ClaRNA

Doublet info:

Details

Nucleotide types: GG
Description: None: None
Program used: None
Has errors: False

Source

PDB id: 5MSF:R17:R16

Extra

PDB:
ATOM 1 O3' G A 16 -50.304 41.212 68.346 0.70100.00 O
ATOM 2 P G A 17 -50.121 39.827 67.540 0.70100.00 P
ATOM 3 OP1 G A 17 -48.668 39.593 67.349 0.70100.00 O
ATOM 4 OP2 G A 17 -51.009 39.862 66.345 0.70100.00 O
ATOM 5 O5' G A 17 -50.691 38.738 68.560 0.70100.00 O
ATOM 6 C5' G A 17 -50.550 38.920 69.971 0.70100.00 C
ATOM 7 C4' G A 17 -51.913 38.984 70.629 0.70100.00 C
ATOM 8 O4' G A 17 -52.633 40.146 70.130 0.70100.00 O
ATOM 9 C3' G A 17 -52.838 37.811 70.338 0.70100.00 C
ATOM 10 O3' G A 17 -52.537 36.625 71.096 0.70100.00 O
ATOM 11 C2' G A 17 -54.216 38.426 70.565 0.70100.00 C
ATOM 12 O2' G A 17 -54.562 38.518 71.932 0.70100.00 O
ATOM 13 C1' G A 17 -54.016 39.833 69.995 0.70100.00 C
ATOM 14 N9 G A 17 -54.353 39.956 68.576 0.70100.00 N
ATOM 15 C8 G A 17 -53.475 40.160 67.540 0.70100.00 C
ATOM 16 N7 G A 17 -54.056 40.237 66.375 0.70 97.99 N
ATOM 17 C5 G A 17 -55.406 40.075 66.652 0.70100.00 C
ATOM 18 C6 G A 17 -56.526 40.070 65.778 0.70100.00 C
ATOM 19 O6 G A 17 -56.548 40.216 64.547 0.70 89.57 O
ATOM 20 N1 G A 17 -57.714 39.871 66.475 0.70 99.74 N
ATOM 21 C2 G A 17 -57.814 39.698 67.838 0.70100.00 C
ATOM 22 N2 G A 17 -59.051 39.516 68.317 0.70100.00 N
ATOM 23 N3 G A 17 -56.776 39.701 68.664 0.70100.00 N
ATOM 24 C4 G A 17 -55.610 39.895 68.005 0.70100.00 C
TER

ATOM 1 O3' G B 15 -48.193 46.858 65.337 0.70100.00 O
ATOM 2 P G B 16 -47.995 45.299 65.027 0.70100.00 P
ATOM 3 OP1 G B 16 -46.555 45.027 64.794 0.70100.00 O
ATOM 4 OP2 G B 16 -48.986 44.932 63.980 0.70100.00 O
ATOM 5 O5' G B 16 -48.446 44.606 66.385 0.70100.00 O
ATOM 6 C5' G B 16 -49.326 43.495 66.364 0.70 97.90 C
ATOM 7 C4' G B 16 -50.193 43.498 67.594 0.70100.00 C
ATOM 8 O4' G B 16 -51.141 44.599 67.523 0.70100.00 O
ATOM 9 C3' G B 16 -51.057 42.268 67.767 0.70100.00 C
ATOM 10 O3' G B 16 -50.304 41.212 68.346 0.70100.00 O
ATOM 11 C2' G B 16 -52.175 42.798 68.654 0.70100.00 C
ATOM 12 O2' G B 16 -51.775 42.918 70.007 0.70 98.87 O
ATOM 13 C1' G B 16 -52.395 44.184 68.053 0.70100.00 C
ATOM 14 N9 G B 16 -53.332 44.126 66.934 0.70100.00 N
ATOM 15 C8 G B 16 -53.006 44.284 65.609 0.70100.00 C
ATOM 16 N7 G B 16 -54.028 44.171 64.809 0.70100.00 N
ATOM 17 C5 G B 16 -55.105 43.924 65.651 0.70100.00 C
ATOM 18 C6 G B 16 -56.473 43.717 65.343 0.70100.00 C
ATOM 19 O6 G B 16 -57.013 43.709 64.235 0.70 99.20 O
ATOM 20 N1 G B 16 -57.234 43.502 66.488 0.70 96.60 N
ATOM 21 C2 G B 16 -56.746 43.486 67.771 0.70 94.91 C
ATOM 22 N2 G B 16 -57.669 43.253 68.731 0.70 85.47 N
ATOM 23 N3 G B 16 -55.461 43.680 68.082 0.70 93.53 N
ATOM 24 C4 G B 16 -54.701 43.892 66.973 0.70100.00 C
ATOM 25 P G B 17 -50.121 39.827 67.540 0.70100.00 P
ATOM 26 OP1 G B 17 -48.668 39.593 67.349 0.70100.00 O
ATOM 27 OP2 G B 17 -51.009 39.862 66.345 0.70100.00 O
ATOM 28 O5' G B 17 -50.691 38.738 68.560 0.70100.00 O
TER

Atoms:
OP1: (-48.668,39.593,67.349)
OP2: (-51.009,39.862,66.345)
C3': (-52.838,37.811,70.338)
C1': (-54.016,39.833,69.995)
C5': (-50.550,38.920,69.971)
O6: (-56.548,40.216,64.547)
O4': (-52.633,40.146,70.130)
C8: (-53.475,40.160,67.540)
C2: (-57.814,39.698,67.838)
C6: (-56.526,40.070,65.778)
C5: (-55.406,40.075,66.652)
C4: (-55.610,39.895,68.005)
P: (-50.121,39.827,67.540)
C4': (-51.913,38.984,70.629)
C2': (-54.216,38.426,70.565)
O2': (-54.562,38.518,71.932)
N1: (-57.714,39.871,66.475)
N2: (-59.051,39.516,68.317)
N3: (-56.776,39.701,68.664)
N7: (-54.056,40.237,66.375)
N9: (-54.353,39.956,68.576)
O5': (-50.691,38.738,68.560)
O3': (-52.537,36.625,71.096)
OP1: (-46.555,45.027,64.794)
OP2: (-48.986,44.932,63.980)
C3': (-51.057,42.268,67.767)
C1': (-52.395,44.184,68.053)
C5': (-49.326,43.495,66.364)
O6: (-57.013,43.709,64.235)
O4': (-51.141,44.599,67.523)
C8: (-53.006,44.284,65.609)
C2: (-56.746,43.486,67.771)
C6: (-56.473,43.717,65.343)
C5: (-55.105,43.924,65.651)
C4: (-54.701,43.892,66.973)
P: (-47.995,45.299,65.027)
C4': (-50.193,43.498,67.594)
C2': (-52.175,42.798,68.654)
O2': (-51.775,42.918,70.007)
N1: (-57.234,43.502,66.488)
N2: (-57.669,43.253,68.731)
N3: (-55.461,43.680,68.082)
N7: (-54.028,44.171,64.809)
N9: (-53.332,44.126,66.934)
O5': (-48.446,44.606,66.385)
O3': (-50.304,41.212,68.346)
Image (generated by PyMOL):
PyMOL image
show in jmol