Doublet info:
Details
Nucleotide types:
UC
Description:
None: None
Program used:
None
Has errors:
False
Source
PDB id:
1JBT:D3:D4
Extra
PDB:
ATOM 1 O3' C A 2 -2.283 50.848 8.610 1.00 28.23 O
ATOM 2 P U A 3 -2.904 49.787 7.568 1.00 35.79 P
ATOM 3 OP1 U A 3 -4.369 49.999 7.625 1.00 35.54 O
ATOM 4 OP2 U A 3 -2.366 48.420 7.773 1.00 29.17 O
ATOM 5 O5' U A 3 -2.366 50.292 6.153 1.00 36.95 O
ATOM 6 C5' U A 3 -2.915 51.445 5.527 1.00 28.22 C
ATOM 7 C4' U A 3 -2.214 51.716 4.221 1.00 27.44 C
ATOM 8 O4' U A 3 -0.815 52.001 4.472 1.00 30.85 O
ATOM 9 C3' U A 3 -2.159 50.583 3.211 1.00 26.02 C
ATOM 10 O3' U A 3 -3.380 50.429 2.507 1.00 31.39 O
ATOM 11 C2' U A 3 -1.010 51.030 2.318 1.00 28.34 C
ATOM 12 O2' U A 3 -1.311 52.064 1.393 1.00 19.62 O
ATOM 13 C1' U A 3 -0.029 51.529 3.378 1.00 28.41 C
ATOM 14 N1 U A 3 0.858 50.457 3.858 1.00 30.13 N
ATOM 15 C2 U A 3 1.847 50.023 2.994 1.00 31.15 C
ATOM 16 O2 U A 3 1.998 50.485 1.885 1.00 35.76 O
ATOM 17 N3 U A 3 2.647 49.023 3.479 1.00 34.55 N
ATOM 18 C4 U A 3 2.564 48.418 4.716 1.00 35.88 C
ATOM 19 O4 U A 3 3.362 47.520 4.997 1.00 42.77 O
ATOM 20 C5 U A 3 1.514 48.917 5.562 1.00 30.19 C
ATOM 21 C6 U A 3 0.717 49.895 5.118 1.00 27.52 C
ATOM 22 P C A 4 -3.978 48.956 2.269 1.00 29.15 P
ATOM 23 OP1 C A 4 -5.435 49.117 2.051 1.00 29.12 O
ATOM 24 OP2 C A 4 -3.498 48.069 3.355 1.00 36.06 O
ATOM 25 O5' C A 4 -3.276 48.472 0.931 1.00 23.64 O
TER
ATOM 1 O3' U B 3 -3.380 50.429 2.507 1.00 31.39 O
ATOM 2 P C B 4 -3.978 48.956 2.269 1.00 29.15 P
ATOM 3 OP1 C B 4 -5.435 49.117 2.051 1.00 29.12 O
ATOM 4 OP2 C B 4 -3.498 48.069 3.355 1.00 36.06 O
ATOM 5 O5' C B 4 -3.276 48.472 0.931 1.00 23.64 O
ATOM 6 C5' C B 4 -3.292 49.288 -0.221 1.00 24.19 C
ATOM 7 C4' C B 4 -2.183 48.893 -1.147 1.00 24.51 C
ATOM 8 O4' C B 4 -0.918 49.258 -0.546 1.00 26.92 O
ATOM 9 C3' C B 4 -1.998 47.411 -1.381 1.00 27.58 C
ATOM 10 O3' C B 4 -3.005 46.810 -2.175 1.00 31.80 O
ATOM 11 C2' C B 4 -0.581 47.383 -1.937 1.00 28.97 C
ATOM 12 O2' C B 4 -0.380 47.846 -3.261 1.00 22.61 O
ATOM 13 C1' C B 4 0.087 48.333 -0.951 1.00 28.56 C
ATOM 14 N1 C B 4 0.572 47.608 0.240 1.00 28.50 N
ATOM 15 C2 C B 4 1.785 46.898 0.151 1.00 29.79 C
ATOM 16 O2 C B 4 2.414 46.908 -0.922 1.00 30.35 O
ATOM 17 N3 C B 4 2.235 46.215 1.234 1.00 32.88 N
ATOM 18 C4 C B 4 1.526 46.219 2.364 1.00 32.02 C
ATOM 19 N4 C B 4 1.996 45.527 3.396 1.00 25.14 N
ATOM 20 C5 C B 4 0.294 46.934 2.481 1.00 32.64 C
