ClaRNA

Doublet info:

Details

Nucleotide types: GG
Description: None: None
Program used: None
Has errors: False

Source

PDB id: 3F1H:A2466:A2465

Extra

PDB:
ATOM 1 O3' G A2465 -122.082 -45.947 -22.244 1.00 84.66 O
ATOM 2 P G A2466 -122.968 -46.395 -20.982 1.00107.29 P
ATOM 3 OP1 G A2466 -122.059 -46.336 -19.810 1.00106.57 O
ATOM 4 OP2 G A2466 -123.704 -47.649 -21.293 1.00 88.86 O
ATOM 5 O5' G A2466 -124.026 -45.196 -20.834 1.00 80.51 O
ATOM 6 C5' G A2466 -123.517 -43.874 -20.633 1.00 83.94 C
ATOM 7 C4' G A2466 -124.563 -42.883 -20.155 1.00 81.57 C
ATOM 8 O4' G A2466 -125.637 -42.788 -21.124 1.00 89.95 O
ATOM 9 C3' G A2466 -125.253 -43.222 -18.842 1.00 86.22 C
ATOM 10 O3' G A2466 -124.499 -42.749 -17.739 1.00 87.57 O
ATOM 11 C2' G A2466 -126.531 -42.413 -18.994 1.00 93.22 C
ATOM 12 O2' G A2466 -126.293 -41.023 -18.863 1.00 91.05 O
ATOM 13 C1' G A2466 -126.875 -42.728 -20.441 1.00 93.41 C
ATOM 14 N9 G A2466 -127.587 -43.983 -20.688 1.00 98.60 N
ATOM 15 C8 G A2466 -127.114 -45.044 -21.418 1.00 96.80 C
ATOM 16 N7 G A2466 -127.953 -46.035 -21.509 1.00 97.40 N
ATOM 17 C5 G A2466 -129.064 -45.610 -20.796 1.00 94.82 C
ATOM 18 C6 G A2466 -130.292 -46.274 -20.552 1.00102.23 C
ATOM 19 O6 G A2466 -130.647 -47.400 -20.928 1.00110.65 O
ATOM 20 N1 G A2466 -131.156 -45.498 -19.786 1.00 98.22 N
ATOM 21 C2 G A2466 -130.862 -44.240 -19.317 1.00 99.12 C
ATOM 22 N2 G A2466 -131.821 -43.643 -18.595 1.00 98.80 N
ATOM 23 N3 G A2466 -129.713 -43.609 -19.538 1.00 98.60 N
ATOM 24 C4 G A2466 -128.858 -44.348 -20.285 1.00 92.58 C
ATOM 25 P C A2467 -124.486 -43.585 -16.374 1.00111.73 P
ATOM 26 OP1 C A2467 -123.936 -42.699 -15.326 1.00102.66 O
ATOM 27 OP2 C A2467 -123.841 -44.884 -16.655 1.00108.39 O
ATOM 28 O5' C A2467 -126.028 -43.872 -16.048 1.00 95.70 O
TER

