ClaRNA

Doublet info:

Details

Nucleotide types: GG
Description: None: None
Program used: None
Has errors: False

Source

PDB id: 3OHJ:A1567:A1566

Extra

PDB:
ATOM 1 O3' G A1566 22.000 -41.469 0.092 1.00 43.96 O
ATOM 2 P G A1567 22.238 -40.288 1.145 1.00 52.38 P
ATOM 3 OP1 G A1567 22.410 -39.011 0.360 1.00 45.55 O
ATOM 4 OP2 G A1567 23.333 -40.735 2.055 1.00 52.82 O
ATOM 5 O5' G A1567 20.863 -40.264 1.946 1.00 50.56 O
ATOM 6 C5' G A1567 19.621 -40.234 1.264 1.00 46.70 C
ATOM 7 C4' G A1567 18.582 -41.039 1.984 1.00 42.03 C
ATOM 8 O4' G A1567 18.813 -42.447 1.736 1.00 41.60 O
ATOM 9 C3' G A1567 18.589 -40.933 3.498 1.00 44.73 C
ATOM 10 O3' G A1567 17.937 -39.776 3.985 1.00 43.82 O
ATOM 11 C2' G A1567 17.922 -42.233 3.909 1.00 42.63 C
ATOM 12 O2' G A1567 16.524 -42.173 3.656 1.00 46.46 O
ATOM 13 C1' G A1567 18.541 -43.195 2.898 1.00 45.36 C
ATOM 14 N9 G A1567 19.817 -43.758 3.369 1.00 44.52 N
ATOM 15 C8 G A1567 20.986 -43.583 2.684 1.00 44.05 C
ATOM 16 N7 G A1567 22.017 -44.136 3.259 1.00 47.61 N
ATOM 17 C5 G A1567 21.494 -44.727 4.386 1.00 42.46 C
ATOM 18 C6 G A1567 22.150 -45.465 5.387 1.00 41.85 C
ATOM 19 O6 G A1567 23.337 -45.751 5.472 1.00 46.50 O
ATOM 20 N1 G A1567 21.281 -45.866 6.374 1.00 38.32 N
ATOM 21 C2 G A1567 19.948 -45.596 6.388 1.00 39.70 C
ATOM 22 N2 G A1567 19.281 -46.086 7.423 1.00 42.76 N
ATOM 23 N3 G A1567 19.312 -44.914 5.465 1.00 45.32 N
ATOM 24 C4 G A1567 20.139 -44.503 4.485 1.00 44.91 C
ATOM 25 P G A1568 18.533 -38.988 5.253 1.00 44.75 P
ATOM 26 OP1 G A1568 17.657 -37.818 5.515 1.00 43.94 O
ATOM 27 OP2 G A1568 19.974 -38.746 4.965 1.00 44.56 O
ATOM 28 O5' G A1568 18.369 -40.039 6.421 1.00 35.40 O
TER

