Doublet info:
Details
Nucleotide types:
UC
Description:
None: None
Program used:
None
Has errors:
False
Source
PDB id:
1YJ9:02340:02341
Extra
PDB:
ATOM 1 O3' C A2339 66.605 108.934 134.534 1.00 48.76 O
ATOM 2 P U A2340 66.872 107.838 135.678 1.00 49.05 P
ATOM 3 OP1 U A2340 66.978 108.659 136.908 1.00 48.96 O
ATOM 4 OP2 U A2340 67.981 106.932 135.294 1.00 47.12 O
ATOM 5 O5' U A2340 65.531 106.980 135.727 1.00 46.64 O
ATOM 6 C5' U A2340 64.287 107.612 136.037 1.00 45.80 C
ATOM 7 C4' U A2340 63.147 106.631 135.942 1.00 47.06 C
ATOM 8 O4' U A2340 63.074 106.087 134.602 1.00 46.39 O
ATOM 9 C3' U A2340 63.198 105.378 136.800 1.00 47.66 C
ATOM 10 O3' U A2340 62.855 105.644 138.157 1.00 49.62 O
ATOM 11 C2' U A2340 62.149 104.510 136.114 1.00 45.90 C
ATOM 12 O2' U A2340 60.836 104.948 136.391 1.00 44.42 O
ATOM 13 C1' U A2340 62.427 104.823 134.647 1.00 45.04 C
ATOM 14 N1 U A2340 63.289 103.829 134.000 1.00 43.58 N
ATOM 15 C2 U A2340 62.719 102.634 133.629 1.00 45.16 C
ATOM 16 O2 U A2340 61.548 102.372 133.832 1.00 46.79 O
ATOM 17 N3 U A2340 63.572 101.756 133.012 1.00 44.90 N
ATOM 18 C4 U A2340 64.904 101.958 132.739 1.00 44.29 C
ATOM 19 O4 U A2340 65.536 101.098 132.143 1.00 47.13 O
ATOM 20 C5 U A2340 65.414 103.211 133.161 1.00 43.45 C
ATOM 21 C6 U A2340 64.613 104.080 133.762 1.00 43.89 C
ATOM 22 P C A2341 63.325 104.627 139.307 1.00 50.16 P
ATOM 23 OP1 C A2341 62.976 105.247 140.607 1.00 49.44 O
ATOM 24 OP2 C A2341 64.736 104.252 139.025 1.00 48.51 O
ATOM 25 O5' C A2341 62.412 103.333 139.086 1.00 49.50 O
TER
ATOM 1 O3' U B2340 62.855 105.644 138.157 1.00 49.62 O
ATOM 2 P C B2341 63.325 104.627 139.307 1.00 50.16 P
ATOM 3 OP1 C B2341 62.976 105.247 140.607 1.00 49.44 O
ATOM 4 OP2 C B2341 64.736 104.252 139.025 1.00 48.51 O
ATOM 5 O5' C B2341 62.412 103.333 139.086 1.00 49.50 O
ATOM 6 C5' C B2341 60.967 103.399 139.210 1.00 48.12 C
ATOM 7 C4' C B2341 60.325 102.104 138.733 1.00 47.18 C
ATOM 8 O4' C B2341 60.643 101.878 137.331 1.00 45.70 O
ATOM 9 C3' C B2341 60.802 100.825 139.402 1.00 47.53 C
ATOM 10 O3' C B2341 60.209 100.586 140.667 1.00 49.79 O
ATOM 11 C2' C B2341 60.420 99.768 138.381 1.00 45.20 C
ATOM 12 O2' C B2341 59.035 99.487 138.378 1.00 44.70 O
ATOM 13 C1' C B2341 60.783 100.485 137.087 1.00 43.73 C
ATOM 14 N1 C B2341 62.168 100.204 136.650 1.00 42.81 N
ATOM 15 C2 C B2341 62.453 98.958 136.077 1.00 43.82 C
ATOM 16 O2 C B2341 61.559 98.104 136.021 1.00 45.15 O
ATOM 17 N3 C B2341 63.699 98.708 135.610 1.00 42.58 N
ATOM 18 C4 C B2341 64.646 99.634 135.720 1.00 41.78 C
ATOM 19 N4 C B2341 65.848 99.352 135.227 1.00 40.18 N
ATOM 20 C5 C B2341 64.399 100.894 136.336 1.00 42.38 C
