ClaRNA

Doublet info:

Details

Nucleotide types: GG
Description: None: None
Program used: None
Has errors: False

Source

PDB id: 2VQE:A279:A103

Extra

PDB:
ATOM 1 O3' A A 278 144.050 74.549 -7.600 1.00 28.49 O
ATOM 2 P G A 279 143.174 73.467 -6.815 1.00 27.39 P
ATOM 3 OP1 G A 279 143.700 73.412 -5.408 1.00 27.10 O
ATOM 4 OP2 G A 279 143.091 72.229 -7.637 1.00 28.99 O
ATOM 5 O5' G A 279 141.774 74.176 -6.809 1.00 26.55 O
ATOM 6 C5' G A 279 140.592 73.449 -6.580 1.00 25.50 C
ATOM 7 C4' G A 279 139.643 73.625 -7.729 1.00 24.77 C
ATOM 8 O4' G A 279 138.696 72.546 -7.601 1.00 26.41 O
ATOM 9 C3' G A 279 138.802 74.899 -7.770 1.00 24.46 C
ATOM 10 O3' G A 279 139.365 75.978 -8.509 1.00 24.89 O
ATOM 11 C2' G A 279 137.530 74.408 -8.437 1.00 24.72 C
ATOM 12 O2' G A 279 137.676 74.234 -9.826 1.00 25.00 O
ATOM 13 C1' G A 279 137.394 73.029 -7.816 1.00 24.80 C
ATOM 14 N9 G A 279 136.726 73.083 -6.524 1.00 22.22 N
ATOM 15 C8 G A 279 137.276 72.868 -5.281 1.00 21.85 C
ATOM 16 N7 G A 279 136.403 72.953 -4.315 1.00 22.37 N
ATOM 17 C5 G A 279 135.212 73.252 -4.963 1.00 22.77 C
ATOM 18 C6 G A 279 133.923 73.464 -4.444 1.00 22.93 C
ATOM 19 O6 G A 279 133.562 73.440 -3.265 1.00 22.29 O
ATOM 20 N1 G A 279 133.003 73.740 -5.457 1.00 23.03 N
ATOM 21 C2 G A 279 133.305 73.820 -6.801 1.00 22.44 C
ATOM 22 N2 G A 279 132.287 74.121 -7.644 1.00 23.96 N
ATOM 23 N3 G A 279 134.511 73.626 -7.290 1.00 19.37 N
ATOM 24 C4 G A 279 135.405 73.347 -6.325 1.00 21.81 C
ATOM 25 P C A 280 139.220 77.495 -7.959 1.00 25.01 P
ATOM 26 OP1 C A 280 140.142 78.313 -8.801 1.00 26.08 O
ATOM 27 OP2 C A 280 139.382 77.457 -6.476 1.00 25.91 O
ATOM 28 O5' C A 280 137.738 77.941 -8.304 1.00 23.87 O
TER

ATOM 1 O3' U B 102 140.883 67.453 1.705 1.00 28.36 O
ATOM 2 P G B 103 141.251 68.953 1.269 1.00 30.97 P
ATOM 3 OP1 G B 103 142.660 69.226 1.695 1.00 31.07 O
ATOM 4 OP2 G B 103 140.166 69.847 1.725 1.00 29.78 O
ATOM 5 O5' G B 103 141.206 68.890 -0.306 1.00 29.38 O
ATOM 6 C5' G B 103 141.823 67.807 -0.997 1.00 29.89 C
ATOM 7 C4' G B 103 141.518 67.904 -2.460 1.00 29.97 C
ATOM 8 O4' G B 103 140.086 67.805 -2.650 1.00 30.60 O
ATOM 9 C3' G B 103 141.911 69.230 -3.051 1.00 29.41 C
ATOM 10 O3' G B 103 143.220 69.423 -3.616 1.00 30.67 O
ATOM 11 C2' G B 103 140.628 70.048 -3.171 1.00 28.19 C
ATOM 12 O2' G B 103 140.562 70.894 -4.289 1.00 28.61 O
ATOM 13 C1' G B 103 139.593 68.939 -3.334 1.00 28.25 C
ATOM 14 N9 G B 103 138.268 69.222 -2.788 1.00 28.07 N
ATOM 15 C8 G B 103 137.924 69.295 -1.458 1.00 27.76 C
ATOM 16 N7 G B 103 136.656 69.545 -1.269 1.00 26.12 N
ATOM 17 C5 G B 103 136.128 69.641 -2.549 1.00 26.29 C
ATOM 18 C6 G B 103 134.806 69.895 -2.971 1.00 27.03 C
ATOM 19 O6 G B 103 133.799 70.051 -2.281 1.00 28.29 O
ATOM 20 N1 G B 103 134.708 69.942 -4.354 1.00 27.98 N
ATOM 21 C2 G B 103 135.746 69.739 -5.221 1.00 29.65 C
ATOM 22 N2 G B 103 135.446 69.825 -6.524 1.00 31.87 N
ATOM 23 N3 G B 103 136.987 69.472 -4.842 1.00 28.89 N
ATOM 24 C4 G B 103 137.107 69.448 -3.499 1.00 27.51 C
ATOM 25 P A B 104 143.510 69.030 -5.146 1.00 29.83 P
ATOM 26 OP1 A B 104 144.870 69.556 -5.447 1.00 31.41 O
ATOM 27 OP2 A B 104 142.360 69.464 -5.974 1.00 30.84 O
ATOM 28 O5' A B 104 143.548 67.439 -5.133 1.00 29.78 O
TER

Atoms:
OP1: (143.700,73.412,-5.408)
OP2: (143.091,72.229,-7.637)
C3': (138.802,74.899,-7.770)
C1': (137.394,73.029,-7.816)
C5': (140.592,73.449,-6.580)
O6: (133.562,73.440,-3.265)
O4': (138.696,72.546,-7.601)
C8: (137.276,72.868,-5.281)
C2: (133.305,73.820,-6.801)
C6: (133.923,73.464,-4.444)
C5: (135.212,73.252,-4.963)
C4: (135.405,73.347,-6.325)
P: (143.174,73.467,-6.815)
C4': (139.643,73.625,-7.729)
C2': (137.530,74.408,-8.437)
O2': (137.676,74.234,-9.826)
N1: (133.003,73.740,-5.457)
N2: (132.287,74.121,-7.644)
N3: (134.511,73.626,-7.290)
N7: (136.403,72.953,-4.315)
N9: (136.726,73.083,-6.524)
O5': (141.774,74.176,-6.809)
O3': (139.365,75.978,-8.509)
OP1: (142.660,69.226,1.695)
OP2: (140.166,69.847,1.725)
C3': (141.911,69.230,-3.051)
C1': (139.593,68.939,-3.334)
C5': (141.823,67.807,-0.997)
O6: (133.799,70.051,-2.281)
O4': (140.086,67.805,-2.650)
C8: (137.924,69.295,-1.458)
C2: (135.746,69.739,-5.221)
C6: (134.806,69.895,-2.971)
C5: (136.128,69.641,-2.549)
C4: (137.107,69.448,-3.499)
P: (141.251,68.953,1.269)
C4': (141.518,67.904,-2.460)
C2': (140.628,70.048,-3.171)
O2': (140.562,70.894,-4.289)
N1: (134.708,69.942,-4.354)
N2: (135.446,69.825,-6.524)
N3: (136.987,69.472,-4.842)
N7: (136.656,69.545,-1.269)
N9: (138.268,69.222,-2.788)
O5': (141.206,68.890,-0.306)
O3': (143.220,69.423,-3.616)
Image (generated by PyMOL):
PyMOL image
show in jmol