Doublet info:
Details
Nucleotide types:
UC
Description:
None: None
Program used:
None
Has errors:
False
Source
PDB id:
1VQL:0572:0573
Extra
PDB:
ATOM 1 O3' G A 571 0.350 82.360 120.034 1.00 72.59 O
ATOM 2 P U A 572 -0.711 82.684 118.869 1.00 73.28 P
ATOM 3 OP1 U A 572 -0.395 81.798 117.724 1.00 72.38 O
ATOM 4 OP2 U A 572 -0.800 84.155 118.659 1.00 72.48 O
ATOM 5 O5' U A 572 -2.103 82.220 119.488 1.00 74.63 O
ATOM 6 C5' U A 572 -2.397 80.827 119.713 1.00 73.37 C
ATOM 7 C4' U A 572 -3.802 80.681 120.242 1.00 72.76 C
ATOM 8 O4' U A 572 -3.885 81.248 121.577 1.00 71.16 O
ATOM 9 C3' U A 572 -4.852 81.443 119.453 1.00 72.32 C
ATOM 10 O3' U A 572 -5.262 80.716 118.303 1.00 72.59 O
ATOM 11 C2' U A 572 -5.961 81.626 120.481 1.00 71.94 C
ATOM 12 O2' U A 572 -6.742 80.459 120.661 1.00 74.36 O
ATOM 13 C1' U A 572 -5.148 81.872 121.753 1.00 70.51 C
ATOM 14 N1 U A 572 -4.930 83.294 122.060 1.00 69.68 N
ATOM 15 C2 U A 572 -5.928 83.970 122.749 1.00 69.72 C
ATOM 16 O2 U A 572 -6.971 83.445 123.098 1.00 70.38 O
ATOM 17 N3 U A 572 -5.657 85.290 123.016 1.00 69.61 N
ATOM 18 C4 U A 572 -4.520 85.992 122.673 1.00 69.19 C
ATOM 19 O4 U A 572 -4.422 87.179 122.990 1.00 68.51 O
ATOM 20 C5 U A 572 -3.541 85.229 121.958 1.00 69.58 C
ATOM 21 C6 U A 572 -3.773 83.941 121.683 1.00 70.05 C
ATOM 22 P C A 573 -5.759 81.508 116.996 1.00 73.60 P
ATOM 23 OP1 C A 573 -6.111 80.486 115.970 1.00 71.74 O
ATOM 24 OP2 C A 573 -4.735 82.539 116.684 1.00 74.87 O
ATOM 25 O5' C A 573 -7.091 82.252 117.469 1.00 71.34 O
TER
ATOM 1 O3' U B 572 -5.262 80.716 118.303 1.00 72.59 O
ATOM 2 P C B 573 -5.759 81.508 116.996 1.00 73.60 P
ATOM 3 OP1 C B 573 -6.111 80.486 115.970 1.00 71.74 O
ATOM 4 OP2 C B 573 -4.735 82.539 116.684 1.00 74.87 O
ATOM 5 O5' C B 573 -7.091 82.252 117.469 1.00 71.34 O
ATOM 6 C5' C B 573 -8.275 81.497 117.799 1.00 69.39 C
ATOM 7 C4' C B 573 -9.375 82.408 118.302 1.00 68.14 C
ATOM 8 O4' C B 573 -8.973 83.040 119.540 1.00 67.12 O
ATOM 9 C3' C B 573 -9.747 83.582 117.417 1.00 68.44 C
ATOM 10 O3' C B 573 -10.596 83.176 116.351 1.00 69.70 O
ATOM 11 C2' C B 573 -10.460 84.511 118.394 1.00 69.09 C
ATOM 12 O2' C B 573 -11.814 84.177 118.621 1.00 71.50 O
ATOM 13 C1' C B 573 -9.666 84.271 119.681 1.00 68.75 C
ATOM 14 N1 C B 573 -8.701 85.342 119.985 1.00 70.32 N
ATOM 15 C2 C B 573 -9.145 86.462 120.700 1.00 71.32 C
ATOM 16 O2 C B 573 -10.335 86.518 121.057 1.00 70.98 O
ATOM 17 N3 C B 573 -8.269 87.456 120.981 1.00 71.75 N
ATOM 18 C4 C B 573 -7.000 87.361 120.580 1.00 71.38 C
ATOM 19 N4 C B 573 -6.171 88.364 120.884 1.00 71.40 N
ATOM 20 C5 C B 573 -6.522 86.233 119.851 1.00 70.70 C
