Doublet info:
Details
Nucleotide types:
UC
Description:
None: None
Program used:
None
Has errors:
False
Source
PDB id:
1YIT:01342:01343
Extra
PDB:
ATOM 1 O3' G A1341 58.642 177.347 94.164 1.00 35.81 O
ATOM 2 P U A1342 57.199 177.970 93.855 1.00 40.08 P
ATOM 3 OP1 U A1342 56.216 177.190 94.647 1.00 39.19 O
ATOM 4 OP2 U A1342 57.016 178.109 92.385 1.00 38.60 O
ATOM 5 O5' U A1342 57.275 179.427 94.490 1.00 42.00 O
ATOM 6 C5' U A1342 57.449 179.611 95.908 1.00 41.19 C
ATOM 7 C4' U A1342 57.712 181.067 96.213 1.00 42.72 C
ATOM 8 O4' U A1342 59.000 181.469 95.668 1.00 42.68 O
ATOM 9 C3' U A1342 56.731 182.038 95.587 1.00 41.88 C
ATOM 10 O3' U A1342 55.538 182.138 96.348 1.00 41.05 O
ATOM 11 C2' U A1342 57.532 183.332 95.537 1.00 41.21 C
ATOM 12 O2' U A1342 57.595 184.000 96.778 1.00 40.48 O
ATOM 13 C1' U A1342 58.927 182.806 95.201 1.00 41.81 C
ATOM 14 N1 U A1342 59.230 182.816 93.761 1.00 44.16 N
ATOM 15 C2 U A1342 59.750 183.981 93.215 1.00 43.94 C
ATOM 16 O2 U A1342 59.950 184.990 93.862 1.00 44.36 O
ATOM 17 N3 U A1342 60.027 183.917 91.874 1.00 44.37 N
ATOM 18 C4 U A1342 59.847 182.836 91.038 1.00 45.01 C
ATOM 19 O4 U A1342 60.171 182.931 89.853 1.00 46.09 O
ATOM 20 C5 U A1342 59.301 181.673 91.670 1.00 44.35 C
ATOM 21 C6 U A1342 59.016 181.702 92.974 1.00 43.86 C
ATOM 22 P C A1343 54.220 182.737 95.663 1.00 44.81 P
ATOM 23 OP1 C A1343 53.099 182.599 96.622 1.00 45.05 O
ATOM 24 OP2 C A1343 54.091 182.185 94.286 1.00 45.41 O
ATOM 25 O5' C A1343 54.540 184.284 95.496 1.00 47.46 O
TER
ATOM 1 O3' U B1342 55.538 182.138 96.348 1.00 41.05 O
ATOM 2 P C B1343 54.220 182.737 95.663 1.00 44.81 P
ATOM 3 OP1 C B1343 53.099 182.599 96.622 1.00 45.05 O
ATOM 4 OP2 C B1343 54.091 182.185 94.286 1.00 45.41 O
ATOM 5 O5' C B1343 54.540 184.284 95.496 1.00 47.46 O
ATOM 6 C5' C B1343 54.639 185.153 96.637 1.00 49.01 C
ATOM 7 C4' C B1343 54.811 186.573 96.175 1.00 49.85 C
ATOM 8 O4' C B1343 56.112 186.729 95.550 1.00 49.44 O
ATOM 9 C3' C B1343 53.819 186.990 95.102 1.00 49.98 C
ATOM 10 O3' C B1343 52.566 187.365 95.681 1.00 51.06 O
ATOM 11 C2' C B1343 54.565 188.114 94.393 1.00 49.85 C
ATOM 12 O2' C B1343 54.541 189.334 95.102 1.00 51.95 O
ATOM 13 C1' C B1343 56.000 187.586 94.428 1.00 49.38 C
ATOM 14 N1 C B1343 56.379 186.832 93.223 1.00 48.52 N
ATOM 15 C2 C B1343 57.087 187.489 92.217 1.00 48.04 C
ATOM 16 O2 C B1343 57.370 188.681 92.367 1.00 49.37 O
ATOM 17 N3 C B1343 57.447 186.810 91.107 1.00 47.67 N
ATOM 18 C4 C B1343 57.127 185.522 90.982 1.00 48.38 C
ATOM 19 N4 C B1343 57.505 184.890 89.871 1.00 48.11 N
ATOM 20 C5 C B1343 56.405 184.825 91.991 1.00 49.34 C