ATOM 21 C6 C B 4 -0.140 47.610 1.408 1.00 28.36 C
ATOM 22 P C B 5 -3.405 45.276 -1.907 1.00 37.29 P
ATOM 23 OP1 C B 5 -4.698 45.006 -2.593 1.00 35.50 O
ATOM 24 OP2 C B 5 -3.286 45.009 -0.449 1.00 30.27 O
ATOM 25 O5' C B 5 -2.273 44.470 -2.688 1.00 32.88 O
TER
ATOM 2 P U A 3 -2.904 49.787 7.568 1.00 35.79 P
ATOM 3 OP1 U A 3 -4.369 49.999 7.625 1.00 35.54 O
ATOM 4 OP2 U A 3 -2.366 48.420 7.773 1.00 29.17 O
ATOM 5 O5' U A 3 -2.366 50.292 6.153 1.00 36.95 O
ATOM 6 C5' U A 3 -2.915 51.445 5.527 1.00 28.22 C
ATOM 7 C4' U A 3 -2.214 51.716 4.221 1.00 27.44 C
ATOM 8 O4' U A 3 -0.815 52.001 4.472 1.00 30.85 O
ATOM 9 C3' U A 3 -2.159 50.583 3.211 1.00 26.02 C
ATOM 10 O3' U A 3 -3.380 50.429 2.507 1.00 31.39 O
ATOM 11 C2' U A 3 -1.010 51.030 2.318 1.00 28.34 C
ATOM 12 O2' U A 3 -1.311 52.064 1.393 1.00 19.62 O
ATOM 13 C1' U A 3 -0.029 51.529 3.378 1.00 28.41 C
ATOM 14 N1 U A 3 0.858 50.457 3.858 1.00 30.13 N
ATOM 15 C2 U A 3 1.847 50.023 2.994 1.00 31.15 C
ATOM 16 O2 U A 3 1.998 50.485 1.885 1.00 35.76 O
ATOM 17 N3 U A 3 2.647 49.023 3.479 1.00 34.55 N
ATOM 18 C4 U A 3 2.564 48.418 4.716 1.00 35.88 C
ATOM 19 O4 U A 3 3.362 47.520 4.997 1.00 42.77 O
ATOM 20 C5 U A 3 1.514 48.917 5.562 1.00 30.19 C
ATOM 21 C6 U A 3 0.717 49.895 5.118 1.00 27.52 C
ATOM 22 P C A 4 -3.978 48.956 2.269 1.00 29.15 P
ATOM 23 OP1 C A 4 -5.435 49.117 2.051 1.00 29.12 O
ATOM 24 OP2 C A 4 -3.498 48.069 3.355 1.00 36.06 O
ATOM 25 O5' C A 4 -3.276 48.472 0.931 1.00 23.64 O
TER
ATOM 1 O3' U B 3 -3.380 50.429 2.507 1.00 31.39 O
ATOM 2 P C B 4 -3.978 48.956 2.269 1.00 29.15 P
ATOM 3 OP1 C B 4 -5.435 49.117 2.051 1.00 29.12 O
ATOM 4 OP2 C B 4 -3.498 48.069 3.355 1.00 36.06 O
ATOM 5 O5' C B 4 -3.276 48.472 0.931 1.00 23.64 O
ATOM 6 C5' C B 4 -3.292 49.288 -0.221 1.00 24.19 C
ATOM 7 C4' C B 4 -2.183 48.893 -1.147 1.00 24.51 C
ATOM 8 O4' C B 4 -0.918 49.258 -0.546 1.00 26.92 O
ATOM 9 C3' C B 4 -1.998 47.411 -1.381 1.00 27.58 C
ATOM 10 O3' C B 4 -3.005 46.810 -2.175 1.00 31.80 O
ATOM 11 C2' C B 4 -0.581 47.383 -1.937 1.00 28.97 C
ATOM 12 O2' C B 4 -0.380 47.846 -3.261 1.00 22.61 O
ATOM 13 C1' C B 4 0.087 48.333 -0.951 1.00 28.56 C
ATOM 14 N1 C B 4 0.572 47.608 0.240 1.00 28.50 N
ATOM 15 C2 C B 4 1.785 46.898 0.151 1.00 29.79 C
ATOM 16 O2 C B 4 2.414 46.908 -0.922 1.00 30.35 O
ATOM 17 N3 C B 4 2.235 46.215 1.234 1.00 32.88 N
ATOM 18 C4 C B 4 1.526 46.219 2.364 1.00 32.02 C
ATOM 19 N4 C B 4 1.996 45.527 3.396 1.00 25.14 N
