ClaRNA

Doublet info:

Details

Nucleotide types: GG
Description: None: None
Program used: None
Has errors: False

Source

PDB id: 3KNH:A1239:A1238

Extra

PDB:
ATOM 1 O3' G A1238 180.480 37.098 6.952 1.00111.04 O
ATOM 2 P G A1239 181.026 38.183 7.994 1.00108.45 P
ATOM 3 OP1 G A1239 180.795 37.629 9.351 1.00 94.95 O
ATOM 4 OP2 G A1239 180.430 39.500 7.630 1.00108.09 O
ATOM 5 O5' G A1239 182.596 38.198 7.682 1.00118.25 O
ATOM 6 C5' G A1239 183.336 39.419 7.703 1.00125.25 C
ATOM 7 C4' G A1239 184.582 39.323 6.842 1.00127.46 C
ATOM 8 O4' G A1239 184.220 39.021 5.467 1.00129.43 O
ATOM 9 C3' G A1239 185.323 40.650 6.766 1.00130.16 C
ATOM 10 O3' G A1239 186.196 40.821 7.872 1.00129.61 O
ATOM 11 C2' G A1239 185.995 40.598 5.399 1.00129.43 C
ATOM 12 O2' G A1239 187.209 39.869 5.391 1.00124.10 O
ATOM 13 C1' G A1239 184.928 39.873 4.574 1.00128.60 C
ATOM 14 N9 G A1239 183.948 40.784 3.975 1.00127.44 N
ATOM 15 C8 G A1239 182.590 40.769 4.197 1.00126.75 C
ATOM 16 N7 G A1239 181.949 41.691 3.536 1.00127.90 N
ATOM 17 C5 G A1239 182.934 42.361 2.827 1.00128.83 C
ATOM 18 C6 G A1239 182.831 43.452 1.929 1.00129.35 C
ATOM 19 O6 G A1239 181.812 44.045 1.552 1.00129.50 O
ATOM 20 N1 G A1239 184.077 43.842 1.450 1.00127.60 N
ATOM 21 C2 G A1239 185.269 43.250 1.780 1.00129.29 C
ATOM 22 N2 G A1239 186.363 43.785 1.219 1.00131.01 N
ATOM 23 N3 G A1239 185.379 42.212 2.601 1.00131.53 N
ATOM 24 C4 G A1239 184.179 41.823 3.088 1.00128.52 C
ATOM 25 P G A1240 185.977 42.069 8.862 1.00130.51 P
ATOM 26 OP1 G A1240 186.074 41.547 10.249 1.00128.84 O
ATOM 27 OP2 G A1240 184.758 42.826 8.435 1.00121.30 O
ATOM 28 O5' G A1240 187.246 42.988 8.585 1.00128.26 O
TER

ATOM 1 O3' C B1237 174.695 36.585 5.146 1.00108.09 O
ATOM 2 P G B1238 175.402 37.581 6.190 1.00107.53 P
ATOM 3 OP1 G B1238 175.245 37.023 7.559 1.00100.20 O
ATOM 4 OP2 G B1238 174.885 38.934 5.886 1.00105.06 O
ATOM 5 O5' G B1238 176.947 37.527 5.802 1.00104.88 O
ATOM 6 C5' G B1238 177.652 36.296 5.830 1.00104.96 C
ATOM 7 C4' G B1238 179.003 36.437 5.181 1.00107.29 C
ATOM 8 O4' G B1238 178.894 36.779 3.775 1.00110.07 O
ATOM 9 C3' G B1238 179.884 37.528 5.743 1.00107.49 C
ATOM 10 O3' G B1238 180.480 37.098 6.952 1.00111.04 O
ATOM 11 C2' G B1238 180.902 37.744 4.628 1.00111.65 C
ATOM 12 O2' G B1238 181.988 36.837 4.697 1.00107.94 O
ATOM 13 C1' G B1238 180.062 37.479 3.374 1.00111.35 C
ATOM 14 N9 G B1238 179.692 38.712 2.677 1.00116.54 N
ATOM 15 C8 G B1238 178.514 39.419 2.771 1.00119.18 C
ATOM 16 N7 G B1238 178.518 40.521 2.065 1.00119.70 N
ATOM 17 C5 G B1238 179.767 40.538 1.454 1.00122.44 C
ATOM 18 C6 G B1238 180.360 41.498 0.577 1.00122.86 C
ATOM 19 O6 G B1238 179.886 42.567 0.159 1.00120.60 O
ATOM 20 N1 G B1238 181.645 41.113 0.195 1.00125.81 N
ATOM 21 C2 G B1238 182.284 39.965 0.605 1.00126.44 C
ATOM 22 N2 G B1238 183.522 39.763 0.130 1.00123.84 N
ATOM 23 N3 G B1238 181.749 39.074 1.424 1.00125.68 N
ATOM 24 C4 G B1238 180.499 39.421 1.808 1.00122.54 C
ATOM 25 P G B1239 181.026 38.183 7.994 1.00108.45 P
ATOM 26 OP1 G B1239 180.795 37.629 9.351 1.00 94.95 O
ATOM 27 OP2 G B1239 180.430 39.500 7.630 1.00108.09 O
ATOM 28 O5' G B1239 182.596 38.198 7.682 1.00118.25 O
TER

Atoms:
OP1: (180.795,37.629,9.351)
OP2: (180.430,39.500,7.630)
C3': (185.323,40.650,6.766)
C1': (184.928,39.873,4.574)
C5': (183.336,39.419,7.703)
O6: (181.812,44.045,1.552)
O4': (184.220,39.021,5.467)
C8: (182.590,40.769,4.197)
C2: (185.269,43.250,1.780)
C6: (182.831,43.452,1.929)
C5: (182.934,42.361,2.827)
C4: (184.179,41.823,3.088)
P: (181.026,38.183,7.994)
C4': (184.582,39.323,6.842)
C2': (185.995,40.598,5.399)
O2': (187.209,39.869,5.391)
N1: (184.077,43.842,1.450)
N2: (186.363,43.785,1.219)
N3: (185.379,42.212,2.601)
N7: (181.949,41.691,3.536)
N9: (183.948,40.784,3.975)
O5': (182.596,38.198,7.682)
O3': (186.196,40.821,7.872)
OP1: (175.245,37.023,7.559)
OP2: (174.885,38.934,5.886)
C3': (179.884,37.528,5.743)
C1': (180.062,37.479,3.374)
C5': (177.652,36.296,5.830)
O6: (179.886,42.567,0.159)
O4': (178.894,36.779,3.775)
C8: (178.514,39.419,2.771)
C2: (182.284,39.965,0.605)
C6: (180.360,41.498,0.577)
C5: (179.767,40.538,1.454)
C4: (180.499,39.421,1.808)
P: (175.402,37.581,6.190)
C4': (179.003,36.437,5.181)
C2': (180.902,37.744,4.628)
O2': (181.988,36.837,4.697)
N1: (181.645,41.113,0.195)
N2: (183.522,39.763,0.130)
N3: (181.749,39.074,1.424)
N7: (178.518,40.521,2.065)
N9: (179.692,38.712,2.677)
O5': (176.947,37.527,5.802)
O3': (180.480,37.098,6.952)
Image (generated by PyMOL):
PyMOL image
show in jmol