Doublet info:
Details
Nucleotide types:
UC
Description:
None: None
Program used:
None
Has errors:
False
Source
PDB id:
1KD1:A298:A299
Extra
PDB:
ATOM 1 O3' C A 297 0.208 145.954 33.605 1.00 65.37 O
ATOM 2 P U A 298 0.049 146.364 35.132 1.00 67.98 P
ATOM 3 OP1 U A 298 -0.274 147.815 35.174 1.00 67.85 O
ATOM 4 OP2 U A 298 1.239 145.855 35.862 1.00 67.71 O
ATOM 5 O5' U A 298 -1.219 145.525 35.613 1.00 68.38 O
ATOM 6 C5' U A 298 -2.496 145.668 34.960 1.00 68.11 C
ATOM 7 C4' U A 298 -3.504 144.728 35.569 1.00 68.04 C
ATOM 8 O4' U A 298 -3.216 143.357 35.198 1.00 67.71 O
ATOM 9 C3' U A 298 -3.492 144.724 37.082 1.00 67.52 C
ATOM 10 O3' U A 298 -4.253 145.800 37.584 1.00 66.91 O
ATOM 11 C2' U A 298 -4.089 143.368 37.412 1.00 68.89 C
ATOM 12 O2' U A 298 -5.502 143.349 37.330 1.00 68.71 O
ATOM 13 C1' U A 298 -3.486 142.505 36.299 1.00 69.33 C
ATOM 14 N1 U A 298 -2.224 141.867 36.701 1.00 71.11 N
ATOM 15 C2 U A 298 -2.292 140.775 37.548 1.00 72.10 C
ATOM 16 O2 U A 298 -3.346 140.325 37.970 1.00 72.90 O
ATOM 17 N3 U A 298 -1.080 140.225 37.879 1.00 72.90 N
ATOM 18 C4 U A 298 0.164 140.640 37.460 1.00 72.63 C
ATOM 19 O4 U A 298 1.162 140.001 37.797 1.00 73.30 O
ATOM 20 C5 U A 298 0.151 141.772 36.593 1.00 72.40 C
ATOM 21 C6 U A 298 -1.010 142.333 36.251 1.00 71.92 C
ATOM 22 P C A 299 -3.745 146.587 38.879 1.00 67.01 P
ATOM 23 OP1 C A 299 -4.526 147.841 38.944 1.00 67.48 O
ATOM 24 OP2 C A 299 -2.263 146.648 38.838 1.00 68.35 O
ATOM 25 O5' C A 299 -4.202 145.649 40.080 1.00 66.66 O
TER
ATOM 1 O3' U B 298 -4.253 145.800 37.584 1.00 66.91 O
ATOM 2 P C B 299 -3.745 146.587 38.879 1.00 67.01 P
ATOM 3 OP1 C B 299 -4.526 147.841 38.944 1.00 67.48 O
ATOM 4 OP2 C B 299 -2.263 146.648 38.838 1.00 68.35 O
ATOM 5 O5' C B 299 -4.202 145.649 40.080 1.00 66.66 O
ATOM 6 C5' C B 299 -5.597 145.527 40.411 1.00 67.18 C
ATOM 7 C4' C B 299 -5.806 144.437 41.432 1.00 67.47 C
ATOM 8 O4' C B 299 -5.398 143.169 40.863 1.00 67.37 O
ATOM 9 C3' C B 299 -4.977 144.552 42.697 1.00 66.53 C
ATOM 10 O3' C B 299 -5.556 145.451 43.623 1.00 66.63 O
ATOM 11 C2' C B 299 -4.963 143.116 43.192 1.00 67.15 C
ATOM 12 O2' C B 299 -6.182 142.713 43.783 1.00 66.90 O
ATOM 13 C1' C B 299 -4.800 142.372 41.871 1.00 67.58 C
ATOM 14 N1 C B 299 -3.379 142.190 41.537 1.00 67.81 N
ATOM 15 C2 C B 299 -2.743 141.044 41.984 1.00 67.08 C
ATOM 16 O2 C B 299 -3.380 140.231 42.673 1.00 66.87 O
ATOM 17 N3 C B 299 -1.454 140.841 41.666 1.00 67.03 N
ATOM 18 C4 C B 299 -0.792 141.740 40.937 1.00 68.10 C
ATOM 19 N4 C B 299 0.482 141.481 40.634 1.00 67.97 N
ATOM 20 C5 C B 299 -1.408 142.937 40.483 1.00 68.85 C
