None
Has errors:
False
Source
PDB id:
3HHN:E87:E120
Extra
PDB:
ATOM 1 O3' A A 86 53.319 5.631 -21.050 1.00 69.24 O
ATOM 2 P G A 87 52.205 5.136 -22.089 1.00 67.99 P
ATOM 3 OP1 G A 87 52.726 5.308 -23.462 1.00 63.06 O
ATOM 4 OP2 G A 87 50.920 5.762 -21.715 1.00 73.15 O
ATOM 5 O5' G A 87 52.129 3.567 -21.779 1.00 69.51 O
ATOM 6 C5' G A 87 52.987 2.636 -22.444 1.00 68.74 C
ATOM 7 C4' G A 87 54.458 2.955 -22.238 1.00 54.98 C
ATOM 8 O4' G A 87 54.801 2.834 -20.835 1.00 57.67 O
ATOM 9 C3' G A 87 55.439 2.001 -22.904 1.00 52.12 C
ATOM 10 O3' G A 87 55.576 2.269 -24.291 1.00 54.47 O
ATOM 11 C2' G A 87 56.701 2.382 -22.148 1.00 52.51 C
ATOM 12 O2' G A 87 57.180 3.654 -22.539 1.00 56.09 O
ATOM 13 C1' G A 87 56.153 2.421 -20.725 1.00 53.21 C
ATOM 14 N9 G A 87 56.206 1.110 -20.088 1.00 38.37 N
ATOM 15 C8 G A 87 55.148 0.318 -19.716 1.00 44.46 C
ATOM 16 N7 G A 87 55.511 -0.813 -19.174 1.00 42.67 N
ATOM 17 C5 G A 87 56.900 -0.769 -19.194 1.00 34.15 C
ATOM 18 C6 G A 87 57.849 -1.716 -18.743 1.00 37.05 C
ATOM 19 O6 G A 87 57.646 -2.817 -18.216 1.00 43.41 O
ATOM 20 N1 G A 87 59.153 -1.279 -18.949 1.00 34.91 N
ATOM 21 C2 G A 87 59.494 -0.080 -19.522 1.00 42.65 C
ATOM 22 N2 G A 87 60.807 0.165 -19.636 1.00 43.10 N
ATOM 23 N3 G A 87 58.615 0.817 -19.951 1.00 40.09 N
ATOM 24 C4 G A 87 57.341 0.407 -19.754 1.00 34.08 C
ATOM 25 P A A 88 55.897 1.063 -25.293 1.00 51.88 P
ATOM 26 OP1 A A 88 55.878 1.612 -26.666 1.00 45.42 O
ATOM 27 OP2 A A 88 55.030 -0.081 -24.934 1.00 43.84 O
ATOM 28 O5' A A 88 57.409 0.685 -24.942 1.00 47.16 O
TER
ATOM 1 O3' C B 119 47.809 -2.981 -14.870 1.00 64.60 O
ATOM 2 P G B 120 47.974 -2.669 -16.430 1.00 71.98 P
ATOM 3 OP1 G B 120 46.630 -2.360 -16.973 1.00 61.48 O
ATOM 4 OP2 G B 120 48.790 -3.750 -17.030 1.00 51.64 O
ATOM 5 O5' G B 120 48.843 -1.327 -16.426 1.00 58.34 O
ATOM 6 C5' G B 120 48.274 -0.122 -15.937 1.00 51.60 C
ATOM 7 C4' G B 120 49.170 1.054 -16.269 1.00 56.44 C
ATOM 8 O4' G B 120 50.475 0.810 -15.688 1.00 62.43 O
ATOM 9 C3' G B 120 49.429 1.273 -17.756 1.00 63.33 C
ATOM 10 O3' G B 120 49.748 2.630 -18.014 1.00 62.83 O
ATOM 11 C2' G B 120 50.667 0.418 -17.977 1.00 63.83 C
ATOM 12 O2' G B 120 51.397 0.794 -19.128 1.00 61.91 O
ATOM 13 C1' G B 120 51.438 0.795 -16.721 1.00 55.53 C
ATOM 14 N9 G B 120 52.493 -0.149 -16.383 1.00 54.68 N
ATOM 15 C8 G B 120 52.358 -1.485 -16.093 1.00 50.50 C
ATOM 16 N7 G B 120 53.494 -2.069 -15.831 1.00 44.29 N
ATOM 17 C5 G B 120 54.438 -1.058 -15.959 1.00 38.94 C
ATOM 18 C6 G B 120 55.840 -1.092 -15.794 1.00 43.13 C
ATOM 19 O6 G B 120 56.549 -2.061 -15.492 1.00 47.17 O
ATOM 20 N1 G B 120 56.418 0.156 -16.016 1.00 39.03 N
ATOM 21 C2 G B 120 55.723 1.293 -16.355 1.00 47.35 C
ATOM 22 N2 G B 120 56.447 2.407 -16.532 1.00 54.80 N
ATOM 23 N3 G B 120 54.407 1.340 -16.512 1.00 41.29 N
ATOM 24 C4 G B 120 53.836 0.131 -16.297 1.00 45.00 C