ATOM 21 C6 C B2341 63.156 101.137 136.781 1.00 42.25 C
ATOM 22 P G B2342 60.962 99.631 141.719 1.00 51.45 P
ATOM 23 OP1 G B2342 60.155 99.650 142.957 1.00 52.31 O
ATOM 24 OP2 G B2342 62.408 99.993 141.769 1.00 50.65 O
ATOM 25 O5' G B2342 60.849 98.181 141.081 1.00 50.14 O
TER
ATOM 2 P U A2340 66.872 107.838 135.678 1.00 49.05 P
ATOM 3 OP1 U A2340 66.978 108.659 136.908 1.00 48.96 O
ATOM 4 OP2 U A2340 67.981 106.932 135.294 1.00 47.12 O
ATOM 5 O5' U A2340 65.531 106.980 135.727 1.00 46.64 O
ATOM 6 C5' U A2340 64.287 107.612 136.037 1.00 45.80 C
ATOM 7 C4' U A2340 63.147 106.631 135.942 1.00 47.06 C
ATOM 8 O4' U A2340 63.074 106.087 134.602 1.00 46.39 O
ATOM 9 C3' U A2340 63.198 105.378 136.800 1.00 47.66 C
ATOM 10 O3' U A2340 62.855 105.644 138.157 1.00 49.62 O
ATOM 11 C2' U A2340 62.149 104.510 136.114 1.00 45.90 C
ATOM 12 O2' U A2340 60.836 104.948 136.391 1.00 44.42 O
ATOM 13 C1' U A2340 62.427 104.823 134.647 1.00 45.04 C
ATOM 14 N1 U A2340 63.289 103.829 134.000 1.00 43.58 N
ATOM 15 C2 U A2340 62.719 102.634 133.629 1.00 45.16 C
ATOM 16 O2 U A2340 61.548 102.372 133.832 1.00 46.79 O
ATOM 17 N3 U A2340 63.572 101.756 133.012 1.00 44.90 N
ATOM 18 C4 U A2340 64.904 101.958 132.739 1.00 44.29 C
ATOM 19 O4 U A2340 65.536 101.098 132.143 1.00 47.13 O
ATOM 20 C5 U A2340 65.414 103.211 133.161 1.00 43.45 C
ATOM 21 C6 U A2340 64.613 104.080 133.762 1.00 43.89 C
ATOM 22 P C A2341 63.325 104.627 139.307 1.00 50.16 P
ATOM 23 OP1 C A2341 62.976 105.247 140.607 1.00 49.44 O
ATOM 24 OP2 C A2341 64.736 104.252 139.025 1.00 48.51 O
ATOM 25 O5' C A2341 62.412 103.333 139.086 1.00 49.50 O
TER
ATOM 1 O3' U B2340 62.855 105.644 138.157 1.00 49.62 O
ATOM 2 P C B2341 63.325 104.627 139.307 1.00 50.16 P
ATOM 3 OP1 C B2341 62.976 105.247 140.607 1.00 49.44 O
ATOM 4 OP2 C B2341 64.736 104.252 139.025 1.00 48.51 O
ATOM 5 O5' C B2341 62.412 103.333 139.086 1.00 49.50 O
ATOM 6 C5' C B2341 60.967 103.399 139.210 1.00 48.12 C
ATOM 7 C4' C B2341 60.325 102.104 138.733 1.00 47.18 C
ATOM 8 O4' C B2341 60.643 101.878 137.331 1.00 45.70 O
ATOM 9 C3' C B2341 60.802 100.825 139.402 1.00 47.53 C
ATOM 10 O3' C B2341 60.209 100.586 140.667 1.00 49.79 O
ATOM 11 C2' C B2341 60.420 99.768 138.381 1.00 45.20 C
ATOM 12 O2' C B2341 59.035 99.487 138.378 1.00 44.70 O
ATOM 13 C1' C B2341 60.783 100.485 137.087 1.00 43.73 C
ATOM 14 N1 C B2341 62.168 100.204 136.650 1.00 42.81 N
ATOM 15 C2 C B2341 62.453 98.958 136.077 1.00 43.82 C
ATOM 16 O2 C B2341 61.559 98.104 136.021 1.00 45.15 O
ATOM 17 N3 C B2341 63.699 98.708 135.610 1.00 42.58 N
ATOM 18 C4 C B2341 64.646 99.634 135.720 1.00 41.78 C
ATOM 19 N4 C B2341 65.848 99.352 135.227 1.00 40.18 N