ATOM 21 C6 C B1343 56.052 185.512 93.084 1.00 49.25 C
ATOM 22 P G B1344 51.313 187.697 94.732 1.00 50.01 P
ATOM 23 OP1 G B1344 50.098 187.832 95.575 1.00 47.57 O
ATOM 24 OP2 G B1344 51.324 186.715 93.615 1.00 49.98 O
ATOM 25 O5' G B1344 51.675 189.137 94.159 1.00 49.51 O
TER
ATOM 2 P U A1342 57.199 177.970 93.855 1.00 40.08 P
ATOM 3 OP1 U A1342 56.216 177.190 94.647 1.00 39.19 O
ATOM 4 OP2 U A1342 57.016 178.109 92.385 1.00 38.60 O
ATOM 5 O5' U A1342 57.275 179.427 94.490 1.00 42.00 O
ATOM 6 C5' U A1342 57.449 179.611 95.908 1.00 41.19 C
ATOM 7 C4' U A1342 57.712 181.067 96.213 1.00 42.72 C
ATOM 8 O4' U A1342 59.000 181.469 95.668 1.00 42.68 O
ATOM 9 C3' U A1342 56.731 182.038 95.587 1.00 41.88 C
ATOM 10 O3' U A1342 55.538 182.138 96.348 1.00 41.05 O
ATOM 11 C2' U A1342 57.532 183.332 95.537 1.00 41.21 C
ATOM 12 O2' U A1342 57.595 184.000 96.778 1.00 40.48 O
ATOM 13 C1' U A1342 58.927 182.806 95.201 1.00 41.81 C
ATOM 14 N1 U A1342 59.230 182.816 93.761 1.00 44.16 N
ATOM 15 C2 U A1342 59.750 183.981 93.215 1.00 43.94 C
ATOM 16 O2 U A1342 59.950 184.990 93.862 1.00 44.36 O
ATOM 17 N3 U A1342 60.027 183.917 91.874 1.00 44.37 N
ATOM 18 C4 U A1342 59.847 182.836 91.038 1.00 45.01 C
ATOM 19 O4 U A1342 60.171 182.931 89.853 1.00 46.09 O
ATOM 20 C5 U A1342 59.301 181.673 91.670 1.00 44.35 C
ATOM 21 C6 U A1342 59.016 181.702 92.974 1.00 43.86 C
ATOM 22 P C A1343 54.220 182.737 95.663 1.00 44.81 P
ATOM 23 OP1 C A1343 53.099 182.599 96.622 1.00 45.05 O
ATOM 24 OP2 C A1343 54.091 182.185 94.286 1.00 45.41 O
ATOM 25 O5' C A1343 54.540 184.284 95.496 1.00 47.46 O
TER
ATOM 1 O3' U B1342 55.538 182.138 96.348 1.00 41.05 O
ATOM 2 P C B1343 54.220 182.737 95.663 1.00 44.81 P
ATOM 3 OP1 C B1343 53.099 182.599 96.622 1.00 45.05 O
ATOM 4 OP2 C B1343 54.091 182.185 94.286 1.00 45.41 O
ATOM 5 O5' C B1343 54.540 184.284 95.496 1.00 47.46 O
ATOM 6 C5' C B1343 54.639 185.153 96.637 1.00 49.01 C
ATOM 7 C4' C B1343 54.811 186.573 96.175 1.00 49.85 C
ATOM 8 O4' C B1343 56.112 186.729 95.550 1.00 49.44 O
ATOM 9 C3' C B1343 53.819 186.990 95.102 1.00 49.98 C
ATOM 10 O3' C B1343 52.566 187.365 95.681 1.00 51.06 O
ATOM 11 C2' C B1343 54.565 188.114 94.393 1.00 49.85 C
ATOM 12 O2' C B1343 54.541 189.334 95.102 1.00 51.95 O
ATOM 13 C1' C B1343 56.000 187.586 94.428 1.00 49.38 C
ATOM 14 N1 C B1343 56.379 186.832 93.223 1.00 48.52 N
ATOM 15 C2 C B1343 57.087 187.489 92.217 1.00 48.04 C
ATOM 16 O2 C B1343 57.370 188.681 92.367 1.00 49.37 O
ATOM 17 N3 C B1343 57.447 186.810 91.107 1.00 47.67 N
ATOM 18 C4 C B1343 57.127 185.522 90.982 1.00 48.38 C
ATOM 19 N4 C B1343 57.505 184.890 89.871 1.00 48.11 N