ATOM 25 P U B 121 48.623 3.766 -18.043 1.00 74.12 P
ATOM 26 OP1 U B 121 49.310 5.052 -17.807 1.00 65.08 O
ATOM 27 OP2 U B 121 47.508 3.338 -17.170 1.00 75.88 O
ATOM 28 O5' U B 121 48.078 3.738 -19.545 1.00 72.43 O
TER
ATOM 2 P G A 87 52.205 5.136 -22.089 1.00 67.99 P
ATOM 3 OP1 G A 87 52.726 5.308 -23.462 1.00 63.06 O
ATOM 4 OP2 G A 87 50.920 5.762 -21.715 1.00 73.15 O
ATOM 5 O5' G A 87 52.129 3.567 -21.779 1.00 69.51 O
ATOM 6 C5' G A 87 52.987 2.636 -22.444 1.00 68.74 C
ATOM 7 C4' G A 87 54.458 2.955 -22.238 1.00 54.98 C
ATOM 8 O4' G A 87 54.801 2.834 -20.835 1.00 57.67 O
ATOM 9 C3' G A 87 55.439 2.001 -22.904 1.00 52.12 C
ATOM 10 O3' G A 87 55.576 2.269 -24.291 1.00 54.47 O
ATOM 11 C2' G A 87 56.701 2.382 -22.148 1.00 52.51 C
ATOM 12 O2' G A 87 57.180 3.654 -22.539 1.00 56.09 O
ATOM 13 C1' G A 87 56.153 2.421 -20.725 1.00 53.21 C
ATOM 14 N9 G A 87 56.206 1.110 -20.088 1.00 38.37 N
ATOM 15 C8 G A 87 55.148 0.318 -19.716 1.00 44.46 C
ATOM 16 N7 G A 87 55.511 -0.813 -19.174 1.00 42.67 N
ATOM 17 C5 G A 87 56.900 -0.769 -19.194 1.00 34.15 C
ATOM 18 C6 G A 87 57.849 -1.716 -18.743 1.00 37.05 C
ATOM 19 O6 G A 87 57.646 -2.817 -18.216 1.00 43.41 O
ATOM 20 N1 G A 87 59.153 -1.279 -18.949 1.00 34.91 N
ATOM 21 C2 G A 87 59.494 -0.080 -19.522 1.00 42.65 C
ATOM 22 N2 G A 87 60.807 0.165 -19.636 1.00 43.10 N
ATOM 23 N3 G A 87 58.615 0.817 -19.951 1.00 40.09 N
ATOM 24 C4 G A 87 57.341 0.407 -19.754 1.00 34.08 C
ATOM 25 P A A 88 55.897 1.063 -25.293 1.00 51.88 P
ATOM 26 OP1 A A 88 55.878 1.612 -26.666 1.00 45.42 O
ATOM 27 OP2 A A 88 55.030 -0.081 -24.934 1.00 43.84 O
ATOM 28 O5' A A 88 57.409 0.685 -24.942 1.00 47.16 O
TER
ATOM 1 O3' C B 119 47.809 -2.981 -14.870 1.00 64.60 O
ATOM 2 P G B 120 47.974 -2.669 -16.430 1.00 71.98 P
ATOM 3 OP1 G B 120 46.630 -2.360 -16.973 1.00 61.48 O
ATOM 4 OP2 G B 120 48.790 -3.750 -17.030 1.00 51.64 O
ATOM 5 O5' G B 120 48.843 -1.327 -16.426 1.00 58.34 O
ATOM 6 C5' G B 120 48.274 -0.122 -15.937 1.00 51.60 C
ATOM 7 C4' G B 120 49.170 1.054 -16.269 1.00 56.44 C
ATOM 8 O4' G B 120 50.475 0.810 -15.688 1.00 62.43 O
ATOM 9 C3' G B 120 49.429 1.273 -17.756 1.00 63.33 C
ATOM 10 O3' G B 120 49.748 2.630 -18.014 1.00 62.83 O
ATOM 11 C2' G B 120 50.667 0.418 -17.977 1.00 63.83 C
ATOM 12 O2' G B 120 51.397 0.794 -19.128 1.00 61.91 O
ATOM 13 C1' G B 120 51.438 0.795 -16.721 1.00 55.53 C
ATOM 14 N9 G B 120 52.493 -0.149 -16.383 1.00 54.68 N
ATOM 15 C8 G B 120 52.358 -1.485 -16.093 1.00 50.50 C
ATOM 16 N7 G B 120 53.494 -2.069 -15.831 1.00 44.29 N
ATOM 17 C5 G B 120 54.438 -1.058 -15.959 1.00 38.94 C
ATOM 18 C6 G B 120 55.840 -1.092 -15.794 1.00 43.13 C
ATOM 19 O6 G B 120 56.549 -2.061 -15.492 1.00 47.17 O
ATOM 20 N1 G B 120 56.418 0.156 -16.016 1.00 39.03 N
ATOM 21 C2 G B 120 55.723 1.293 -16.355 1.00 47.35 C
ATOM 22 N2 G B 120 56.447 2.407 -16.532 1.00 54.80 N
ATOM 23 N3 G B 120 54.407 1.340 -16.512 1.00 41.29 N