ATOM 20 C5 C B2341 64.399 100.894 136.336 1.00 42.38 C
ATOM 21 C6 C B2341 63.156 101.137 136.781 1.00 42.25 C
ATOM 22 P G B2342 60.962 99.631 141.719 1.00 51.45 P
ATOM 23 OP1 G B2342 60.155 99.650 142.957 1.00 52.31 O
ATOM 24 OP2 G B2342 62.408 99.993 141.769 1.00 50.65 O
ATOM 25 O5' G B2342 60.849 98.181 141.081 1.00 50.14 O
TER
Atoms:
C4: (64.904,101.958,132.739)
N3: (63.572,101.756,133.012)
OP1: (66.978,108.659,136.908)
OP2: (67.981,106.932,135.294)
C2: (62.719,102.634,133.629)
C1': (62.427,104.823,134.647)
C3': (63.198,105.378,136.800)
O5': (65.531,106.980,135.727)
O4': (63.074,106.087,134.602)
C5': (64.287,107.612,136.037)
P: (66.872,107.838,135.678)
C4': (63.147,106.631,135.942)
C2': (62.149,104.510,136.114)
O2': (60.836,104.948,136.391)
N1: (63.289,103.829,134.000)
O4: (65.536,101.098,132.143)
O2: (61.548,102.372,133.832)
C6: (64.613,104.080,133.762)
C5: (65.414,103.211,133.161)
O3': (62.855,105.644,138.157)
N3: (63.572,101.756,133.012)
OP1: (66.978,108.659,136.908)
OP2: (67.981,106.932,135.294)
C2: (62.719,102.634,133.629)
C1': (62.427,104.823,134.647)
C3': (63.198,105.378,136.800)
O5': (65.531,106.980,135.727)
O4': (63.074,106.087,134.602)
C5': (64.287,107.612,136.037)
P: (66.872,107.838,135.678)
C4': (63.147,106.631,135.942)
C2': (62.149,104.510,136.114)
O2': (60.836,104.948,136.391)
N1: (63.289,103.829,134.000)
O4: (65.536,101.098,132.143)
O2: (61.548,102.372,133.832)
C6: (64.613,104.080,133.762)
C5: (65.414,103.211,133.161)
O3': (62.855,105.644,138.157)
C2: (62.453,98.958,136.077)
OP1: (62.976,105.247,140.607)
OP2: (64.736,104.252,139.025)
C4: (64.646,99.634,135.720)
O5': (62.412,103.333,139.086)
C3': (60.802,100.825,139.402)
C1': (60.783,100.485,137.087)
O4': (60.643,101.878,137.331)
C5': (60.967,103.399,139.210)
P: (63.325,104.627,139.307)
O2: (61.559,98.104,136.021)
C4': (60.325,102.104,138.733)
C2': (60.420,99.768,138.381)
O2': (59.035,99.487,138.378)
N1: (62.168,100.204,136.650)
N3: (63.699,98.708,135.610)
N4: (65.848,99.352,135.227)
C6: (63.156,101.137,136.781)
C5: (64.399,100.894,136.336)
O3': (60.209,100.586,140.667)
OP1: (62.976,105.247,140.607)
OP2: (64.736,104.252,139.025)
C4: (64.646,99.634,135.720)
O5': (62.412,103.333,139.086)
C3': (60.802,100.825,139.402)
C1': (60.783,100.485,137.087)
O4': (60.643,101.878,137.331)
C5': (60.967,103.399,139.210)
P: (63.325,104.627,139.307)
O2: (61.559,98.104,136.021)
C4': (60.325,102.104,138.733)
C2': (60.420,99.768,138.381)
O2': (59.035,99.487,138.378)
N1: (62.168,100.204,136.650)
N3: (63.699,98.708,135.610)
N4: (65.848,99.352,135.227)
C6: (63.156,101.137,136.781)
C5: (64.399,100.894,136.336)
O3': (60.209,100.586,140.667)
Image (generated by PyMOL):