ATOM 21 C6 C B 299 -2.692 143.121 40.802 1.00 68.63 C
ATOM 22 P U B 300 -4.614 146.223 44.664 1.00 68.07 P
ATOM 23 OP1 U B 300 -5.464 147.112 45.495 1.00 68.36 O
ATOM 24 OP2 U B 300 -3.468 146.790 43.914 1.00 68.30 O
ATOM 25 O5' U B 300 -4.096 145.059 45.610 1.00 68.64 O
TER
ATOM 2 P U A 298 0.049 146.364 35.132 1.00 67.98 P
ATOM 3 OP1 U A 298 -0.274 147.815 35.174 1.00 67.85 O
ATOM 4 OP2 U A 298 1.239 145.855 35.862 1.00 67.71 O
ATOM 5 O5' U A 298 -1.219 145.525 35.613 1.00 68.38 O
ATOM 6 C5' U A 298 -2.496 145.668 34.960 1.00 68.11 C
ATOM 7 C4' U A 298 -3.504 144.728 35.569 1.00 68.04 C
ATOM 8 O4' U A 298 -3.216 143.357 35.198 1.00 67.71 O
ATOM 9 C3' U A 298 -3.492 144.724 37.082 1.00 67.52 C
ATOM 10 O3' U A 298 -4.253 145.800 37.584 1.00 66.91 O
ATOM 11 C2' U A 298 -4.089 143.368 37.412 1.00 68.89 C
ATOM 12 O2' U A 298 -5.502 143.349 37.330 1.00 68.71 O
ATOM 13 C1' U A 298 -3.486 142.505 36.299 1.00 69.33 C
ATOM 14 N1 U A 298 -2.224 141.867 36.701 1.00 71.11 N
ATOM 15 C2 U A 298 -2.292 140.775 37.548 1.00 72.10 C
ATOM 16 O2 U A 298 -3.346 140.325 37.970 1.00 72.90 O
ATOM 17 N3 U A 298 -1.080 140.225 37.879 1.00 72.90 N
ATOM 18 C4 U A 298 0.164 140.640 37.460 1.00 72.63 C
ATOM 19 O4 U A 298 1.162 140.001 37.797 1.00 73.30 O
ATOM 20 C5 U A 298 0.151 141.772 36.593 1.00 72.40 C
ATOM 21 C6 U A 298 -1.010 142.333 36.251 1.00 71.92 C
ATOM 22 P C A 299 -3.745 146.587 38.879 1.00 67.01 P
ATOM 23 OP1 C A 299 -4.526 147.841 38.944 1.00 67.48 O
ATOM 24 OP2 C A 299 -2.263 146.648 38.838 1.00 68.35 O
ATOM 25 O5' C A 299 -4.202 145.649 40.080 1.00 66.66 O
TER
ATOM 1 O3' U B 298 -4.253 145.800 37.584 1.00 66.91 O
ATOM 2 P C B 299 -3.745 146.587 38.879 1.00 67.01 P
ATOM 3 OP1 C B 299 -4.526 147.841 38.944 1.00 67.48 O
ATOM 4 OP2 C B 299 -2.263 146.648 38.838 1.00 68.35 O
ATOM 5 O5' C B 299 -4.202 145.649 40.080 1.00 66.66 O
ATOM 6 C5' C B 299 -5.597 145.527 40.411 1.00 67.18 C
ATOM 7 C4' C B 299 -5.806 144.437 41.432 1.00 67.47 C
ATOM 8 O4' C B 299 -5.398 143.169 40.863 1.00 67.37 O
ATOM 9 C3' C B 299 -4.977 144.552 42.697 1.00 66.53 C
ATOM 10 O3' C B 299 -5.556 145.451 43.623 1.00 66.63 O
ATOM 11 C2' C B 299 -4.963 143.116 43.192 1.00 67.15 C
ATOM 12 O2' C B 299 -6.182 142.713 43.783 1.00 66.90 O
ATOM 13 C1' C B 299 -4.800 142.372 41.871 1.00 67.58 C
ATOM 14 N1 C B 299 -3.379 142.190 41.537 1.00 67.81 N
ATOM 15 C2 C B 299 -2.743 141.044 41.984 1.00 67.08 C
ATOM 16 O2 C B 299 -3.380 140.231 42.673 1.00 66.87 O
ATOM 17 N3 C B 299 -1.454 140.841 41.666 1.00 67.03 N
ATOM 18 C4 C B 299 -0.792 141.740 40.937 1.00 68.10 C
ATOM 19 N4 C B 299 0.482 141.481 40.634 1.00 67.97 N
