ClaRNA

Doublet info:

Details

Nucleotide types: GG
Description: None: None
Program used: None
Has errors: False

Source

PDB id: 3OHJ:A1742:A1741

Extra

PDB:
ATOM 1 O3' G A1741 45.629 -9.866 -35.805 1.00 41.86 O
ATOM 2 P G A1742 45.422 -8.281 -35.892 1.00 36.40 P
ATOM 3 OP1 G A1742 43.992 -8.011 -35.518 1.00 38.12 O
ATOM 4 OP2 G A1742 45.914 -7.863 -37.227 1.00 32.37 O
ATOM 5 O5' G A1742 46.377 -7.711 -34.769 1.00 33.74 O
ATOM 6 C5' G A1742 46.546 -8.393 -33.541 1.00 38.22 C
ATOM 7 C4' G A1742 48.010 -8.602 -33.232 1.00 38.27 C
ATOM 8 O4' G A1742 48.587 -9.555 -34.154 1.00 37.37 O
ATOM 9 C3' G A1742 48.906 -7.400 -33.389 1.00 31.87 C
ATOM 10 O3' G A1742 48.790 -6.503 -32.322 1.00 35.55 O
ATOM 11 C2' G A1742 50.277 -8.042 -33.488 1.00 37.26 C
ATOM 12 O2' G A1742 50.726 -8.435 -32.200 1.00 35.99 O
ATOM 13 C1' G A1742 49.960 -9.310 -34.276 1.00 34.81 C
ATOM 14 N9 G A1742 50.309 -9.227 -35.705 1.00 38.48 N
ATOM 15 C8 G A1742 49.476 -9.588 -36.730 1.00 38.91 C
ATOM 16 N7 G A1742 50.021 -9.487 -37.904 1.00 38.40 N
ATOM 17 C5 G A1742 51.304 -9.057 -37.640 1.00 37.32 C
ATOM 18 C6 G A1742 52.351 -8.783 -38.540 1.00 43.65 C
ATOM 19 O6 G A1742 52.352 -8.863 -39.779 1.00 45.88 O
ATOM 20 N1 G A1742 53.489 -8.368 -37.858 1.00 46.94 N
ATOM 21 C2 G A1742 53.625 -8.231 -36.505 1.00 42.40 C
ATOM 22 N2 G A1742 54.843 -7.819 -36.095 1.00 38.67 N
ATOM 23 N3 G A1742 52.643 -8.501 -35.655 1.00 39.09 N
ATOM 24 C4 G A1742 51.519 -8.905 -36.287 1.00 40.34 C
ATOM 25 P U A1743 48.894 -4.934 -32.584 1.00 44.38 P
ATOM 26 OP1 U A1743 48.977 -4.287 -31.246 1.00 42.17 O
ATOM 27 OP2 U A1743 47.781 -4.554 -33.491 1.00 52.94 O
ATOM 28 O5' U A1743 50.276 -4.803 -33.349 1.00 35.72 O
TER

