ClaRNA

Doublet info:

Details

Nucleotide types: GG
Description: None: None
Program used: None
Has errors: False

Source

PDB id: 3OHY:A898:A897

Extra

PDB:
ATOM 1 O3' G A 897 104.046 36.363 -0.320 1.00 94.94 O
ATOM 2 P G A 898 105.104 37.093 -1.279 1.00 98.47 P
ATOM 3 OP1 G A 898 106.445 36.875 -0.691 1.00103.10 O
ATOM 4 OP2 G A 898 104.631 38.481 -1.482 1.00106.59 O
ATOM 5 O5' G A 898 104.961 36.273 -2.640 1.00110.91 O
ATOM 6 C5' G A 898 103.884 36.528 -3.537 1.00102.64 C
ATOM 7 C4' G A 898 103.495 35.295 -4.323 1.00102.06 C
ATOM 8 O4' G A 898 104.524 34.269 -4.197 1.00109.04 O
ATOM 9 C3' G A 898 102.219 34.594 -3.879 1.00 95.27 C
ATOM 10 O3' G A 898 101.049 35.213 -4.373 1.00101.54 O
ATOM 11 C2' G A 898 102.423 33.184 -4.403 1.00108.44 C
ATOM 12 O2' G A 898 102.188 33.137 -5.809 1.00105.16 O
ATOM 13 C1' G A 898 103.921 32.990 -4.155 1.00107.03 C
ATOM 14 N9 G A 898 104.191 32.391 -2.831 1.00112.19 N
ATOM 15 C8 G A 898 104.411 33.085 -1.672 1.00114.90 C
ATOM 16 N7 G A 898 104.640 32.320 -0.644 1.00118.34 N
ATOM 17 C5 G A 898 104.569 31.038 -1.153 1.00116.54 C
ATOM 18 C6 G A 898 104.738 29.797 -0.497 1.00119.16 C
ATOM 19 O6 G A 898 104.988 29.585 0.695 1.00121.76 O
ATOM 20 N1 G A 898 104.584 28.739 -1.378 1.00120.42 N
ATOM 21 C2 G A 898 104.309 28.862 -2.714 1.00117.53 C
ATOM 22 N2 G A 898 104.201 27.718 -3.397 1.00117.50 N
ATOM 23 N3 G A 898 104.154 30.015 -3.337 1.00117.36 N
ATOM 24 C4 G A 898 104.297 31.060 -2.501 1.00114.54 C
ATOM 25 P G A 899 100.139 36.092 -3.392 1.00115.02 P
ATOM 26 OP1 G A 899 100.300 35.528 -2.038 1.00108.33 O
ATOM 27 OP2 G A 899 98.787 36.145 -3.974 1.00114.04 O
ATOM 28 O5' G A 899 100.826 37.534 -3.480 1.00134.56 O
TER

ATOM 1 O3' C B 896 106.941 37.237 5.079 1.00107.10 O
ATOM 2 P G B 897 107.088 37.716 3.546 1.00102.10 P
ATOM 3 OP1 G B 897 108.096 36.825 2.898 1.00 94.11 O
ATOM 4 OP2 G B 897 107.338 39.176 3.566 1.00 93.29 O
ATOM 5 O5' G B 897 105.639 37.433 2.943 1.00104.72 O
ATOM 6 C5' G B 897 105.196 36.106 2.687 1.00106.65 C
ATOM 7 C4' G B 897 103.812 36.089 2.083 1.00 94.00 C
ATOM 8 O4' G B 897 102.847 36.572 3.046 1.00 87.48 O
ATOM 9 C3' G B 897 103.616 36.979 0.876 1.00 89.65 C
ATOM 10 O3' G B 897 104.046 36.363 -0.320 1.00 94.94 O
ATOM 11 C2' G B 897 102.121 37.272 0.907 1.00 94.77 C
ATOM 12 O2' G B 897 101.382 36.203 0.353 1.00108.22 O
ATOM 13 C1' G B 897 101.840 37.306 2.397 1.00 88.29 C
ATOM 14 N9 G B 897 101.846 38.673 2.919 1.00 93.89 N
ATOM 15 C8 G B 897 102.898 39.341 3.482 1.00 97.28 C
ATOM 16 N7 G B 897 102.575 40.549 3.854 1.00 99.29 N
ATOM 17 C5 G B 897 101.236 40.678 3.505 1.00 94.39 C
ATOM 18 C6 G B 897 100.348 41.778 3.662 1.00 97.07 C
ATOM 19 O6 G B 897 100.584 42.900 4.164 1.00 92.58 O
ATOM 20 N1 G B 897 99.081 41.456 3.160 1.00 96.44 N
ATOM 21 C2 G B 897 98.727 40.255 2.590 1.00 91.97 C
ATOM 22 N2 G B 897 97.459 40.149 2.170 1.00 89.95 N
ATOM 23 N3 G B 897 99.552 39.233 2.444 1.00 88.85 N
ATOM 24 C4 G B 897 100.775 39.519 2.923 1.00 89.85 C
ATOM 25 P G B 898 105.104 37.093 -1.279 1.00 98.47 P
ATOM 26 OP1 G B 898 106.445 36.875 -0.691 1.00103.10 O
ATOM 27 OP2 G B 898 104.631 38.481 -1.482 1.00106.59 O
ATOM 28 O5' G B 898 104.961 36.273 -2.640 1.00110.91 O
TER

Atoms:
OP1: (106.445,36.875,-0.691)
OP2: (104.631,38.481,-1.482)
C3': (102.219,34.594,-3.879)
C1': (103.921,32.990,-4.155)
C5': (103.884,36.528,-3.537)
O6: (104.988,29.585,0.695)
O4': (104.524,34.269,-4.197)
C8: (104.411,33.085,-1.672)
C2: (104.309,28.862,-2.714)
C6: (104.738,29.797,-0.497)
C5: (104.569,31.038,-1.153)
C4: (104.297,31.060,-2.501)
P: (105.104,37.093,-1.279)
C4': (103.495,35.295,-4.323)
C2': (102.423,33.184,-4.403)
O2': (102.188,33.137,-5.809)
N1: (104.584,28.739,-1.378)
N2: (104.201,27.718,-3.397)
N3: (104.154,30.015,-3.337)
N7: (104.640,32.320,-0.644)
N9: (104.191,32.391,-2.831)
O5': (104.961,36.273,-2.640)
O3': (101.049,35.213,-4.373)
OP1: (108.096,36.825,2.898)
OP2: (107.338,39.176,3.566)
C3': (103.616,36.979,0.876)
C1': (101.840,37.306,2.397)
C5': (105.196,36.106,2.687)
O6: (100.584,42.900,4.164)
O4': (102.847,36.572,3.046)
C8: (102.898,39.341,3.482)
C2: (98.727,40.255,2.590)
C6: (100.348,41.778,3.662)
C5: (101.236,40.678,3.505)
C4: (100.775,39.519,2.923)
P: (107.088,37.716,3.546)
C4': (103.812,36.089,2.083)
C2': (102.121,37.272,0.907)
O2': (101.382,36.203,0.353)
N1: (99.081,41.456,3.160)
N2: (97.459,40.149,2.170)
N3: (99.552,39.233,2.444)
N7: (102.575,40.549,3.854)
N9: (101.846,38.673,2.919)
O5': (105.639,37.433,2.943)
O3': (104.046,36.363,-0.320)
Image (generated by PyMOL):
PyMOL image
show in jmol