Doublet info:
Details
Nucleotide types:
GG
Description:
None: None
Program used:
None
Has errors:
False
Source
PDB id:
1YJN:02681:02499
Extra
PDB:
ATOM 1 O3' A A2680 41.967 162.608 107.908 1.00 41.66 O
ATOM 2 P G A2681 41.296 163.475 109.079 1.00 43.57 P
ATOM 3 OP1 G A2681 40.521 164.505 108.348 1.00 45.05 O
ATOM 4 OP2 G A2681 42.334 163.900 110.048 1.00 41.36 O
ATOM 5 O5' G A2681 40.296 162.463 109.804 1.00 42.50 O
ATOM 6 C5' G A2681 39.125 161.980 109.125 1.00 42.78 C
ATOM 7 C4' G A2681 38.579 160.725 109.782 1.00 44.47 C
ATOM 8 O4' G A2681 39.614 159.712 109.901 1.00 44.76 O
ATOM 9 C3' G A2681 38.091 160.798 111.216 1.00 44.94 C
ATOM 10 O3' G A2681 36.826 161.433 111.334 1.00 48.04 O
ATOM 11 C2' G A2681 37.955 159.314 111.540 1.00 44.43 C
ATOM 12 O2' G A2681 36.791 158.738 110.983 1.00 44.27 O
ATOM 13 C1' G A2681 39.186 158.735 110.838 1.00 44.47 C
ATOM 14 N9 G A2681 40.242 158.482 111.814 1.00 45.07 N
ATOM 15 C8 G A2681 40.492 157.290 112.450 1.00 44.15 C
ATOM 16 N7 G A2681 41.419 157.379 113.361 1.00 42.37 N
ATOM 17 C5 G A2681 41.826 158.701 113.308 1.00 44.39 C
ATOM 18 C6 G A2681 42.792 159.384 114.070 1.00 45.60 C
ATOM 19 O6 G A2681 43.490 158.949 114.989 1.00 48.50 O
ATOM 20 N1 G A2681 42.907 160.714 113.680 1.00 46.19 N
ATOM 21 C2 G A2681 42.178 161.309 112.684 1.00 46.20 C
ATOM 22 N2 G A2681 42.450 162.594 112.441 1.00 46.32 N
ATOM 23 N3 G A2681 41.256 160.685 111.975 1.00 46.63 N
ATOM 24 C4 G A2681 41.133 159.390 112.337 1.00 45.67 C
ATOM 25 P A A2682 36.510 162.368 112.608 1.00 49.61 P
ATOM 26 OP1 A A2682 35.037 162.570 112.607 1.00 48.93 O
ATOM 27 OP2 A A2682 37.417 163.545 112.544 1.00 48.97 O
ATOM 28 O5' A A2682 36.879 161.482 113.881 1.00 46.77 O
TER
ATOM 1 O3' G B2498 41.442 154.980 116.869 1.00 40.79 O
ATOM 2 P G B2499 39.857 155.157 117.100 1.00 41.34 P
ATOM 3 OP1 G B2499 39.677 156.126 118.212 1.00 40.25 O
ATOM 4 OP2 G B2499 39.238 153.812 117.192 1.00 41.23 O
ATOM 5 O5' G B2499 39.365 155.845 115.749 1.00 40.84 O
ATOM 6 C5' G B2499 37.983 155.815 115.347 1.00 39.90 C
ATOM 7 C4' G B2499 37.880 155.808 113.839 1.00 40.00 C
ATOM 8 O4' G B2499 38.591 154.656 113.313 1.00 39.88 O
ATOM 9 C3' G B2499 36.474 155.645 113.293 1.00 41.03 C
ATOM 10 O3' G B2499 35.769 156.872 113.250 1.00 42.27 O
ATOM 11 C2' G B2499 36.721 155.062 111.912 1.00 39.66 C
ATOM 12 O2' G B2499 37.133 156.040 110.989 1.00 40.60 O
ATOM 13 C1' G B2499 37.889 154.122 112.200 1.00 39.24 C
ATOM 14 N9 G B2499 37.459 152.765 112.533 1.00 39.03 N
ATOM 15 C8 G B2499 37.755 152.050 113.668 1.00 38.18 C
ATOM 16 N7 G B2499 37.238 150.852 113.667 1.00 37.52 N
ATOM 17 C5 G B2499 36.560 150.772 112.463 1.00 37.37 C
ATOM 18 C6 G B2499 35.836 149.707 111.898 1.00 37.80 C
ATOM 19 O6 G B2499 35.641 148.589 112.359 1.00 40.33 O
ATOM 20 N1 G B2499 35.320 150.039 110.655 1.00 38.64 N
ATOM 21 C2 G B2499 35.489 151.247 110.031 1.00 41.38 C
ATOM 22 N2 G B2499 34.918 151.379 108.823 1.00 43.58 N
ATOM 23 N3 G B2499 36.170 152.254 110.547 1.00 40.57 N