ATOM 1 O3' C B2464 -118.699 -45.641 -27.583 1.00 99.80 O
ATOM 2 P G B2465 -118.778 -46.375 -26.166 1.00103.48 P
ATOM 3 OP1 G B2465 -117.956 -45.563 -25.231 1.00 97.76 O
ATOM 4 OP2 G B2465 -118.524 -47.826 -26.363 1.00 90.72 O
ATOM 5 O5' G B2465 -120.309 -46.222 -25.750 1.00 82.39 O
ATOM 6 C5' G B2465 -120.680 -45.061 -25.044 1.00 93.25 C
ATOM 7 C4' G B2465 -122.089 -45.234 -24.534 1.00 88.12 C
ATOM 8 O4' G B2465 -122.925 -45.488 -25.685 1.00 85.90 O
ATOM 9 C3' G B2465 -122.273 -46.408 -23.580 1.00 83.64 C
ATOM 10 O3' G B2465 -122.082 -45.947 -22.244 1.00 84.66 O
ATOM 11 C2' G B2465 -123.704 -46.826 -23.868 1.00 95.94 C
ATOM 12 O2' G B2465 -124.636 -46.116 -23.076 1.00103.58 O
ATOM 13 C1' G B2465 -123.887 -46.457 -25.341 1.00102.07 C
ATOM 14 N9 G B2465 -123.736 -47.602 -26.226 1.00105.93 N
ATOM 15 C8 G B2465 -122.571 -48.201 -26.639 1.00106.05 C
ATOM 16 N7 G B2465 -122.779 -49.214 -27.432 1.00 98.02 N
ATOM 17 C5 G B2465 -124.162 -49.281 -27.542 1.00101.35 C
ATOM 18 C6 G B2465 -124.973 -50.174 -28.265 1.00105.96 C
ATOM 19 O6 G B2465 -124.608 -51.114 -28.979 1.00114.54 O
ATOM 20 N1 G B2465 -126.326 -49.890 -28.101 1.00 99.28 N
ATOM 21 C2 G B2465 -126.833 -48.869 -27.331 1.00100.27 C
ATOM 22 N2 G B2465 -128.165 -48.744 -27.292 1.00103.93 N
ATOM 23 N3 G B2465 -126.085 -48.024 -26.647 1.00 99.13 N
ATOM 24 C4 G B2465 -124.768 -48.296 -26.804 1.00103.71 C
ATOM 25 P G B2466 -122.968 -46.395 -20.982 1.00107.29 P
ATOM 26 OP1 G B2466 -122.059 -46.336 -19.810 1.00106.57 O
ATOM 27 OP2 G B2466 -123.704 -47.649 -21.293 1.00 88.86 O
ATOM 28 O5' G B2466 -124.026 -45.196 -20.834 1.00 80.51 O
TER

Atoms:
OP1: (-122.059,-46.336,-19.810)
OP2: (-123.704,-47.649,-21.293)
C3': (-125.253,-43.222,-18.842)
C1': (-126.875,-42.728,-20.441)
C5': (-123.517,-43.874,-20.633)
O6: (-130.647,-47.400,-20.928)
O4': (-125.637,-42.788,-21.124)
C8: (-127.114,-45.044,-21.418)
C2: (-130.862,-44.240,-19.317)
C6: (-130.292,-46.274,-20.552)
C5: (-129.064,-45.610,-20.796)
C4: (-128.858,-44.348,-20.285)
P: (-122.968,-46.395,-20.982)
C4': (-124.563,-42.883,-20.155)
C2': (-126.531,-42.413,-18.994)
O2': (-126.293,-41.023,-18.863)
N1: (-131.156,-45.498,-19.786)
N2: (-131.821,-43.643,-18.595)
N3: (-129.713,-43.609,-19.538)
N7: (-127.953,-46.035,-21.509)
N9: (-127.587,-43.983,-20.688)
O5': (-124.026,-45.196,-20.834)
O3': (-124.499,-42.749,-17.739)
OP1: (-117.956,-45.563,-25.231)
OP2: (-118.524,-47.826,-26.363)
C3': (-122.273,-46.408,-23.580)
C1': (-123.887,-46.457,-25.341)
C5': (-120.680,-45.061,-25.044)
O6: (-124.608,-51.114,-28.979)
O4': (-122.925,-45.488,-25.685)
C8: (-122.571,-48.201,-26.639)
C2: (-126.833,-48.869,-27.331)
C6: (-124.973,-50.174,-28.265)
C5: (-124.162,-49.281,-27.542)
C4: (-124.768,-48.296,-26.804)
P: (-118.778,-46.375,-26.166)
C4': (-122.089,-45.234,-24.534)
C2': (-123.704,-46.826,-23.868)
O2': (-124.636,-46.116,-23.076)
N1: (-126.326,-49.890,-28.101)
N2: (-128.165,-48.744,-27.292)
N3: (-126.085,-48.024,-26.647)
N7: (-122.779,-49.214,-27.432)
N9: (-123.736,-47.602,-26.226)
O5': (-120.309,-46.222,-25.750)
O3': (-122.082,-45.947,-22.244)
Image (generated by PyMOL):
PyMOL image
show in jmol