Doublet info:
Details
Nucleotide types:
CA
Description:
None: None
Program used:
None
Has errors:
False
Source
PDB id:
1TRA:A10:A8
Extra
PDB:
ATOM 1 P C A 10 32.894 1.575 24.160 1.00 17.35 P
ATOM 2 OP1 C A 10 31.828 1.868 25.174 1.00 11.78 O
ATOM 3 OP2 C A 10 34.029 2.524 24.324 1.00 20.53 O
ATOM 4 O5' C A 10 33.369 0.060 24.198 1.00 15.69 O
ATOM 5 C5' C A 10 32.428 -1.039 24.280 1.00 20.25 C
ATOM 6 C4' C A 10 33.209 -2.281 23.883 1.00 20.80 C
ATOM 7 O4' C A 10 33.895 -2.035 22.661 1.00 18.07 O
ATOM 8 C3' C A 10 34.306 -2.694 24.859 1.00 9.15 C
ATOM 9 O3' C A 10 33.805 -3.457 25.955 1.00 11.24 O
ATOM 10 C2' C A 10 35.247 -3.500 23.958 1.00 12.50 C
ATOM 11 O2' C A 10 34.682 -4.799 23.864 1.00 13.93 O
ATOM 12 C1' C A 10 35.150 -2.751 22.654 1.00 13.14 C
ATOM 13 N1 C A 10 36.249 -1.788 22.459 1.00 13.12 N
ATOM 14 C2 C A 10 37.500 -2.284 22.112 1.00 16.38 C
ATOM 15 O2 C A 10 37.680 -3.490 21.980 1.00 21.76 O
ATOM 16 N3 C A 10 38.509 -1.382 21.923 1.00 17.07 N
ATOM 17 C4 C A 10 38.318 -0.043 22.068 1.00 18.96 C
ATOM 18 N4 C A 10 39.350 0.789 21.873 1.00 12.52 N
ATOM 19 C5 C A 10 37.033 0.456 22.421 1.00 20.34 C
ATOM 20 C6 C A 10 36.046 -0.443 22.598 1.00 18.76 C
ATOM 21 P U A 11 34.108 -3.040 27.480 1.00 21.07 P
ATOM 22 OP1 U A 11 32.976 -3.390 28.393 1.00 12.09 O
ATOM 23 OP2 U A 11 34.294 -1.568 27.373 1.00 13.04 O
ATOM 24 O5' U A 11 35.405 -3.929 27.814 1.00 16.39 O
TER
ATOM 1 O3' U B 7 38.734 6.840 27.505 1.00 0.00 O
ATOM 2 P A B 8 38.196 5.574 26.636 1.00 0.49 P
ATOM 3 OP1 A B 8 36.755 5.305 26.970 1.00 8.76 O
ATOM 4 OP2 A B 8 39.061 4.449 27.115 1.00 1.26 O
ATOM 5 O5' A B 8 38.442 5.941 25.117 1.00 0.00 O
ATOM 6 C5' A B 8 37.741 7.040 24.513 1.00 2.21 C
ATOM 7 C4' A B 8 37.645 6.797 23.020 1.00 1.36 C
ATOM 8 O4' A B 8 38.959 6.790 22.459 1.00 2.90 O
ATOM 9 C3' A B 8 37.004 5.458 22.629 1.00 2.48 C
ATOM 10 O3' A B 8 36.223 5.601 21.413 1.00 7.06 O
ATOM 11 C2' A B 8 38.221 4.575 22.371 1.00 0.12 C
ATOM 12 O2' A B 8 37.834 3.520 21.533 1.00 0.45 O
ATOM 13 C1' A B 8 39.182 5.551 21.760 1.00 0.00 C
ATOM 14 N9 A B 8 40.576 5.095 21.911 1.00 1.36 N
ATOM 15 C8 A B 8 41.069 4.019 22.598 1.00 5.97 C
ATOM 16 N7 A B 8 42.380 3.889 22.528 1.00 1.81 N
ATOM 17 C5 A B 8 42.767 4.962 21.728 1.00 7.16 C
ATOM 18 C6 A B 8 44.047 5.378 21.268 1.00 8.73 C
ATOM 19 N6 A B 8 45.181 4.762 21.564 1.00 11.75 N
ATOM 20 N1 A B 8 44.041 6.497 20.487 1.00 10.97 N
