Doublet info:
Details
Nucleotide types:
GG
Description:
None: None
Program used:
None
Has errors:
False
Source
PDB id:
1YIJ:02681:02499
Extra
PDB:
ATOM 1 O3' A A2680 41.968 162.636 108.009 1.00 37.33 O
ATOM 2 P G A2681 41.261 163.516 109.149 1.00 38.63 P
ATOM 3 OP1 G A2681 40.523 164.551 108.391 1.00 38.87 O
ATOM 4 OP2 G A2681 42.278 163.926 110.151 1.00 38.09 O
ATOM 5 O5' G A2681 40.210 162.535 109.844 1.00 37.55 O
ATOM 6 C5' G A2681 39.112 161.982 109.094 1.00 36.92 C
ATOM 7 C4' G A2681 38.558 160.738 109.766 1.00 38.28 C
ATOM 8 O4' G A2681 39.599 159.733 109.920 1.00 38.35 O
ATOM 9 C3' G A2681 38.057 160.848 111.198 1.00 37.81 C
ATOM 10 O3' G A2681 36.783 161.470 111.307 1.00 38.31 O
ATOM 11 C2' G A2681 37.941 159.377 111.578 1.00 37.00 C
ATOM 12 O2' G A2681 36.780 158.761 111.071 1.00 39.90 O
ATOM 13 C1' G A2681 39.164 158.782 110.880 1.00 37.53 C
ATOM 14 N9 G A2681 40.207 158.536 111.868 1.00 37.89 N
ATOM 15 C8 G A2681 40.439 157.341 112.501 1.00 37.88 C
ATOM 16 N7 G A2681 41.349 157.421 113.431 1.00 37.54 N
ATOM 17 C5 G A2681 41.765 158.742 113.395 1.00 37.67 C
ATOM 18 C6 G A2681 42.717 159.414 114.186 1.00 38.69 C
ATOM 19 O6 G A2681 43.372 158.974 115.135 1.00 42.04 O
ATOM 20 N1 G A2681 42.866 160.739 113.795 1.00 39.36 N
ATOM 21 C2 G A2681 42.171 161.346 112.785 1.00 39.68 C
ATOM 22 N2 G A2681 42.502 162.622 112.540 1.00 38.29 N
ATOM 23 N3 G A2681 41.235 160.740 112.062 1.00 38.89 N
ATOM 24 C4 G A2681 41.093 159.442 112.414 1.00 38.55 C
ATOM 25 P A A2682 36.428 162.362 112.609 1.00 39.43 P
ATOM 26 OP1 A A2682 34.954 162.585 112.589 1.00 38.80 O
ATOM 27 OP2 A A2682 37.354 163.524 112.636 1.00 37.48 O
ATOM 28 O5' A A2682 36.761 161.443 113.868 1.00 37.39 O
TER
ATOM 1 O3' G B2498 41.285 155.053 117.032 1.00 39.32 O
ATOM 2 P G B2499 39.693 155.225 117.208 1.00 38.14 P
ATOM 3 OP1 G B2499 39.480 156.300 118.197 1.00 40.21 O
ATOM 4 OP2 G B2499 39.090 153.890 117.439 1.00 39.60 O
ATOM 5 O5' G B2499 39.239 155.761 115.778 1.00 39.90 O
ATOM 6 C5' G B2499 37.868 155.711 115.356 1.00 38.26 C
ATOM 7 C4' G B2499 37.790 155.780 113.848 1.00 38.93 C
ATOM 8 O4' G B2499 38.562 154.693 113.267 1.00 39.49 O
ATOM 9 C3' G B2499 36.397 155.608 113.269 1.00 38.79 C
ATOM 10 O3' G B2499 35.692 156.840 113.259 1.00 40.99 O
ATOM 11 C2' G B2499 36.690 155.087 111.872 1.00 37.44 C
ATOM 12 O2' G B2499 37.110 156.120 111.007 1.00 35.41 O
ATOM 13 C1' G B2499 37.867 154.152 112.153 1.00 36.69 C
ATOM 14 N9 G B2499 37.429 152.809 112.517 1.00 36.71 N
ATOM 15 C8 G B2499 37.703 152.138 113.689 1.00 37.53 C
ATOM 16 N7 G B2499 37.160 150.953 113.741 1.00 36.81 N
ATOM 17 C5 G B2499 36.493 150.829 112.530 1.00 36.45 C
ATOM 18 C6 G B2499 35.741 149.759 112.014 1.00 36.30 C
ATOM 19 O6 G B2499 35.494 148.675 112.544 1.00 37.99 O
ATOM 20 N1 G B2499 35.254 150.039 110.742 1.00 36.51 N
ATOM 21 C2 G B2499 35.467 151.208 110.057 1.00 37.53 C
ATOM 22 N2 G B2499 34.915 151.292 108.839 1.00 38.26 N
ATOM 23 N3 G B2499 36.171 152.222 110.530 1.00 37.43 N