ATOM 24 C4 G B2499 36.678 151.946 111.755 1.00 38.80 C
ATOM 25 P U B2500 34.197 156.886 113.561 1.00 43.08 P
ATOM 26 OP1 U B2500 33.792 158.310 113.647 1.00 41.43 O
ATOM 27 OP2 U B2500 33.930 155.977 114.703 1.00 41.90 O
ATOM 28 O5' U B2500 33.552 156.223 112.269 1.00 42.06 O
TER
ATOM 2 P G A2681 41.296 163.475 109.079 1.00 43.57 P
ATOM 3 OP1 G A2681 40.521 164.505 108.348 1.00 45.05 O
ATOM 4 OP2 G A2681 42.334 163.900 110.048 1.00 41.36 O
ATOM 5 O5' G A2681 40.296 162.463 109.804 1.00 42.50 O
ATOM 6 C5' G A2681 39.125 161.980 109.125 1.00 42.78 C
ATOM 7 C4' G A2681 38.579 160.725 109.782 1.00 44.47 C
ATOM 8 O4' G A2681 39.614 159.712 109.901 1.00 44.76 O
ATOM 9 C3' G A2681 38.091 160.798 111.216 1.00 44.94 C
ATOM 10 O3' G A2681 36.826 161.433 111.334 1.00 48.04 O
ATOM 11 C2' G A2681 37.955 159.314 111.540 1.00 44.43 C
ATOM 12 O2' G A2681 36.791 158.738 110.983 1.00 44.27 O
ATOM 13 C1' G A2681 39.186 158.735 110.838 1.00 44.47 C
ATOM 14 N9 G A2681 40.242 158.482 111.814 1.00 45.07 N
ATOM 15 C8 G A2681 40.492 157.290 112.450 1.00 44.15 C
ATOM 16 N7 G A2681 41.419 157.379 113.361 1.00 42.37 N
ATOM 17 C5 G A2681 41.826 158.701 113.308 1.00 44.39 C
ATOM 18 C6 G A2681 42.792 159.384 114.070 1.00 45.60 C
ATOM 19 O6 G A2681 43.490 158.949 114.989 1.00 48.50 O
ATOM 20 N1 G A2681 42.907 160.714 113.680 1.00 46.19 N
ATOM 21 C2 G A2681 42.178 161.309 112.684 1.00 46.20 C
ATOM 22 N2 G A2681 42.450 162.594 112.441 1.00 46.32 N
ATOM 23 N3 G A2681 41.256 160.685 111.975 1.00 46.63 N
ATOM 24 C4 G A2681 41.133 159.390 112.337 1.00 45.67 C
ATOM 25 P A A2682 36.510 162.368 112.608 1.00 49.61 P
ATOM 26 OP1 A A2682 35.037 162.570 112.607 1.00 48.93 O
ATOM 27 OP2 A A2682 37.417 163.545 112.544 1.00 48.97 O
ATOM 28 O5' A A2682 36.879 161.482 113.881 1.00 46.77 O
TER
ATOM 1 O3' G B2498 41.442 154.980 116.869 1.00 40.79 O
ATOM 2 P G B2499 39.857 155.157 117.100 1.00 41.34 P
ATOM 3 OP1 G B2499 39.677 156.126 118.212 1.00 40.25 O
ATOM 4 OP2 G B2499 39.238 153.812 117.192 1.00 41.23 O
ATOM 5 O5' G B2499 39.365 155.845 115.749 1.00 40.84 O
ATOM 6 C5' G B2499 37.983 155.815 115.347 1.00 39.90 C
ATOM 7 C4' G B2499 37.880 155.808 113.839 1.00 40.00 C
ATOM 8 O4' G B2499 38.591 154.656 113.313 1.00 39.88 O
ATOM 9 C3' G B2499 36.474 155.645 113.293 1.00 41.03 C
ATOM 10 O3' G B2499 35.769 156.872 113.250 1.00 42.27 O
ATOM 11 C2' G B2499 36.721 155.062 111.912 1.00 39.66 C
ATOM 12 O2' G B2499 37.133 156.040 110.989 1.00 40.60 O
ATOM 13 C1' G B2499 37.889 154.122 112.200 1.00 39.24 C
ATOM 14 N9 G B2499 37.459 152.765 112.533 1.00 39.03 N
ATOM 15 C8 G B2499 37.755 152.050 113.668 1.00 38.18 C
ATOM 16 N7 G B2499 37.238 150.852 113.667 1.00 37.52 N
ATOM 17 C5 G B2499 36.560 150.772 112.463 1.00 37.37 C
ATOM 18 C6 G B2499 35.836 149.707 111.898 1.00 37.80 C
ATOM 19 O6 G B2499 35.641 148.589 112.359 1.00 40.33 O
ATOM 20 N1 G B2499 35.320 150.039 110.655 1.00 38.64 N
ATOM 21 C2 G B2499 35.489 151.247 110.031 1.00 41.38 C
ATOM 22 N2 G B2499 34.918 151.379 108.823 1.00 43.58 N
ATOM 23 N3 G B2499 36.170 152.254 110.547 1.00 40.57 N