ATOM 20 C5 C B 4 0.294 46.934 2.481 1.00 32.64 C
ATOM 21 C6 C B 4 -0.140 47.610 1.408 1.00 28.36 C
ATOM 22 P C B 5 -3.405 45.276 -1.907 1.00 37.29 P
ATOM 23 OP1 C B 5 -4.698 45.006 -2.593 1.00 35.50 O
ATOM 24 OP2 C B 5 -3.286 45.009 -0.449 1.00 30.27 O
ATOM 25 O5' C B 5 -2.273 44.470 -2.688 1.00 32.88 O
TER
Atoms:
C4: (2.564,48.418,4.716)
N3: (2.647,49.023,3.479)
OP1: (-4.369,49.999,7.625)
OP2: (-2.366,48.420,7.773)
C2: (1.847,50.023,2.994)
C1': (-0.029,51.529,3.378)
C3': (-2.159,50.583,3.211)
O5': (-2.366,50.292,6.153)
O4': (-0.815,52.001,4.472)
C5': (-2.915,51.445,5.527)
P: (-2.904,49.787,7.568)
C4': (-2.214,51.716,4.221)
C2': (-1.010,51.030,2.318)
O2': (-1.311,52.064,1.393)
N1: (0.858,50.457,3.858)
O4: (3.362,47.520,4.997)
O2: (1.998,50.485,1.885)
C6: (0.717,49.895,5.118)
C5: (1.514,48.917,5.562)
O3': (-3.380,50.429,2.507)
N3: (2.647,49.023,3.479)
OP1: (-4.369,49.999,7.625)
OP2: (-2.366,48.420,7.773)
C2: (1.847,50.023,2.994)
C1': (-0.029,51.529,3.378)
C3': (-2.159,50.583,3.211)
O5': (-2.366,50.292,6.153)
O4': (-0.815,52.001,4.472)
C5': (-2.915,51.445,5.527)
P: (-2.904,49.787,7.568)
C4': (-2.214,51.716,4.221)
C2': (-1.010,51.030,2.318)
O2': (-1.311,52.064,1.393)
N1: (0.858,50.457,3.858)
O4: (3.362,47.520,4.997)
O2: (1.998,50.485,1.885)
C6: (0.717,49.895,5.118)
C5: (1.514,48.917,5.562)
O3': (-3.380,50.429,2.507)
C2: (1.785,46.898,0.151)
OP1: (-5.435,49.117,2.051)
OP2: (-3.498,48.069,3.355)
C4: (1.526,46.219,2.364)
O5': (-3.276,48.472,0.931)
C3': (-1.998,47.411,-1.381)
C1': (0.087,48.333,-0.951)
O4': (-0.918,49.258,-0.546)
C5': (-3.292,49.288,-0.221)
P: (-3.978,48.956,2.269)
O2: (2.414,46.908,-0.922)
C4': (-2.183,48.893,-1.147)
C2': (-0.581,47.383,-1.937)
O2': (-0.380,47.846,-3.261)
N1: (0.572,47.608,0.240)
N3: (2.235,46.215,1.234)
N4: (1.996,45.527,3.396)
C6: (-0.140,47.610,1.408)
C5: (0.294,46.934,2.481)
O3': (-3.005,46.810,-2.175)
OP1: (-5.435,49.117,2.051)
OP2: (-3.498,48.069,3.355)
C4: (1.526,46.219,2.364)
O5': (-3.276,48.472,0.931)
C3': (-1.998,47.411,-1.381)
C1': (0.087,48.333,-0.951)
O4': (-0.918,49.258,-0.546)
C5': (-3.292,49.288,-0.221)
P: (-3.978,48.956,2.269)
O2: (2.414,46.908,-0.922)
C4': (-2.183,48.893,-1.147)
C2': (-0.581,47.383,-1.937)
O2': (-0.380,47.846,-3.261)
N1: (0.572,47.608,0.240)
N3: (2.235,46.215,1.234)
N4: (1.996,45.527,3.396)
C6: (-0.140,47.610,1.408)
C5: (0.294,46.934,2.481)
O3': (-3.005,46.810,-2.175)
Image (generated by PyMOL):