ATOM 21 C6 C B 573 -7.396 85.257 119.579 1.00 70.96 C
ATOM 22 P C B 574 -10.505 83.924 114.931 1.00 69.70 P
ATOM 23 OP1 C B 574 -11.372 83.198 113.968 1.00 69.18 O
ATOM 24 OP2 C B 574 -9.063 84.106 114.618 1.00 71.79 O
ATOM 25 O5' C B 574 -11.127 85.363 115.216 1.00 67.42 O
TER
ATOM 2 P U A 572 -0.711 82.684 118.869 1.00 73.28 P
ATOM 3 OP1 U A 572 -0.395 81.798 117.724 1.00 72.38 O
ATOM 4 OP2 U A 572 -0.800 84.155 118.659 1.00 72.48 O
ATOM 5 O5' U A 572 -2.103 82.220 119.488 1.00 74.63 O
ATOM 6 C5' U A 572 -2.397 80.827 119.713 1.00 73.37 C
ATOM 7 C4' U A 572 -3.802 80.681 120.242 1.00 72.76 C
ATOM 8 O4' U A 572 -3.885 81.248 121.577 1.00 71.16 O
ATOM 9 C3' U A 572 -4.852 81.443 119.453 1.00 72.32 C
ATOM 10 O3' U A 572 -5.262 80.716 118.303 1.00 72.59 O
ATOM 11 C2' U A 572 -5.961 81.626 120.481 1.00 71.94 C
ATOM 12 O2' U A 572 -6.742 80.459 120.661 1.00 74.36 O
ATOM 13 C1' U A 572 -5.148 81.872 121.753 1.00 70.51 C
ATOM 14 N1 U A 572 -4.930 83.294 122.060 1.00 69.68 N
ATOM 15 C2 U A 572 -5.928 83.970 122.749 1.00 69.72 C
ATOM 16 O2 U A 572 -6.971 83.445 123.098 1.00 70.38 O
ATOM 17 N3 U A 572 -5.657 85.290 123.016 1.00 69.61 N
ATOM 18 C4 U A 572 -4.520 85.992 122.673 1.00 69.19 C
ATOM 19 O4 U A 572 -4.422 87.179 122.990 1.00 68.51 O
ATOM 20 C5 U A 572 -3.541 85.229 121.958 1.00 69.58 C
ATOM 21 C6 U A 572 -3.773 83.941 121.683 1.00 70.05 C
ATOM 22 P C A 573 -5.759 81.508 116.996 1.00 73.60 P
ATOM 23 OP1 C A 573 -6.111 80.486 115.970 1.00 71.74 O
ATOM 24 OP2 C A 573 -4.735 82.539 116.684 1.00 74.87 O
ATOM 25 O5' C A 573 -7.091 82.252 117.469 1.00 71.34 O
TER
ATOM 1 O3' U B 572 -5.262 80.716 118.303 1.00 72.59 O
ATOM 2 P C B 573 -5.759 81.508 116.996 1.00 73.60 P
ATOM 3 OP1 C B 573 -6.111 80.486 115.970 1.00 71.74 O
ATOM 4 OP2 C B 573 -4.735 82.539 116.684 1.00 74.87 O
ATOM 5 O5' C B 573 -7.091 82.252 117.469 1.00 71.34 O
ATOM 6 C5' C B 573 -8.275 81.497 117.799 1.00 69.39 C
ATOM 7 C4' C B 573 -9.375 82.408 118.302 1.00 68.14 C
ATOM 8 O4' C B 573 -8.973 83.040 119.540 1.00 67.12 O
ATOM 9 C3' C B 573 -9.747 83.582 117.417 1.00 68.44 C
ATOM 10 O3' C B 573 -10.596 83.176 116.351 1.00 69.70 O
ATOM 11 C2' C B 573 -10.460 84.511 118.394 1.00 69.09 C
ATOM 12 O2' C B 573 -11.814 84.177 118.621 1.00 71.50 O
ATOM 13 C1' C B 573 -9.666 84.271 119.681 1.00 68.75 C
ATOM 14 N1 C B 573 -8.701 85.342 119.985 1.00 70.32 N
ATOM 15 C2 C B 573 -9.145 86.462 120.700 1.00 71.32 C
ATOM 16 O2 C B 573 -10.335 86.518 121.057 1.00 70.98 O
ATOM 17 N3 C B 573 -8.269 87.456 120.981 1.00 71.75 N
ATOM 18 C4 C B 573 -7.000 87.361 120.580 1.00 71.38 C
ATOM 19 N4 C B 573 -6.171 88.364 120.884 1.00 71.40 N