ATOM 24 C4 G B2499 36.678 151.946 111.755 1.00 38.80 C
ATOM 25 P U B2500 34.197 156.886 113.561 1.00 43.08 P
ATOM 26 OP1 U B2500 33.792 158.310 113.647 1.00 41.43 O
ATOM 27 OP2 U B2500 33.930 155.977 114.703 1.00 41.90 O
ATOM 28 O5' U B2500 33.552 156.223 112.269 1.00 42.06 O
TER
Atoms:
OP1: (40.521,164.505,108.348)
OP2: (42.334,163.900,110.048)
C3': (38.091,160.798,111.216)
C1': (39.186,158.735,110.838)
C5': (39.125,161.980,109.125)
O6: (43.490,158.949,114.989)
O4': (39.614,159.712,109.901)
C8: (40.492,157.290,112.450)
C2: (42.178,161.309,112.684)
C6: (42.792,159.384,114.070)
C5: (41.826,158.701,113.308)
C4: (41.133,159.390,112.337)
P: (41.296,163.475,109.079)
C4': (38.579,160.725,109.782)
C2': (37.955,159.314,111.540)
O2': (36.791,158.738,110.983)
N1: (42.907,160.714,113.680)
N2: (42.450,162.594,112.441)
N3: (41.256,160.685,111.975)
N7: (41.419,157.379,113.361)
N9: (40.242,158.482,111.814)
O5': (40.296,162.463,109.804)
O3': (36.826,161.433,111.334)
OP2: (42.334,163.900,110.048)
C3': (38.091,160.798,111.216)
C1': (39.186,158.735,110.838)
C5': (39.125,161.980,109.125)
O6: (43.490,158.949,114.989)
O4': (39.614,159.712,109.901)
C8: (40.492,157.290,112.450)
C2: (42.178,161.309,112.684)
C6: (42.792,159.384,114.070)
C5: (41.826,158.701,113.308)
C4: (41.133,159.390,112.337)
P: (41.296,163.475,109.079)
C4': (38.579,160.725,109.782)
C2': (37.955,159.314,111.540)
O2': (36.791,158.738,110.983)
N1: (42.907,160.714,113.680)
N2: (42.450,162.594,112.441)
N3: (41.256,160.685,111.975)
N7: (41.419,157.379,113.361)
N9: (40.242,158.482,111.814)
O5': (40.296,162.463,109.804)
O3': (36.826,161.433,111.334)
OP1: (39.677,156.126,118.212)
OP2: (39.238,153.812,117.192)
C3': (36.474,155.645,113.293)
C1': (37.889,154.122,112.200)
C5': (37.983,155.815,115.347)
O6: (35.641,148.589,112.359)
O4': (38.591,154.656,113.313)
C8: (37.755,152.050,113.668)
C2: (35.489,151.247,110.031)
C6: (35.836,149.707,111.898)
C5: (36.560,150.772,112.463)
C4: (36.678,151.946,111.755)
P: (39.857,155.157,117.100)
C4': (37.880,155.808,113.839)
C2': (36.721,155.062,111.912)
O2': (37.133,156.040,110.989)
N1: (35.320,150.039,110.655)
N2: (34.918,151.379,108.823)
N3: (36.170,152.254,110.547)
N7: (37.238,150.852,113.667)
N9: (37.459,152.765,112.533)
O5': (39.365,155.845,115.749)
O3': (35.769,156.872,113.250)
OP2: (39.238,153.812,117.192)
C3': (36.474,155.645,113.293)
C1': (37.889,154.122,112.200)
C5': (37.983,155.815,115.347)
O6: (35.641,148.589,112.359)
O4': (38.591,154.656,113.313)
C8: (37.755,152.050,113.668)
C2: (35.489,151.247,110.031)
C6: (35.836,149.707,111.898)
C5: (36.560,150.772,112.463)
C4: (36.678,151.946,111.755)
P: (39.857,155.157,117.100)
C4': (37.880,155.808,113.839)
C2': (36.721,155.062,111.912)
O2': (37.133,156.040,110.989)
N1: (35.320,150.039,110.655)
N2: (34.918,151.379,108.823)
N3: (36.170,152.254,110.547)
N7: (37.238,150.852,113.667)
N9: (37.459,152.765,112.533)
O5': (39.365,155.845,115.749)
O3': (35.769,156.872,113.250)
Image (generated by PyMOL):