ATOM 24 C4 G B 120 53.836 0.131 -16.297 1.00 45.00 C
ATOM 25 P U B 121 48.623 3.766 -18.043 1.00 74.12 P
ATOM 26 OP1 U B 121 49.310 5.052 -17.807 1.00 65.08 O
ATOM 27 OP2 U B 121 47.508 3.338 -17.170 1.00 75.88 O
ATOM 28 O5' U B 121 48.078 3.738 -19.545 1.00 72.43 O
TER
Atoms:
OP1: (52.726,5.308,-23.462)
OP2: (50.920,5.762,-21.715)
C3': (55.439,2.001,-22.904)
C1': (56.153,2.421,-20.725)
C5': (52.987,2.636,-22.444)
O6: (57.646,-2.817,-18.216)
O4': (54.801,2.834,-20.835)
C8: (55.148,0.318,-19.716)
C2: (59.494,-0.080,-19.522)
C6: (57.849,-1.716,-18.743)
C5: (56.900,-0.769,-19.194)
C4: (57.341,0.407,-19.754)
P: (52.205,5.136,-22.089)
C4': (54.458,2.955,-22.238)
C2': (56.701,2.382,-22.148)
O2': (57.180,3.654,-22.539)
N1: (59.153,-1.279,-18.949)
N2: (60.807,0.165,-19.636)
N3: (58.615,0.817,-19.951)
N7: (55.511,-0.813,-19.174)
N9: (56.206,1.110,-20.088)
O5': (52.129,3.567,-21.779)
O3': (55.576,2.269,-24.291)
OP2: (50.920,5.762,-21.715)
C3': (55.439,2.001,-22.904)
C1': (56.153,2.421,-20.725)
C5': (52.987,2.636,-22.444)
O6: (57.646,-2.817,-18.216)
O4': (54.801,2.834,-20.835)
C8: (55.148,0.318,-19.716)
C2: (59.494,-0.080,-19.522)
C6: (57.849,-1.716,-18.743)
C5: (56.900,-0.769,-19.194)
C4: (57.341,0.407,-19.754)
P: (52.205,5.136,-22.089)
C4': (54.458,2.955,-22.238)
C2': (56.701,2.382,-22.148)
O2': (57.180,3.654,-22.539)
N1: (59.153,-1.279,-18.949)
N2: (60.807,0.165,-19.636)
N3: (58.615,0.817,-19.951)
N7: (55.511,-0.813,-19.174)
N9: (56.206,1.110,-20.088)
O5': (52.129,3.567,-21.779)
O3': (55.576,2.269,-24.291)
OP1: (46.630,-2.360,-16.973)
OP2: (48.790,-3.750,-17.030)
C3': (49.429,1.273,-17.756)
C1': (51.438,0.795,-16.721)
C5': (48.274,-0.122,-15.937)
O6: (56.549,-2.061,-15.492)
O4': (50.475,0.810,-15.688)
C8: (52.358,-1.485,-16.093)
C2: (55.723,1.293,-16.355)
C6: (55.840,-1.092,-15.794)
C5: (54.438,-1.058,-15.959)
C4: (53.836,0.131,-16.297)
P: (47.974,-2.669,-16.430)
C4': (49.170,1.054,-16.269)
C2': (50.667,0.418,-17.977)
O2': (51.397,0.794,-19.128)
N1: (56.418,0.156,-16.016)
N2: (56.447,2.407,-16.532)
N3: (54.407,1.340,-16.512)
N7: (53.494,-2.069,-15.831)
N9: (52.493,-0.149,-16.383)
O5': (48.843,-1.327,-16.426)
O3': (49.748,2.630,-18.014)
OP2: (48.790,-3.750,-17.030)
C3': (49.429,1.273,-17.756)
C1': (51.438,0.795,-16.721)
C5': (48.274,-0.122,-15.937)
O6: (56.549,-2.061,-15.492)
O4': (50.475,0.810,-15.688)
C8: (52.358,-1.485,-16.093)
C2: (55.723,1.293,-16.355)
C6: (55.840,-1.092,-15.794)
C5: (54.438,-1.058,-15.959)
C4: (53.836,0.131,-16.297)
P: (47.974,-2.669,-16.430)
C4': (49.170,1.054,-16.269)
C2': (50.667,0.418,-17.977)
O2': (51.397,0.794,-19.128)
N1: (56.418,0.156,-16.016)
N2: (56.447,2.407,-16.532)
N3: (54.407,1.340,-16.512)
N7: (53.494,-2.069,-15.831)
N9: (52.493,-0.149,-16.383)
O5': (48.843,-1.327,-16.426)
O3': (49.748,2.630,-18.014)
Image (generated by PyMOL):