ATOM 20 C5 C B 299 -1.408 142.937 40.483 1.00 68.85 C
ATOM 21 C6 C B 299 -2.692 143.121 40.802 1.00 68.63 C
ATOM 22 P U B 300 -4.614 146.223 44.664 1.00 68.07 P
ATOM 23 OP1 U B 300 -5.464 147.112 45.495 1.00 68.36 O
ATOM 24 OP2 U B 300 -3.468 146.790 43.914 1.00 68.30 O
ATOM 25 O5' U B 300 -4.096 145.059 45.610 1.00 68.64 O
TER
Atoms:
C4: (0.164,140.640,37.460)
N3: (-1.080,140.225,37.879)
OP1: (-0.274,147.815,35.174)
OP2: (1.239,145.855,35.862)
C2: (-2.292,140.775,37.548)
C1': (-3.486,142.505,36.299)
C3': (-3.492,144.724,37.082)
O5': (-1.219,145.525,35.613)
O4': (-3.216,143.357,35.198)
C5': (-2.496,145.668,34.960)
P: (0.049,146.364,35.132)
C4': (-3.504,144.728,35.569)
C2': (-4.089,143.368,37.412)
O2': (-5.502,143.349,37.330)
N1: (-2.224,141.867,36.701)
O4: (1.162,140.001,37.797)
O2: (-3.346,140.325,37.970)
C6: (-1.010,142.333,36.251)
C5: (0.151,141.772,36.593)
O3': (-4.253,145.800,37.584)
N3: (-1.080,140.225,37.879)
OP1: (-0.274,147.815,35.174)
OP2: (1.239,145.855,35.862)
C2: (-2.292,140.775,37.548)
C1': (-3.486,142.505,36.299)
C3': (-3.492,144.724,37.082)
O5': (-1.219,145.525,35.613)
O4': (-3.216,143.357,35.198)
C5': (-2.496,145.668,34.960)
P: (0.049,146.364,35.132)
C4': (-3.504,144.728,35.569)
C2': (-4.089,143.368,37.412)
O2': (-5.502,143.349,37.330)
N1: (-2.224,141.867,36.701)
O4: (1.162,140.001,37.797)
O2: (-3.346,140.325,37.970)
C6: (-1.010,142.333,36.251)
C5: (0.151,141.772,36.593)
O3': (-4.253,145.800,37.584)
C2: (-2.743,141.044,41.984)
OP1: (-4.526,147.841,38.944)
OP2: (-2.263,146.648,38.838)
C4: (-0.792,141.740,40.937)
O5': (-4.202,145.649,40.080)
C3': (-4.977,144.552,42.697)
C1': (-4.800,142.372,41.871)
O4': (-5.398,143.169,40.863)
C5': (-5.597,145.527,40.411)
P: (-3.745,146.587,38.879)
O2: (-3.380,140.231,42.673)
C4': (-5.806,144.437,41.432)
C2': (-4.963,143.116,43.192)
O2': (-6.182,142.713,43.783)
N1: (-3.379,142.190,41.537)
N3: (-1.454,140.841,41.666)
N4: (0.482,141.481,40.634)
C6: (-2.692,143.121,40.802)
C5: (-1.408,142.937,40.483)
O3': (-5.556,145.451,43.623)
OP1: (-4.526,147.841,38.944)
OP2: (-2.263,146.648,38.838)
C4: (-0.792,141.740,40.937)
O5': (-4.202,145.649,40.080)
C3': (-4.977,144.552,42.697)
C1': (-4.800,142.372,41.871)
O4': (-5.398,143.169,40.863)
C5': (-5.597,145.527,40.411)
P: (-3.745,146.587,38.879)
O2: (-3.380,140.231,42.673)
C4': (-5.806,144.437,41.432)
C2': (-4.963,143.116,43.192)
O2': (-6.182,142.713,43.783)
N1: (-3.379,142.190,41.537)
N3: (-1.454,140.841,41.666)
N4: (0.482,141.481,40.634)
C6: (-2.692,143.121,40.802)
C5: (-1.408,142.937,40.483)
O3': (-5.556,145.451,43.623)
Image (generated by PyMOL):