ATOM 24 C4 G B2499 36.653 151.965 111.762 1.00 37.08 C
ATOM 25 P U B2500 34.131 156.864 113.630 1.00 40.45 P
ATOM 26 OP1 U B2500 33.736 158.292 113.705 1.00 39.62 O
ATOM 27 OP2 U B2500 33.890 155.975 114.789 1.00 39.69 O
ATOM 28 O5' U B2500 33.440 156.208 112.357 1.00 41.82 O
TER
ATOM 2 P G A2681 41.261 163.516 109.149 1.00 38.63 P
ATOM 3 OP1 G A2681 40.523 164.551 108.391 1.00 38.87 O
ATOM 4 OP2 G A2681 42.278 163.926 110.151 1.00 38.09 O
ATOM 5 O5' G A2681 40.210 162.535 109.844 1.00 37.55 O
ATOM 6 C5' G A2681 39.112 161.982 109.094 1.00 36.92 C
ATOM 7 C4' G A2681 38.558 160.738 109.766 1.00 38.28 C
ATOM 8 O4' G A2681 39.599 159.733 109.920 1.00 38.35 O
ATOM 9 C3' G A2681 38.057 160.848 111.198 1.00 37.81 C
ATOM 10 O3' G A2681 36.783 161.470 111.307 1.00 38.31 O
ATOM 11 C2' G A2681 37.941 159.377 111.578 1.00 37.00 C
ATOM 12 O2' G A2681 36.780 158.761 111.071 1.00 39.90 O
ATOM 13 C1' G A2681 39.164 158.782 110.880 1.00 37.53 C
ATOM 14 N9 G A2681 40.207 158.536 111.868 1.00 37.89 N
ATOM 15 C8 G A2681 40.439 157.341 112.501 1.00 37.88 C
ATOM 16 N7 G A2681 41.349 157.421 113.431 1.00 37.54 N
ATOM 17 C5 G A2681 41.765 158.742 113.395 1.00 37.67 C
ATOM 18 C6 G A2681 42.717 159.414 114.186 1.00 38.69 C
ATOM 19 O6 G A2681 43.372 158.974 115.135 1.00 42.04 O
ATOM 20 N1 G A2681 42.866 160.739 113.795 1.00 39.36 N
ATOM 21 C2 G A2681 42.171 161.346 112.785 1.00 39.68 C
ATOM 22 N2 G A2681 42.502 162.622 112.540 1.00 38.29 N
ATOM 23 N3 G A2681 41.235 160.740 112.062 1.00 38.89 N
ATOM 24 C4 G A2681 41.093 159.442 112.414 1.00 38.55 C
ATOM 25 P A A2682 36.428 162.362 112.609 1.00 39.43 P
ATOM 26 OP1 A A2682 34.954 162.585 112.589 1.00 38.80 O
ATOM 27 OP2 A A2682 37.354 163.524 112.636 1.00 37.48 O
ATOM 28 O5' A A2682 36.761 161.443 113.868 1.00 37.39 O
TER
ATOM 1 O3' G B2498 41.285 155.053 117.032 1.00 39.32 O
ATOM 2 P G B2499 39.693 155.225 117.208 1.00 38.14 P
ATOM 3 OP1 G B2499 39.480 156.300 118.197 1.00 40.21 O
ATOM 4 OP2 G B2499 39.090 153.890 117.439 1.00 39.60 O
ATOM 5 O5' G B2499 39.239 155.761 115.778 1.00 39.90 O
ATOM 6 C5' G B2499 37.868 155.711 115.356 1.00 38.26 C
ATOM 7 C4' G B2499 37.790 155.780 113.848 1.00 38.93 C
ATOM 8 O4' G B2499 38.562 154.693 113.267 1.00 39.49 O
ATOM 9 C3' G B2499 36.397 155.608 113.269 1.00 38.79 C
ATOM 10 O3' G B2499 35.692 156.840 113.259 1.00 40.99 O
ATOM 11 C2' G B2499 36.690 155.087 111.872 1.00 37.44 C
ATOM 12 O2' G B2499 37.110 156.120 111.007 1.00 35.41 O
ATOM 13 C1' G B2499 37.867 154.152 112.153 1.00 36.69 C
ATOM 14 N9 G B2499 37.429 152.809 112.517 1.00 36.71 N
ATOM 15 C8 G B2499 37.703 152.138 113.689 1.00 37.53 C
ATOM 16 N7 G B2499 37.160 150.953 113.741 1.00 36.81 N
ATOM 17 C5 G B2499 36.493 150.829 112.530 1.00 36.45 C
ATOM 18 C6 G B2499 35.741 149.759 112.014 1.00 36.30 C
ATOM 19 O6 G B2499 35.494 148.675 112.544 1.00 37.99 O
ATOM 20 N1 G B2499 35.254 150.039 110.742 1.00 36.51 N
ATOM 21 C2 G B2499 35.467 151.208 110.057 1.00 37.53 C
ATOM 22 N2 G B2499 34.915 151.292 108.839 1.00 38.26 N
ATOM 23 N3 G B2499 36.171 152.222 110.530 1.00 37.43 N