ATOM 1 O3' A B1740 47.477 -14.226 -35.221 1.00 44.50 O
ATOM 2 P G B1741 46.186 -14.625 -34.347 1.00 46.38 P
ATOM 3 OP1 G B1741 46.634 -14.894 -32.971 1.00 50.50 O
ATOM 4 OP2 G B1741 45.489 -15.700 -35.102 1.00 44.60 O
ATOM 5 O5' G B1741 45.331 -13.287 -34.354 1.00 44.33 O
ATOM 6 C5' G B1741 44.497 -12.960 -35.448 1.00 46.56 C
ATOM 7 C4' G B1741 45.239 -12.197 -36.507 1.00 45.59 C
ATOM 8 O4' G B1741 44.932 -12.776 -37.793 1.00 56.54 O
ATOM 9 C3' G B1741 44.869 -10.718 -36.646 1.00 48.20 C
ATOM 10 O3' G B1741 45.629 -9.866 -35.805 1.00 41.86 O
ATOM 11 C2' G B1741 45.091 -10.442 -38.114 1.00 52.27 C
ATOM 12 O2' G B1741 46.473 -10.237 -38.367 1.00 43.51 O
ATOM 13 C1' G B1741 44.665 -11.768 -38.734 1.00 68.74 C
ATOM 14 N9 G B1741 43.226 -11.800 -39.026 1.00167.52 N
ATOM 15 C8 G B1741 42.236 -11.214 -38.292 1.00169.42 C
ATOM 16 N7 G B1741 41.052 -11.425 -38.780 1.00178.48 N
ATOM 17 C5 G B1741 41.283 -12.206 -39.895 1.00185.57 C
ATOM 18 C6 G B1741 40.372 -12.747 -40.825 1.00196.97 C
ATOM 19 O6 G B1741 39.141 -12.635 -40.841 1.00198.24 O
ATOM 20 N1 G B1741 41.029 -13.479 -41.805 1.00198.85 N
ATOM 21 C2 G B1741 42.385 -13.664 -41.878 1.00195.20 C
ATOM 22 N2 G B1741 42.829 -14.403 -42.903 1.00198.29 N
ATOM 23 N3 G B1741 43.242 -13.161 -41.013 1.00189.80 N
ATOM 24 C4 G B1741 42.620 -12.450 -40.060 1.00183.14 C
ATOM 25 P G B1742 45.422 -8.281 -35.892 1.00 36.40 P
ATOM 26 OP1 G B1742 43.992 -8.011 -35.518 1.00 38.12 O
ATOM 27 OP2 G B1742 45.914 -7.863 -37.227 1.00 32.37 O
ATOM 28 O5' G B1742 46.377 -7.711 -34.769 1.00 33.74 O
TER

Atoms:
OP1: (43.992,-8.011,-35.518)
OP2: (45.914,-7.863,-37.227)
C3': (48.906,-7.400,-33.389)
C1': (49.960,-9.310,-34.276)
C5': (46.546,-8.393,-33.541)
O6: (52.352,-8.863,-39.779)
O4': (48.587,-9.555,-34.154)
C8: (49.476,-9.588,-36.730)
C2: (53.625,-8.231,-36.505)
C6: (52.351,-8.783,-38.540)
C5: (51.304,-9.057,-37.640)
C4: (51.519,-8.905,-36.287)
P: (45.422,-8.281,-35.892)
C4': (48.010,-8.602,-33.232)
C2': (50.277,-8.042,-33.488)
O2': (50.726,-8.435,-32.200)
N1: (53.489,-8.368,-37.858)
N2: (54.843,-7.819,-36.095)
N3: (52.643,-8.501,-35.655)
N7: (50.021,-9.487,-37.904)
N9: (50.309,-9.227,-35.705)
O5': (46.377,-7.711,-34.769)
O3': (48.790,-6.503,-32.322)
OP1: (46.634,-14.894,-32.971)
OP2: (45.489,-15.700,-35.102)
C3': (44.869,-10.718,-36.646)
C1': (44.665,-11.768,-38.734)
C5': (44.497,-12.960,-35.448)
O6: (39.141,-12.635,-40.841)
O4': (44.932,-12.776,-37.793)
C8: (42.236,-11.214,-38.292)
C2: (42.385,-13.664,-41.878)
C6: (40.372,-12.747,-40.825)
C5: (41.283,-12.206,-39.895)
C4: (42.620,-12.450,-40.060)
P: (46.186,-14.625,-34.347)
C4': (45.239,-12.197,-36.507)
C2': (45.091,-10.442,-38.114)
O2': (46.473,-10.237,-38.367)
N1: (41.029,-13.479,-41.805)
N2: (42.829,-14.403,-42.903)
N3: (43.242,-13.161,-41.013)
N7: (41.052,-11.425,-38.780)
N9: (43.226,-11.800,-39.026)
O5': (45.331,-13.287,-34.354)
O3': (45.629,-9.866,-35.805)
Image (generated by PyMOL):
PyMOL image
show in jmol