ATOM 21 C2 A B 8 42.890 7.153 20.172 1.00 5.10 C
ATOM 22 N3 A B 8 41.660 6.813 20.569 1.00 7.29 N
ATOM 23 C4 A B 8 41.672 5.708 21.344 1.00 6.49 C
TER
ATOM 2 OP1 C A 10 31.828 1.868 25.174 1.00 11.78 O
ATOM 3 OP2 C A 10 34.029 2.524 24.324 1.00 20.53 O
ATOM 4 O5' C A 10 33.369 0.060 24.198 1.00 15.69 O
ATOM 5 C5' C A 10 32.428 -1.039 24.280 1.00 20.25 C
ATOM 6 C4' C A 10 33.209 -2.281 23.883 1.00 20.80 C
ATOM 7 O4' C A 10 33.895 -2.035 22.661 1.00 18.07 O
ATOM 8 C3' C A 10 34.306 -2.694 24.859 1.00 9.15 C
ATOM 9 O3' C A 10 33.805 -3.457 25.955 1.00 11.24 O
ATOM 10 C2' C A 10 35.247 -3.500 23.958 1.00 12.50 C
ATOM 11 O2' C A 10 34.682 -4.799 23.864 1.00 13.93 O
ATOM 12 C1' C A 10 35.150 -2.751 22.654 1.00 13.14 C
ATOM 13 N1 C A 10 36.249 -1.788 22.459 1.00 13.12 N
ATOM 14 C2 C A 10 37.500 -2.284 22.112 1.00 16.38 C
ATOM 15 O2 C A 10 37.680 -3.490 21.980 1.00 21.76 O
ATOM 16 N3 C A 10 38.509 -1.382 21.923 1.00 17.07 N
ATOM 17 C4 C A 10 38.318 -0.043 22.068 1.00 18.96 C
ATOM 18 N4 C A 10 39.350 0.789 21.873 1.00 12.52 N
ATOM 19 C5 C A 10 37.033 0.456 22.421 1.00 20.34 C
ATOM 20 C6 C A 10 36.046 -0.443 22.598 1.00 18.76 C
ATOM 21 P U A 11 34.108 -3.040 27.480 1.00 21.07 P
ATOM 22 OP1 U A 11 32.976 -3.390 28.393 1.00 12.09 O
ATOM 23 OP2 U A 11 34.294 -1.568 27.373 1.00 13.04 O
ATOM 24 O5' U A 11 35.405 -3.929 27.814 1.00 16.39 O
TER
ATOM 1 O3' U B 7 38.734 6.840 27.505 1.00 0.00 O
ATOM 2 P A B 8 38.196 5.574 26.636 1.00 0.49 P
ATOM 3 OP1 A B 8 36.755 5.305 26.970 1.00 8.76 O
ATOM 4 OP2 A B 8 39.061 4.449 27.115 1.00 1.26 O
ATOM 5 O5' A B 8 38.442 5.941 25.117 1.00 0.00 O
ATOM 6 C5' A B 8 37.741 7.040 24.513 1.00 2.21 C
ATOM 7 C4' A B 8 37.645 6.797 23.020 1.00 1.36 C
ATOM 8 O4' A B 8 38.959 6.790 22.459 1.00 2.90 O
ATOM 9 C3' A B 8 37.004 5.458 22.629 1.00 2.48 C
ATOM 10 O3' A B 8 36.223 5.601 21.413 1.00 7.06 O
ATOM 11 C2' A B 8 38.221 4.575 22.371 1.00 0.12 C
ATOM 12 O2' A B 8 37.834 3.520 21.533 1.00 0.45 O
ATOM 13 C1' A B 8 39.182 5.551 21.760 1.00 0.00 C
ATOM 14 N9 A B 8 40.576 5.095 21.911 1.00 1.36 N
ATOM 15 C8 A B 8 41.069 4.019 22.598 1.00 5.97 C
ATOM 16 N7 A B 8 42.380 3.889 22.528 1.00 1.81 N
ATOM 17 C5 A B 8 42.767 4.962 21.728 1.00 7.16 C
ATOM 18 C6 A B 8 44.047 5.378 21.268 1.00 8.73 C
ATOM 19 N6 A B 8 45.181 4.762 21.564 1.00 11.75 N
ATOM 20 N1 A B 8 44.041 6.497 20.487 1.00 10.97 N