ATOM 24 C4 G B2499 36.653 151.965 111.762 1.00 37.08 C
ATOM 25 P U B2500 34.131 156.864 113.630 1.00 40.45 P
ATOM 26 OP1 U B2500 33.736 158.292 113.705 1.00 39.62 O
ATOM 27 OP2 U B2500 33.890 155.975 114.789 1.00 39.69 O
ATOM 28 O5' U B2500 33.440 156.208 112.357 1.00 41.82 O
TER
Atoms:
OP1: (40.523,164.551,108.391)
OP2: (42.278,163.926,110.151)
C3': (38.057,160.848,111.198)
C1': (39.164,158.782,110.880)
C5': (39.112,161.982,109.094)
O6: (43.372,158.974,115.135)
O4': (39.599,159.733,109.920)
C8: (40.439,157.341,112.501)
C2: (42.171,161.346,112.785)
C6: (42.717,159.414,114.186)
C5: (41.765,158.742,113.395)
C4: (41.093,159.442,112.414)
P: (41.261,163.516,109.149)
C4': (38.558,160.738,109.766)
C2': (37.941,159.377,111.578)
O2': (36.780,158.761,111.071)
N1: (42.866,160.739,113.795)
N2: (42.502,162.622,112.540)
N3: (41.235,160.740,112.062)
N7: (41.349,157.421,113.431)
N9: (40.207,158.536,111.868)
O5': (40.210,162.535,109.844)
O3': (36.783,161.470,111.307)
OP2: (42.278,163.926,110.151)
C3': (38.057,160.848,111.198)
C1': (39.164,158.782,110.880)
C5': (39.112,161.982,109.094)
O6: (43.372,158.974,115.135)
O4': (39.599,159.733,109.920)
C8: (40.439,157.341,112.501)
C2: (42.171,161.346,112.785)
C6: (42.717,159.414,114.186)
C5: (41.765,158.742,113.395)
C4: (41.093,159.442,112.414)
P: (41.261,163.516,109.149)
C4': (38.558,160.738,109.766)
C2': (37.941,159.377,111.578)
O2': (36.780,158.761,111.071)
N1: (42.866,160.739,113.795)
N2: (42.502,162.622,112.540)
N3: (41.235,160.740,112.062)
N7: (41.349,157.421,113.431)
N9: (40.207,158.536,111.868)
O5': (40.210,162.535,109.844)
O3': (36.783,161.470,111.307)
OP1: (39.480,156.300,118.197)
OP2: (39.090,153.890,117.439)
C3': (36.397,155.608,113.269)
C1': (37.867,154.152,112.153)
C5': (37.868,155.711,115.356)
O6: (35.494,148.675,112.544)
O4': (38.562,154.693,113.267)
C8: (37.703,152.138,113.689)
C2: (35.467,151.208,110.057)
C6: (35.741,149.759,112.014)
C5: (36.493,150.829,112.530)
C4: (36.653,151.965,111.762)
P: (39.693,155.225,117.208)
C4': (37.790,155.780,113.848)
C2': (36.690,155.087,111.872)
O2': (37.110,156.120,111.007)
N1: (35.254,150.039,110.742)
N2: (34.915,151.292,108.839)
N3: (36.171,152.222,110.530)
N7: (37.160,150.953,113.741)
N9: (37.429,152.809,112.517)
O5': (39.239,155.761,115.778)
O3': (35.692,156.840,113.259)
OP2: (39.090,153.890,117.439)
C3': (36.397,155.608,113.269)
C1': (37.867,154.152,112.153)
C5': (37.868,155.711,115.356)
O6: (35.494,148.675,112.544)
O4': (38.562,154.693,113.267)
C8: (37.703,152.138,113.689)
C2: (35.467,151.208,110.057)
C6: (35.741,149.759,112.014)
C5: (36.493,150.829,112.530)
C4: (36.653,151.965,111.762)
P: (39.693,155.225,117.208)
C4': (37.790,155.780,113.848)
C2': (36.690,155.087,111.872)
O2': (37.110,156.120,111.007)
N1: (35.254,150.039,110.742)
N2: (34.915,151.292,108.839)
N3: (36.171,152.222,110.530)
N7: (37.160,150.953,113.741)
N9: (37.429,152.809,112.517)
O5': (39.239,155.761,115.778)
O3': (35.692,156.840,113.259)
Image (generated by PyMOL):