ATOM 1 O3' C B1565 20.308 -39.152 -5.074 1.00 51.58 O
ATOM 2 P G B1566 20.921 -38.357 -3.835 1.00 53.21 P
ATOM 3 OP1 G B1566 19.785 -37.751 -3.092 1.00 67.68 O
ATOM 4 OP2 G B1566 21.990 -37.466 -4.366 1.00 56.75 O
ATOM 5 O5' G B1566 21.551 -39.537 -2.985 1.00 49.40 O
ATOM 6 C5' G B1566 20.809 -40.725 -2.764 1.00 42.14 C
ATOM 7 C4' G B1566 21.689 -41.834 -2.273 1.00 43.89 C
ATOM 8 O4' G B1566 22.552 -42.294 -3.342 1.00 48.46 O
ATOM 9 C3' G B1566 22.637 -41.458 -1.163 1.00 36.60 C
ATOM 10 O3' G B1566 22.000 -41.469 0.092 1.00 43.96 O
ATOM 11 C2' G B1566 23.746 -42.493 -1.304 1.00 35.28 C
ATOM 12 O2' G B1566 23.365 -43.730 -0.724 1.00 37.39 O
ATOM 13 C1' G B1566 23.803 -42.671 -2.824 1.00 41.92 C
ATOM 14 N9 G B1566 24.834 -41.822 -3.447 1.00 39.18 N
ATOM 15 C8 G B1566 24.682 -40.527 -3.832 1.00 40.30 C
ATOM 16 N7 G B1566 25.759 -40.013 -4.352 1.00 42.05 N
ATOM 17 C5 G B1566 26.669 -41.035 -4.304 1.00 36.73 C
ATOM 18 C6 G B1566 28.005 -41.054 -4.723 1.00 37.06 C
ATOM 19 O6 G B1566 28.673 -40.158 -5.248 1.00 44.57 O
ATOM 20 N1 G B1566 28.571 -42.285 -4.477 1.00 36.69 N
ATOM 21 C2 G B1566 27.950 -43.361 -3.925 1.00 32.32 C
ATOM 22 N2 G B1566 28.683 -44.468 -3.802 1.00 29.60 N
ATOM 23 N3 G B1566 26.705 -43.353 -3.537 1.00 36.66 N
ATOM 24 C4 G B1566 26.126 -42.161 -3.753 1.00 37.36 C
ATOM 25 P G B1567 22.238 -40.288 1.145 1.00 52.38 P
ATOM 26 OP1 G B1567 22.410 -39.011 0.360 1.00 45.55 O
ATOM 27 OP2 G B1567 23.333 -40.735 2.055 1.00 52.82 O
ATOM 28 O5' G B1567 20.863 -40.264 1.946 1.00 50.56 O
TER

Atoms:
OP1: (22.410,-39.011,0.360)
OP2: (23.333,-40.735,2.055)
C3': (18.589,-40.933,3.498)
C1': (18.541,-43.195,2.898)
C5': (19.621,-40.234,1.264)
O6: (23.337,-45.751,5.472)
O4': (18.813,-42.447,1.736)
C8: (20.986,-43.583,2.684)
C2: (19.948,-45.596,6.388)
C6: (22.150,-45.465,5.387)
C5: (21.494,-44.727,4.386)
C4: (20.139,-44.503,4.485)
P: (22.238,-40.288,1.145)
C4': (18.582,-41.039,1.984)
C2': (17.922,-42.233,3.909)
O2': (16.524,-42.173,3.656)
N1: (21.281,-45.866,6.374)
N2: (19.281,-46.086,7.423)
N3: (19.312,-44.914,5.465)
N7: (22.017,-44.136,3.259)
N9: (19.817,-43.758,3.369)
O5': (20.863,-40.264,1.946)
O3': (17.937,-39.776,3.985)
OP1: (19.785,-37.751,-3.092)
OP2: (21.990,-37.466,-4.366)
C3': (22.637,-41.458,-1.163)
C1': (23.803,-42.671,-2.824)
C5': (20.809,-40.725,-2.764)
O6: (28.673,-40.158,-5.248)
O4': (22.552,-42.294,-3.342)
C8: (24.682,-40.527,-3.832)
C2: (27.950,-43.361,-3.925)
C6: (28.005,-41.054,-4.723)
C5: (26.669,-41.035,-4.304)
C4: (26.126,-42.161,-3.753)
P: (20.921,-38.357,-3.835)
C4': (21.689,-41.834,-2.273)
C2': (23.746,-42.493,-1.304)
O2': (23.365,-43.730,-0.724)
N1: (28.571,-42.285,-4.477)
N2: (28.683,-44.468,-3.802)
N3: (26.705,-43.353,-3.537)
N7: (25.759,-40.013,-4.352)
N9: (24.834,-41.822,-3.447)
O5': (21.551,-39.537,-2.985)
O3': (22.000,-41.469,0.092)
Image (generated by PyMOL):
PyMOL image
show in jmol