ATOM 20 C5 C B 573 -6.522 86.233 119.851 1.00 70.70 C
ATOM 21 C6 C B 573 -7.396 85.257 119.579 1.00 70.96 C
ATOM 22 P C B 574 -10.505 83.924 114.931 1.00 69.70 P
ATOM 23 OP1 C B 574 -11.372 83.198 113.968 1.00 69.18 O
ATOM 24 OP2 C B 574 -9.063 84.106 114.618 1.00 71.79 O
ATOM 25 O5' C B 574 -11.127 85.363 115.216 1.00 67.42 O
TER
Atoms:
C4: (-4.520,85.992,122.673)
N3: (-5.657,85.290,123.016)
OP1: (-0.395,81.798,117.724)
OP2: (-0.800,84.155,118.659)
C2: (-5.928,83.970,122.749)
C1': (-5.148,81.872,121.753)
C3': (-4.852,81.443,119.453)
O5': (-2.103,82.220,119.488)
O4': (-3.885,81.248,121.577)
C5': (-2.397,80.827,119.713)
P: (-0.711,82.684,118.869)
C4': (-3.802,80.681,120.242)
C2': (-5.961,81.626,120.481)
O2': (-6.742,80.459,120.661)
N1: (-4.930,83.294,122.060)
O4: (-4.422,87.179,122.990)
O2: (-6.971,83.445,123.098)
C6: (-3.773,83.941,121.683)
C5: (-3.541,85.229,121.958)
O3': (-5.262,80.716,118.303)
N3: (-5.657,85.290,123.016)
OP1: (-0.395,81.798,117.724)
OP2: (-0.800,84.155,118.659)
C2: (-5.928,83.970,122.749)
C1': (-5.148,81.872,121.753)
C3': (-4.852,81.443,119.453)
O5': (-2.103,82.220,119.488)
O4': (-3.885,81.248,121.577)
C5': (-2.397,80.827,119.713)
P: (-0.711,82.684,118.869)
C4': (-3.802,80.681,120.242)
C2': (-5.961,81.626,120.481)
O2': (-6.742,80.459,120.661)
N1: (-4.930,83.294,122.060)
O4: (-4.422,87.179,122.990)
O2: (-6.971,83.445,123.098)
C6: (-3.773,83.941,121.683)
C5: (-3.541,85.229,121.958)
O3': (-5.262,80.716,118.303)
C2: (-9.145,86.462,120.700)
OP1: (-6.111,80.486,115.970)
OP2: (-4.735,82.539,116.684)
C4: (-7.000,87.361,120.580)
O5': (-7.091,82.252,117.469)
C3': (-9.747,83.582,117.417)
C1': (-9.666,84.271,119.681)
O4': (-8.973,83.040,119.540)
C5': (-8.275,81.497,117.799)
P: (-5.759,81.508,116.996)
O2: (-10.335,86.518,121.057)
C4': (-9.375,82.408,118.302)
C2': (-10.460,84.511,118.394)
O2': (-11.814,84.177,118.621)
N1: (-8.701,85.342,119.985)
N3: (-8.269,87.456,120.981)
N4: (-6.171,88.364,120.884)
C6: (-7.396,85.257,119.579)
C5: (-6.522,86.233,119.851)
O3': (-10.596,83.176,116.351)
OP1: (-6.111,80.486,115.970)
OP2: (-4.735,82.539,116.684)
C4: (-7.000,87.361,120.580)
O5': (-7.091,82.252,117.469)
C3': (-9.747,83.582,117.417)
C1': (-9.666,84.271,119.681)
O4': (-8.973,83.040,119.540)
C5': (-8.275,81.497,117.799)
P: (-5.759,81.508,116.996)
O2: (-10.335,86.518,121.057)
C4': (-9.375,82.408,118.302)
C2': (-10.460,84.511,118.394)
O2': (-11.814,84.177,118.621)
N1: (-8.701,85.342,119.985)
N3: (-8.269,87.456,120.981)
N4: (-6.171,88.364,120.884)
C6: (-7.396,85.257,119.579)
C5: (-6.522,86.233,119.851)
O3': (-10.596,83.176,116.351)
Image (generated by PyMOL):