ClaRNA

Doublet info:

Details

Nucleotide types: UC
Description: None: None
Program used: None
Has errors: False

Source

PDB id: 4TNA:A11:A12

Extra

PDB:
ATOM 1 O3' C A 10 34.085 -3.176 25.844 1.00 0.00 O
ATOM 2 P U A 11 34.783 -3.267 27.298 1.00 0.00 P
ATOM 3 OP1 U A 11 34.001 -4.179 28.122 1.00 0.00 O
ATOM 4 OP2 U A 11 34.934 -1.888 27.776 1.00 0.00 O
ATOM 5 O5' U A 11 36.212 -3.940 27.034 1.00 0.00 O
ATOM 6 C5' U A 11 36.395 -5.332 27.273 1.00 0.00 C
ATOM 7 C4' U A 11 37.888 -5.609 27.068 1.00 0.00 C
ATOM 8 O4' U A 11 38.247 -4.914 25.885 1.00 0.00 O
ATOM 9 C3' U A 11 38.732 -4.877 28.107 1.00 0.00 C
ATOM 10 O3' U A 11 38.938 -5.638 29.283 1.00 0.00 O
ATOM 11 C2' U A 11 40.047 -4.884 27.363 1.00 0.00 C
ATOM 12 O2' U A 11 40.515 -6.205 27.345 1.00 0.00 O
ATOM 13 C1' U A 11 39.627 -4.594 25.946 1.00 0.00 C
ATOM 14 N1 U A 11 39.843 -3.171 25.604 1.00 0.00 N
ATOM 15 C2 U A 11 41.002 -2.817 25.048 1.00 0.00 C
ATOM 16 O2 U A 11 41.962 -3.600 25.151 1.00 0.00 O
ATOM 17 N3 U A 11 41.235 -1.547 24.683 1.00 0.00 N
ATOM 18 C4 U A 11 40.335 -0.603 24.898 1.00 0.00 C
ATOM 19 O4 U A 11 40.543 0.568 24.525 1.00 0.00 O
ATOM 20 C5 U A 11 39.141 -0.939 25.528 1.00 0.00 C
ATOM 21 C6 U A 11 38.923 -2.263 25.882 1.00 0.00 C
ATOM 22 P C A 12 39.176 -4.864 30.657 1.00 0.00 P
ATOM 23 OP1 C A 12 39.427 -5.838 31.740 1.00 0.00 O
ATOM 24 OP2 C A 12 38.024 -3.940 30.762 1.00 0.00 O
ATOM 25 O5' C A 12 40.498 -4.001 30.449 1.00 0.00 O
TER

ATOM 1 O3' U B 11 38.938 -5.638 29.283 1.00 0.00 O
ATOM 2 P C B 12 39.176 -4.864 30.657 1.00 0.00 P
ATOM 3 OP1 C B 12 39.427 -5.838 31.740 1.00 0.00 O
ATOM 4 OP2 C B 12 38.024 -3.940 30.762 1.00 0.00 O
ATOM 5 O5' C B 12 40.498 -4.001 30.449 1.00 0.00 O
ATOM 6 C5' C B 12 41.734 -4.546 30.868 1.00 0.00 C
ATOM 7 C4' C B 12 42.875 -3.866 30.117 1.00 0.00 C
ATOM 8 O4' C B 12 42.391 -3.180 28.982 1.00 0.00 O
ATOM 9 C3' C B 12 43.615 -2.756 30.849 1.00 0.00 C
ATOM 10 O3' C B 12 44.491 -3.300 31.817 1.00 0.00 O
ATOM 11 C2' C B 12 44.472 -2.320 29.664 1.00 0.00 C
ATOM 12 O2' C B 12 45.453 -3.307 29.490 1.00 0.00 O
ATOM 13 C1' C B 12 43.504 -2.435 28.483 1.00 0.00 C
ATOM 14 N1 C B 12 43.017 -1.099 28.151 1.00 0.00 N
ATOM 15 C2 C B 12 43.798 -0.257 27.476 1.00 0.00 C
ATOM 16 O2 C B 12 44.959 -0.597 27.203 1.00 0.00 O
ATOM 17 N3 C B 12 43.373 0.964 27.144 1.00 0.00 N
ATOM 18 C4 C B 12 42.163 1.383 27.539 1.00 0.00 C
ATOM 19 N4 C B 12 41.621 2.503 27.033 1.00 0.00 N
ATOM 20 C5 C B 12 41.377 0.545 28.311 1.00 0.00 C
ATOM 21 C6 C B 12 41.847 -0.715 28.614 1.00 0.00 C
ATOM 22 P A B 13 45.320 -2.380 32.826 1.00 0.00 P
ATOM 23 OP1 A B 13 45.945 -3.316 33.790 1.00 0.00 O
ATOM 24 OP2 A B 13 44.464 -1.295 33.340 1.00 0.00 O
ATOM 25 O5' A B 13 46.448 -1.667 31.967 1.00 0.00 O
TER

Atoms:
C4: (40.335,-0.603,24.898)
N3: (41.235,-1.547,24.683)
OP1: (34.001,-4.179,28.122)
OP2: (34.934,-1.888,27.776)
C2: (41.002,-2.817,25.048)
C1': (39.627,-4.594,25.946)
C3': (38.732,-4.877,28.107)
O5': (36.212,-3.940,27.034)
O4': (38.247,-4.914,25.885)
C5': (36.395,-5.332,27.273)
P: (34.783,-3.267,27.298)
C4': (37.888,-5.609,27.068)
C2': (40.047,-4.884,27.363)
O2': (40.515,-6.205,27.345)
N1: (39.843,-3.171,25.604)
O4: (40.543,0.568,24.525)
O2: (41.962,-3.600,25.151)
C6: (38.923,-2.263,25.882)
C5: (39.141,-0.939,25.528)
O3': (38.938,-5.638,29.283)
C2: (43.798,-0.257,27.476)
OP1: (39.427,-5.838,31.740)
OP2: (38.024,-3.940,30.762)
C4: (42.163,1.383,27.539)
O5': (40.498,-4.001,30.449)
C3': (43.615,-2.756,30.849)
C1': (43.504,-2.435,28.483)
O4': (42.391,-3.180,28.982)
C5': (41.734,-4.546,30.868)
P: (39.176,-4.864,30.657)
O2: (44.959,-0.597,27.203)
C4': (42.875,-3.866,30.117)
C2': (44.472,-2.320,29.664)
O2': (45.453,-3.307,29.490)
N1: (43.017,-1.099,28.151)
N3: (43.373,0.964,27.144)
N4: (41.621,2.503,27.033)
C6: (41.847,-0.715,28.614)
C5: (41.377,0.545,28.311)
O3': (44.491,-3.300,31.817)
Image (generated by PyMOL):
PyMOL image
show in jmol