ATOM 20 C5 C B1343 56.405 184.825 91.991 1.00 49.34 C
ATOM 21 C6 C B1343 56.052 185.512 93.084 1.00 49.25 C
ATOM 22 P G B1344 51.313 187.697 94.732 1.00 50.01 P
ATOM 23 OP1 G B1344 50.098 187.832 95.575 1.00 47.57 O
ATOM 24 OP2 G B1344 51.324 186.715 93.615 1.00 49.98 O
ATOM 25 O5' G B1344 51.675 189.137 94.159 1.00 49.51 O
TER
Atoms:
C4: (59.847,182.836,91.038)
N3: (60.027,183.917,91.874)
OP1: (56.216,177.190,94.647)
OP2: (57.016,178.109,92.385)
C2: (59.750,183.981,93.215)
C1': (58.927,182.806,95.201)
C3': (56.731,182.038,95.587)
O5': (57.275,179.427,94.490)
O4': (59.000,181.469,95.668)
C5': (57.449,179.611,95.908)
P: (57.199,177.970,93.855)
C4': (57.712,181.067,96.213)
C2': (57.532,183.332,95.537)
O2': (57.595,184.000,96.778)
N1: (59.230,182.816,93.761)
O4: (60.171,182.931,89.853)
O2: (59.950,184.990,93.862)
C6: (59.016,181.702,92.974)
C5: (59.301,181.673,91.670)
O3': (55.538,182.138,96.348)
N3: (60.027,183.917,91.874)
OP1: (56.216,177.190,94.647)
OP2: (57.016,178.109,92.385)
C2: (59.750,183.981,93.215)
C1': (58.927,182.806,95.201)
C3': (56.731,182.038,95.587)
O5': (57.275,179.427,94.490)
O4': (59.000,181.469,95.668)
C5': (57.449,179.611,95.908)
P: (57.199,177.970,93.855)
C4': (57.712,181.067,96.213)
C2': (57.532,183.332,95.537)
O2': (57.595,184.000,96.778)
N1: (59.230,182.816,93.761)
O4: (60.171,182.931,89.853)
O2: (59.950,184.990,93.862)
C6: (59.016,181.702,92.974)
C5: (59.301,181.673,91.670)
O3': (55.538,182.138,96.348)
C2: (57.087,187.489,92.217)
OP1: (53.099,182.599,96.622)
OP2: (54.091,182.185,94.286)
C4: (57.127,185.522,90.982)
O5': (54.540,184.284,95.496)
C3': (53.819,186.990,95.102)
C1': (56.000,187.586,94.428)
O4': (56.112,186.729,95.550)
C5': (54.639,185.153,96.637)
P: (54.220,182.737,95.663)
O2: (57.370,188.681,92.367)
C4': (54.811,186.573,96.175)
C2': (54.565,188.114,94.393)
O2': (54.541,189.334,95.102)
N1: (56.379,186.832,93.223)
N3: (57.447,186.810,91.107)
N4: (57.505,184.890,89.871)
C6: (56.052,185.512,93.084)
C5: (56.405,184.825,91.991)
O3': (52.566,187.365,95.681)
OP1: (53.099,182.599,96.622)
OP2: (54.091,182.185,94.286)
C4: (57.127,185.522,90.982)
O5': (54.540,184.284,95.496)
C3': (53.819,186.990,95.102)
C1': (56.000,187.586,94.428)
O4': (56.112,186.729,95.550)
C5': (54.639,185.153,96.637)
P: (54.220,182.737,95.663)
O2: (57.370,188.681,92.367)
C4': (54.811,186.573,96.175)
C2': (54.565,188.114,94.393)
O2': (54.541,189.334,95.102)
N1: (56.379,186.832,93.223)
N3: (57.447,186.810,91.107)
N4: (57.505,184.890,89.871)
C6: (56.052,185.512,93.084)
C5: (56.405,184.825,91.991)
O3': (52.566,187.365,95.681)
Image (generated by PyMOL):