ATOM 21 C2 A B 8 42.890 7.153 20.172 1.00 5.10 C
ATOM 22 N3 A B 8 41.660 6.813 20.569 1.00 7.29 N
ATOM 23 C4 A B 8 41.672 5.708 21.344 1.00 6.49 C
TER
Atoms:
C2: (37.500,-2.284,22.112)
OP1: (31.828,1.868,25.174)
OP2: (34.029,2.524,24.324)
C4: (38.318,-0.043,22.068)
O5': (33.369,0.060,24.198)
C3': (34.306,-2.694,24.859)
C1': (35.150,-2.751,22.654)
O4': (33.895,-2.035,22.661)
C5': (32.428,-1.039,24.280)
P: (32.894,1.575,24.160)
O2: (37.680,-3.490,21.980)
C4': (33.209,-2.281,23.883)
C2': (35.247,-3.500,23.958)
O2': (34.682,-4.799,23.864)
N1: (36.249,-1.788,22.459)
N3: (38.509,-1.382,21.923)
N4: (39.350,0.789,21.873)
C6: (36.046,-0.443,22.598)
C5: (37.033,0.456,22.421)
O3': (33.805,-3.457,25.955)
OP1: (31.828,1.868,25.174)
OP2: (34.029,2.524,24.324)
C4: (38.318,-0.043,22.068)
O5': (33.369,0.060,24.198)
C3': (34.306,-2.694,24.859)
C1': (35.150,-2.751,22.654)
O4': (33.895,-2.035,22.661)
C5': (32.428,-1.039,24.280)
P: (32.894,1.575,24.160)
O2: (37.680,-3.490,21.980)
C4': (33.209,-2.281,23.883)
C2': (35.247,-3.500,23.958)
O2': (34.682,-4.799,23.864)
N1: (36.249,-1.788,22.459)
N3: (38.509,-1.382,21.923)
N4: (39.350,0.789,21.873)
C6: (36.046,-0.443,22.598)
C5: (37.033,0.456,22.421)
O3': (33.805,-3.457,25.955)
OP1: (36.755,5.305,26.970)
OP2: (39.061,4.449,27.115)
C3': (37.004,5.458,22.629)
C1': (39.182,5.551,21.760)
C5': (37.741,7.040,24.513)
O4': (38.959,6.790,22.459)
C8: (41.069,4.019,22.598)
O2': (37.834,3.520,21.533)
C6: (44.047,5.378,21.268)
C5: (42.767,4.962,21.728)
C4: (41.672,5.708,21.344)
P: (38.196,5.574,26.636)
C4': (37.645,6.797,23.020)
C2': (38.221,4.575,22.371)
C2: (42.890,7.153,20.172)
N1: (44.041,6.497,20.487)
N3: (41.660,6.813,20.569)
N6: (45.181,4.762,21.564)
N7: (42.380,3.889,22.528)
N9: (40.576,5.095,21.911)
O5': (38.442,5.941,25.117)
O3': (36.223,5.601,21.413)
OP2: (39.061,4.449,27.115)
C3': (37.004,5.458,22.629)
C1': (39.182,5.551,21.760)
C5': (37.741,7.040,24.513)
O4': (38.959,6.790,22.459)
C8: (41.069,4.019,22.598)
O2': (37.834,3.520,21.533)
C6: (44.047,5.378,21.268)
C5: (42.767,4.962,21.728)
C4: (41.672,5.708,21.344)
P: (38.196,5.574,26.636)
C4': (37.645,6.797,23.020)
C2': (38.221,4.575,22.371)
C2: (42.890,7.153,20.172)
N1: (44.041,6.497,20.487)
N3: (41.660,6.813,20.569)
N6: (45.181,4.762,21.564)
N7: (42.380,3.889,22.528)
N9: (40.576,5.095,21.911)
O5': (38.442,5.941,25.117)
O3': (36.223,5.601,21.413)
Image (generated by PyMOL):